Cuculus canorus (common cuckoo): 128849778
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Entry
128849778 CDS
T08597
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128849778 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
128849778 (CNOT3)
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128849778 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128849778 (CNOT3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
128849778
NCBI-ProteinID:
XP_053908336
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Position
33:1254745..1272708
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AA seq
722 aa
AA seq
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MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRFHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSQMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVGQSP
AKNGAKPPHAHAPSPAAPPPYPPTPAAGPPPTLGNGPSGGGGSGGGGAAPPTPAGGGAKG
SAPPSAHPPSTPTPYAQAVAPPAPPPSAPQPRPPSAQPAASKQNGATSYSSVVADSSSEP
GLSGGGSSQPLPSQPPPSSAPSPVAPPPLPVLGGGWRWGGGAPTLLVPLTSNPPASPTPT
FAEAKPGQPLLNGPPPFSAPPDIKAPEPLSSLKSMAERAAIGSGLEDPVPPLHLAERELL
LGGGGPPPAAGQPPGGLGEVSIPLSLGVCPLGPLPLAKEQLYQQALQEPAWHHMPHPSDS
ERIRQYLPRNPCPTPPYHHQVPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAKAL
KKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDRD
LQ
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagaggaaactgcaaggggagattgatcgctgcctcaagaaggtgtcggag
ggtgtggagcagttcgaggacatctggcagaagctccacaatgccgccaacgccaaccag
aaagagaaatacgaggctgacctgaagaaggaaatcaagaagctgcagcgcctgagggat
cagatcaagacctgggtggcttccaatgagatcaaagacaaacggcagctgattgataac
cgcaaactgatcgagacgcaaatggagcgttttaaggtggtggaacgagagacaaagacg
aaggcgtattccaaggagggactgggtttggcccagaaggtcgatccggcccagaaggag
aaggaggaggttggacagtggttaacgaacaccatcgatacgctgaacatgcaggtggat
cagtttgagagcgaagtggagtcgctctcggtgcaaacccgcaagaagaaaggggataaa
gataagcaggaccggatcgaggggctgaagcgtcacatcgagaagcaccggttccacgtg
cggatgctggagacgatcctgcggatgttggacaacgactccatcctggtggacgcgatc
cgcaagatcaaggacgacgtcgagtactacgtggactcctcgcaggaccccgactttgag
gagaatgagttcctgtacgacgacctcgacctcgaggacatcccgcaggcgctggtggcc
acgtccccccccagccacagccagatggaggacgagatcttcaaccagagcagcagcacc
ccaacttccaccacctccagctccccgatcccccccagccccgccaactgcaccacggag
aactcggaggatgacaagaagagggggcgctcgacagacagcgaagttgggcagtcgccg
gccaagaacggggcgaagcccccccacgcgcacgccccatccccggctgcgccccccccg
taccccccaactccagccgccggcccccccccaaccctgggcaacggccccagtggtggg
gggggctctgggggagggggtgcggcccccccaaccccggcagggggcggggctaagggc
agcgccccccccagcgctcacccccccagcacccccactccctacgcccaggccgtggcc
ccccccgcgccccctcccagcgccccccaaccgcggccccccagcgctcagccggccgcc
agcaagcagaacggggccaccagctacagctcggtggtggccgacagctcctcggagccg
gggctgagcggggggggctcctcgcagcccctccccagccaacccccccccagcagtgcc
ccgagcccagtggcccccccgcccctcccagttctggggggggggtggcggtgggggggg
ggcgcccccaccctgctggtgccgctcacctccaacccccccgcctcgcccacccccacc
ttcgccgaggccaaaccggggcagcccctcctcaacgggccccccccgttcagcgccccc
cctgacatcaaggcgccggagcccctcagcagcctcaaatccatggcggagcgagcggcc
atcggctccggcctggaggatccggtgccccccctgcacttggccgagagggagctgctg
ttggggggtgggggtcccccccccgcggcggggcagcccccgggggggctcggggaggtg
agcatccccctctcgttgggggtctgccccctcggccccctccccctggccaaggagcag
ctctaccagcaggcgctgcaggaacccgcctggcaccacatgccgcacccctccgactcg
gagcgcatccggcaatacctgccccgcaacccctgccccacgcccccctaccaccaccag
gtgccccccccgcactccgacaccgttgagttctatcagcgcctcagcaccgagactttg
ttcttcattttctactacttggagggcacgaaggcgcagtacctggcggcgaaggcgctg
aagaagcagtcgtggcgcttccatacgaagtacatgatgtggttccaacgccacgaggag
cccaagaccatcaccgacgagttcgagcagggcacctacatctatttcgactacgagaag
tgggggcagcgcaagaaggaagggttcaccttcgagtatcggtacttggaggaccgagac
ctgcagtga
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integrated database retrieval system
