Cuculus canorus (common cuckoo): 128850302
Help
Entry
128850302 CDS
T08597
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04137
Mitophagy - animal
cuca04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128850302
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128850302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cuca03019
]
128850302
03009 Ribosome biogenesis [BR:
cuca03009
]
128850302
04131 Membrane trafficking [BR:
cuca04131
]
128850302
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cuca04147
]
128850302
Messenger RNA biogenesis [BR:
cuca03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
128850302
Ribosome biogenesis [BR:
cuca03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
128850302
Membrane trafficking [BR:
cuca04131
]
SNARE
SNARE associated proteins
Others
128850302
Autophagy
Aggrephagy
Other aggrephagy associated proteins
128850302
Exosome [BR:
cuca04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128850302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
TsaE
NB-ARC
ResIII
Viral_helicase1
NACHT
Sigma54_activat
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
128850302
NCBI-ProteinID:
XP_053909314
LinkDB
All DBs
Position
W:8871752..8911392
Genome browser
AA seq
806 aa
AA seq
DB search
MASGSDSKADDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQAKMDELQLFRGDTVLLK
GKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVEVPQVTWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNIGDGGGAADRV
INQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRVAILKAN
LRKSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRESIESEIRRERERQTNPSAM
EVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPSGNQGG
AGPSQGTGGGSGGNVYSEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaggatccgattctaaagcagatgacttatcaactgctattctgaagcagaag
aacaggcccaatcgtttaattgttgatgaagccatcaacgaagacaatagtgttgtgtca
ctgtcccaggcaaaaatggatgaattgcagctgttcagaggagacactgttctactaaaa
ggaaagaagaggagagaagcagtctgcattgttctgtcagatgatacctgctcagatgag
aagattcgcatgaatagggttgttcgcaacaacctgagagtccgcctgggtgacgtcatc
agcatccaaccttgcccagatgtgaaatatggcaaacgtatccatgtgctaccaattgat
gacacggtagaagggatcacagggaatctgtttgaggtctatctcaagccgtacttcctg
gaagcatacagacctatcaggaaaggtgacatcttcttggtgcgtggagggatgcgtgca
gtggagttcaaagtggtggagacagatccaagtccttactgcatagtggctccagacaca
gtgatccattgtgaaggagagcccatcaaacgagaggatgaagaagagtcactgaatgaa
gtgggctatgatgacattggtggctgccggaagcagctggctcaaatcaaagagatggtg
gaacttcccctccgacaccctgcacttttcaaggccataggggtgaagcctcctcgtggg
atcctgctgtatggtcctcctggcactggtaaaacattaattgcccgagcagtggcaaat
gaaacaggagctttcttcttcctgatcaatggtcctgagatcatgagcaagctggctggt
gagtctgagagcaacctaaggaaagcctttgaagaagcagagaagaatgctcctgccatc
atcttcattgatgaactggatgccattgctcctaagagagagaagacacatggagaggta
gaacgtcgcatagtgtctcagctgttgactcttatggatggactgaaacagagagcacat
gtgatcgttatggcagctaccaacagacctaacagcattgacccagcgctcaggcgattt
ggtcgttttgacagagaggtagatattggtatcccagatgccactggacgcctggagatc
ctgcagatccacacaaaaaatatgaaactggctgatgatgtggatcttgaacaggtggca
aatgagacccatggccatgttggtgctgacttggctgctctttgctcagaagctgctctt
caggctatcagaaagaagatggatctcatagacctagaagatgaaaccattgatgctgaa
gtgatgaactcactggctgtgaccatggatgacttcaggtgggctctgagccagagcaac
ccttctgctcttcgggagactgtggtggaggtgccacaagttacctgggaagatattggt
ggtctagaagatgtaaagagagaactccaggaacttgtacaatatcctgtggagcaccca
gacaagttcctcaaatttggcatgaccccatcaaaaggggttctgttctatgggccacct
ggttgtggtaagacactgctggccaaagccattgccaatgaatgccaggcaaacttcatt
tccatcaaggggccagaattgctcaccatgtggtttggcgagtctgaagctaatgtgcgt
gagatcttcgacaaggcccgccaagcagctccttgtgtgctcttctttgatgagctggac
tccattgcaaaggcccgaggtgggaatatcggcgatggtggtggtgctgcagaccgtgtc
atcaaccagatcctgacagagatggacggcatgtccaccaagaaaaacgtcttcatcatc
ggtgccactaacaggccagacatcattgacccagccatcttgcgccctggccgcctggat
cagctcatctacatcccactgcctgacgagaagtcccgggttgctattcttaaggccaac
ctgaggaaatcaccagttgccaaggatgttgacctggatttcctagcgaagatgacaaat
ggcttttcgggggctgacctgacagaaatttgccagcgtgcctgcaaactggccatccgt
gagtccattgagagtgagatcaggcgagaacgcgagaggcagaccaacccttctgccatg
gaagtggaggaggatgacccagttcccgagatacgcagggatcacttcgaagaggccatg
cgctttgctcgacgctctgtcagtgacaatgacatcaggaaatacgagatgtttgcacag
actctacagcagagccgtggctttggcagcttcaggttcccgtcgggtaaccagggtggt
gctggtccgagccaaggcacaggaggtggcagcgggggcaacgtgtacagtgaagacaat
gatgatgatctctacggttaa
DBGET
integrated database retrieval system
