Cuculus canorus (common cuckoo): 128849781
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Entry
128849781 CDS
T08597
Symbol
U2AF2
Name
(RefSeq) splicing factor U2AF 65 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128849781 (U2AF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cuca03041
]
128849781 (U2AF2)
Spliceosome [BR:
cuca03041
]
Complex A
U2 snRNP components
U2 related factors
128849781 (U2AF2)
Complex B
128849781 (U2AF2)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Transformer
Motif
Other DBs
NCBI-GeneID:
128849781
NCBI-ProteinID:
XP_053908339
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All DBs
Position
33:411489..425240
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AA seq
466 aa
AA seq
DB search
MSDFDEFERQLNENKQERDKENRHRKRSHSRSRSRDRKRRSRSRDRRNRDQRSVSRDRRR
RRSPLSLSGPLSRSPRHEKKKKIRKYWDVPPPGFEHITPMQYKAMQAAGQIPATALLPTM
TPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEEAMMDFFNAQMRLGGLTQAPGNP
VLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSENPSVY
VPGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATGLSKGYAFC
EYVDINVTDQAIAGLNGMQLGDKKLLVQRASVGAKNATLSTINQTPVTLQVPGLVSSQVQ
VGGHPTEVLCLMNMVLPEELLDDEEYEEIVEDVRDECGKYGLVKSIEIPRPVDGVEVPGC
GKIFVEFTSVFDCQKAMQGLTGRKFANRVVVTKYCDPDSYHRRDFW
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttcgatgagttcgagcggcagctcaacgagaataaacaagaacgcgataag
gagaaccgtcaccgcaagcgcagccacagccgctcccgcagccgcgaccgcaaacgccgc
agccgcagccgcgaccgccgcaaccgcgaccaacgcagcgtctcccgcgaccgccggcgg
cgccgatcgcctttgagcctttcggggccgctgagccgctccccccgccacgagaagaag
aagaagatccgcaagtactgggatgtgcccccccccggcttcgagcacatcacccccatg
cagtacaaggccatgcaagcggcggggcagatcccggcgacggcgctgctgcccacgatg
acgccggacgggttggccgtcacccccacgccggtgccggtggtcggcagccaaatgacc
cggcaggcgcggcgcctctacgtgggcaacatccccttcggcatcaccgaggaggcgatg
atggatttcttcaacgctcagatgcgcctggggggcctcactcaggctcccgggaacccc
gtcttggccgttcagatcaaccaggacaagaacttcgccttcttggagttccgctcggtg
gatgagaccacgcaggccatggccttcgacggcatcatcttccaagggcagtcgctcaag
atccgccgcccgcacgactaccaaccgctgcccggaatgtccgagaacccctccgtctac
gtcccgggtgtcgtctccacggtggtgcccgactccgcgcacaaactcttcattgggggt
ctccctaattaccttaacgacgatcaggtgaaggagcttctgacgtcgtttggacccctc
aaagcctttaatctggtgaaggacagcgccaccggactctccaagggttacgccttctgc
gagtacgtggacatcaacgtcaccgatcaggcgatcgcaggactgaacgggatgcagtta
ggggacaaaaagctgctggtgcagagggcgagcgtgggggccaagaacgccaccctgagc
accatcaaccagaccccggtgacgctgcaggtgccggggctggtgagctcgcaggtgcag
gtgggcgggcaccccaccgaggtgctgtgcctgatgaacatggtgctgcccgaggagctc
ctcgacgacgaggagtacgaggagatcgtcgaggacgtccgcgacgagtgcggcaaatac
ggcctcgtcaaatccatcgagatcccgcggcccgtcgacggcgtggaagtgcccggctgc
ggcaagatcttcgtggagttcacctcggtcttcgactgccagaaggcgatgcaggggctg
acggggcgcaagttcgccaaccgcgtggtggtcaccaaatactgcgaccccgactcctac
catcgccgcgatttctggtag
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