Cuculus canorus (common cuckoo): 128851864
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Entry
128851864 CDS
T08597
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04517
IgSF CAM signaling
cuca04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128851864
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128851864
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cuca04812
]
128851864
Cytoskeleton proteins [BR:
cuca04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
128851864
Intermediate filaments
Intermediate filament-binding proteins
128851864
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
CAMSAP_CH
SCAR_helical
Motif
Other DBs
NCBI-GeneID:
128851864
NCBI-ProteinID:
XP_053919926
LinkDB
All DBs
Position
3
Genome browser
AA seq
1871 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLMSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPIIDSLHEQAKALPQEHAGSPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPSEKEIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNY
HLECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAE
KLESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLTEAEKLLTQHENIKNEIDNYEEDYQKMRDMGEMVTQGQTDAQYMFL
RQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKN
REAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWEELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQISRRDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEIMY
SSSLAFSLWVGERMAIATXTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNI
ITESSPNAEAIQQRLADLQQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQE
LYMMSEEKAKDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMR
QSKVDKLYAGLKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEH
VTMLQERFREFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLE
LIDTRTQILAASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHD
IQALGTQVRSE
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgacagtagcgacagattatgacaatattgaaatccaacagcagtacagtgat
gtcaacaaccgctgggatgtcgatgactgggacaatgaaaatagttctgctcgactgttt
gaacgatcccgcatcaaggccctagctgatgaacgtgaggcagttcagaagaagactttc
acaaagtgggtcaattcccacctggcacgtgtgtcatgcagaatcacagatttgtacact
gaccttcgcgatggaaggatgctcatcaaacttctggaagttctttcaggagagagactt
cctaaaccaaccaagggaaggatgcgcatccattgcctggagaatgttgataaagcgctt
cagttcctgaaagagcaaagagtgcacctagaaaacatgggatctcatgatattgtggat
gggaatcacaggctgacgcttggccttatttggactattatcctgagattccagatccaa
gatatcagtgttgaaactgaggacaacaaggagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaagacagctggttaccccaatgtcaacattcacaactttactaca
agctggagggacgggatggctttcaatgccctaatacataagcacaggcctgatctgatt
gattttgacaagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcaacaccttggtctaactaagctcctggaccctgaggatatcagtgttgatcat
cctgatgaaaagtccatcatcacctatgtggtgacgtattaccactacttctccaagatg
aaagctttagctgttgaaggaaaacgtatcggaaaggtgcttgacaatgccattgaaacg
gagaaaatgattgaaaaatatgaatcgctggcttctgacctgcttgagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactctctagttggtgtgcaacagcag
ctacaggcattcaacacttaccgcacagtagagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccatccaaagcaaaatgagagccaacaatcagaaagta
tacatgccaagggagggcaaactcatctctgatattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacgcagatttgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcagcgtctcgtttctcaggataattttggctttgaccttccagcagtagaggctgca
acaaaaaaacacgaggccattgaaacagacattgcagcctatgaagaacgagtccaggct
gtggttgcagttgcaaaggagcttgagactgagaattaccatgatatcaaacgcattact
gcgagaaaagacaacgttatccgcctatgggagtatctcctggagctgcttagggcacgg
agacagcggctggagatgaatcttggtctgcaaaagattttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgcttttgctttctcaagactacggcaaacatttg
ttaggagttgaagacctattgcagaaacatgctcttgtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcatctgctcagaagtttgccactgatggagaaggt
tacaaaccatgtgacccacaggttatcagggaccgtgttgctcacatggagttctgttac
caagagttgtgccagcttgcagctgagcgccgggcccgcttggaggagtcccggcgcctc
