Cuculus canorus (common cuckoo): 128849630
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Entry
128849630 CDS
T08597
Symbol
GTF2H4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03022
Basal transcription factors
cuca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128849630 (GTF2H4)
09124 Replication and repair
03420 Nucleotide excision repair
128849630 (GTF2H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
128849630 (GTF2H4)
03400 DNA repair and recombination proteins [BR:
cuca03400
]
128849630 (GTF2H4)
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128849630 (GTF2H4)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128849630 (GTF2H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
128849630
NCBI-ProteinID:
XP_053908053
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All DBs
Position
31:608574..621545
Genome browser
AA seq
461 aa
AA seq
DB search
MEAAPPPRPQRPQLQCKNLHEFLRGLSPPLLDRLYGHPATCLAVFRELPGLAQAAVMRML
FLEQPVPQAAIALWVKKEHSKAQEESREVLLALRLWHPQTLPGGLPGVTLNPNFRQNLRI
ALLGGGKAWSDDTSQLGPDKHARDVPALDKYAEERWEVILHFMVGSPSAAVSQDLAQLLV
QAGLMKSEGGEAPCITSAGFQFLLLDTPAQLWYFILQYLRGAETRGMDLVEILSFLFQLS
FSTLGKDYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRFYPTRLAIALASGTSGTPPEP
DAHGFVVVETNYRIYAYTDSELQIALIALFSELLYRFPNLVVAQVTRDSVQAAIANGITA
DQIIHFLRTRAHPVMAKQIPALPPTITDQIRLWELERDRLRFSDGVLYNQFLSQVDFEVL
RDHARALGVLLFESPSRRLMVVTPGGHPEVKRFWKRQKHSA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgccccccccgcggccgcagcggccgcagctgcagtgtaagaacctccac
gagttcctgcggggactgtccccccccctcctcgaccgcctctacgggcaccccgcaacc
tgcctggccgtcttcagggagctgccgggcctggcgcaggcggccgtgatgcggatgctg
ttcctggagcagccggtgccgcaggctgccatcgccctctgggtcaagaaggagcacagc
aaggcacaggaggagagtcgggaggtgctgttggcgctgcggctgtggcacccccagacc
ctgccaggggggctccccggcgtcaccctgaaccccaacttccgacagaacctgcgcatc
gccctcctgggggggggcaaagcgtggtcggacgatacgagtcaattgggacccgacaaa
cacgcccgcgacgtccccgccttggataaatacgccgaggagcgctgggaggtgatttta
cacttcatggtggggtccccgagcgccgccgtcagccaagatctcgcgcagctcctggtg
caggcggggctgatgaagagcgaagggggggaggctccgtgtatcacctccgccgggttc
cagttcctcctcctcgacactccggcgcagctctggtatttcatcctccaatacctccga
ggggctgagactcgagggatggatttggtggagattctctctttcctctttcaactcagc
ttttctactttgggaaaggattactcggtggaggggatgagtgagtctctgctcacgttc
ctgcagcacctgcgcgagttcgggctcgtcttccagcgcaagcgcaagtcgcggcggttc
tacccgacgcgcttggccatcgctctcgcctcggggacatcggggaccccccccgagccg
gacgctcacggcttcgtcgtcgtcgaaaccaattaccgcatctacgcctacacagactcg
gagctgcagatcgcgctcatcgctctcttctcggagctgctctatcggttccccaatctg
gtggtggcgcaggtgacgcgcgacagcgttcaggcggccatcgccaacggcatcaccgcc
gaccagatcatccacttcctccgcacgcgggcgcaccccgtcatggccaagcagatcccg
gcgctgcccccgaccatcaccgaccaaatccgcctctgggagttggagagggaccgcctg
cgcttctccgacggggtgctgtacaaccagttcctgtcgcaggtggacttcgaggtgctg
cgggaccacgcgcgggcgctcggcgttctgctcttcgagagcccctcgcgccgcctgatg
gtggtcacgcccggaggtcaccccgaggtcaaacgcttctggaagaggcagaaacacagc
gcctga
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