Cuculus canorus (common cuckoo): 128850977
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Entry
128850977 CDS
T08597
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cuca03000
]
128850977 (SOX21)
Transcription factors [BR:
cuca03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
128850977 (SOX21)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
128850977
NCBI-ProteinID:
XP_053912738
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Position
1:53031707..53032774
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AA seq
281 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVAEHEHPHGLKAGGLHGG
AAAGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggatcacgtcaagagaccgatgaacgctttcatggtgtggtcgcgg
gcgcagcggcggaagatggcccaggagaaccccaagatgcacaactcggagatcagcaag
cgcctgggcgccgagtggaagctgctgaccgagtcggagaagcggcccttcatcgacgaa
gccaagcggctgcgggccatgcacatgaaggagcatcctgactacaagtaccggccccgg
cggaagcccaagacgctgctcaagaaggacaagttcgctttcccggtgccctacgggctg
ggcggcgtggcggagcacgagcacccgcacgggctgaaggcgggcgggttgcacggcggg
gcggccgcggggctggtgcccgagtcgctgctcgccaaccccgagaaagcggccgccgca
gccgctgccgccgccgcccgcgtcttcttccctcaatcggccgccgccgctgccgccgcc
gccgccgcagccgccgcgggcagcccctactccctgctggacctaggctccaaaatggcc
gagatttcctcttcctcctcttcctcgggctcggggctgccctacgcctcctcgctgggc
tacccgggcgccggcggggcgggcgctttccacggggccgctgccgccgccgctgccgcc
gccgccgccgccggggggcacacgcactcgcacccttcgcccgggaacccgggctacatg
atcccctgtaactgcagcgcctggcccggcccggggctgcagccgccactcgcctacatc
ctcctgccgggcatgggcaagccccagctggacccttaccccgcagcctacgccgcggcg
ctatga
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