tggaagttcttctgggaaatggctgaagaagagggttggatcagggagaaggaacagatc
ctgtcatctgatgactatgggaaggacttaaccagtgttgtacgtctcatgagtaaacat
aaggcatttgaagatgaaatgagtggtcgtagtggccactttcagcaggcgataaaagaa
ggtgaagacatgattgcggaggagcattttgggtctgagaaaatcagagaaagaattaag
gatattagggagcagtgggctaacttggaacagttatctgccattaggaagaagcgtctg
gaggaagcctctctccttcaccagttccaggctgatgctgatgatattgatgcatggatg
ttggacatcctcaaaattgtctccagcaatgatgttggccatgatgaatattccactcag
tctttggtcaagaaacacaaagatgtggctgaagagattgcaagctaccggccaatcatt
gactcgcttcatgaacaagcaaaggctctaccgcaggaacatgctggatctccagatgtg
caaggcaggttgtccggaatagaggaaagatacaaagaggttgctgagctgactcggctg
cgtaaacaggccttgcaggatacccttgctctttataaaatgttcagtgaggcagatgct
tgtgagctttggattgacgaaaaggagaagtggctgaataatatgcagattccagagaaa
ctggaggacctggaagtgatccagcacagatttgaaagcttagaaccagaaatgaacaat
caggcatcacgtgttgcggtagtgaaccaaattgctagacagctaatgcacagtggccat
ccaagtgagaaggagatcaaagcgcagcaagataaactcaacacaagatggagccagttc
agagaactggtagataggaagaaggatgctctgctctctgctctgagtatccagaactac
catcttgaatgtaacgaaaccaaatcctggattagagaaaagaccaaagtgatcgaatcc
acacaagatctgggtaatgatctggctggagtgatggccctgcagaggaagctgacaggc
atggagcgtgacctggtagccattgaagccaagctaagtgacctgcaaaaagaggcagaa
aagttggaatctgagcatcctgaccaggcacaggctatcctttcacggctcgcagaaatc
aatgatgtatgggaagaaatgaagaccaccctcaagaaccgggaagagtcccttggagag
gcaagcaaactgcagcagttcctgagagatctggatgacttccagtcttggctatccaga
acgcagactgcaattgcatcggaagatatgccaaacacactgacagaggctgagaagctg
ctcactcaacatgagaatattaagaatgaaatcgacaattatgaggaagattatcagaaa
atgagggacatgggtgagatggtgacacagggacagactgacgctcagtacatgttctta
cgccagcgcctacaagctttggacactggatggaatgagctccacaaaatgtgggagaac
aggcaaaatctcctttcccagtctcatgcctaccagttgtttctcagagataccaagcaa
gcagaagcatttcttaataaccaggagtatgttttggcacacacagaaatgcccactacc
ttggaaggagcagaagctgctattaaaaaacaggaggatttcatgaccacgatggatgcc
aatgaagaaaagatcaatgcagtcgtagagactggcaggaggctagttagtgatgggaat
attaactctgataaaatccaggagaaagtggactctattgatgacagacataggaagaac
cgtgaagcggccagtgaacttctgatgagactgaaagataacagagatcttcaaaagttt
cttcaggattgtcaagagctctcactctggatcaatgagaagatgcttacagcccaggat
atgtcctatgatgaggcaaggaacctgcatagcaaatggctgaaacatcaggcatttatg
gcagaacttgcatccaacaaagaatggctggagaagattgaaaaggagggaatgcagctc
attgcagagaaaccagagactgaagctgtagtgaaagaaaagctgacaggtctccatcaa
atgtgggaagagcttgaatccactacccagaccaaggctcagcgtctctttgatgcgaac
aaggcggagctttttacccagagctgtgctgatttggataagtggctgaatggtttggag
agccaaattagtcggagggactacggaaaagatctcaccagtgtaaacatcttgttgaag
aagcagcagatgctggagaatcaaatggatgttcgtaagaaggagatagaggaactgcaa
agccaggcacgggctttaagccaagaagggaagagtacggatgaagtagatggcaagcgc
cttactgtagagaagaaatttttggagttgttggaacctttgaatgaaagaaaggcaaac
ctgctggcttccaaagaaatccaccagttcaaccgggatgtggaagatgaaattatgtac
tcttcttctcttgctttcagtttgtgggtcggagagaggatggctatagctacgnttact
gatcatggacacaatctacagactgtgcagctactaataaagaaaaatcagacccttcag
aaggaaatccagggacatcagcctcgtattgatgacatttttgagaggagtcaaaacatt
attactgagagtagccccaatgctgaagcaattcagcagagacttgcagacctgcagcaa
ctgtggaacctcctaatcgaggagacagagaaacgccacaagcgccttgaggagtctcac
agagcacagcagtactactttgatgctgctgaggctgaggcctggatgagcgagcaggag
ctctacatgatgtcagaagagaaagccaaagatgaacagagtgcagtgtccatgctgaag
aaacaccagattttggaacaagctgtcgaagactatgctgaaactgtgcaccagctttca
aagaccagcagaactttggtggcagataaccacccagaaagtgagcgtatcagtatgcgc
cagtccaaagtggataagctgtatgcaggcctgaaggatctagctgaagagagacggggc
aagctggatgagagacacaggctgttccaacttaaccgtgaggtggatgacctggagcaa
tggattgctgaaagggaggtggtggcaggatcccacgagctgggacaggactacgaacat
gtaacaatgctacaggagcgattccgagaattcgcccgagacactgggaacattggacag
gagcgtgttgatactgttaaccacatggcagacgagcttatcaactctggacattcagat
gctgcaacaattgcagagtggaaggatggactcaatgaggcctgggctgatctactggag
ctcattgacacgagaacacaaattctagcagcctcttatgaactgcacaaattttaccat
gatgccaaggagatcttgggacgtattcaagacaagcataagaaactgcctgaagagctt
ggtagagaccaaaacacagtggaaacactacagagaatgcacacaacatttgagcatgat
atccaggctctcggcacacaggtgcgtagcgagtga
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integrated database retrieval system
