Cuculus canorus (common cuckoo): 128852251
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Entry
128852251 CDS
T08597
Symbol
CFAP54
Name
(RefSeq) LOW QUALITY PROTEIN: cilia- and flagella-associated protein 54
KO
K25553
cilia- and flagella-associated protein 54
Organism
cuca
Cuculus canorus (common cuckoo)
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cuca03037
]
128852251 (CFAP54)
Cilium and associated proteins [BR:
cuca03037
]
Motile cilia and associated proteins
Sperm associated proteins
128852251 (CFAP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Tube
Motif
Other DBs
NCBI-GeneID:
128852251
NCBI-ProteinID:
XP_053923407
LinkDB
All DBs
Position
1:169653911..169762777
Genome browser
AA seq
3242 aa
AA seq
DB search
MTLPPSLVPLVRSQKGTLAHSPVTDTAKAQTPAREREAAGRAQRRWVLAPARPPPEHVAG
RRRRVPGRRMAHPADPPPASFFGAVAPGNPVVDSFEAELRAALGWLRRPGGAEEAPPQQH
RLHRRGANTLFNIWIKYKPRLPEWYYNEKLLKVGDSLVQIKEYKLALLQCYGRYLQQFVS
GNLDEIIDDVHQFKSTFFPNGFRDKNAMLTFHALQQRNVCTYHMVCSSDRNLQNQESLQT
CFNVLSLLRITMQVALPREDLCWLIYNGTIHIYAICRHLMMRGQSTKVLEYLLWASICME
SSIPLLSVHYLTWRATLYTAVSQCYFDCQAGIHGEVFARRGLIKIDELKQLENISCSLEN
SETKKIFREATIKMSVMIFKRAVYESRRKSKSCVQPKLRVSWKEAQNLPGSHSITKRLLT
EMFDSAAAQFLAILEALSDSSKHVLRRVSPVPDETEIHDVISELFFAGLEILSGGVSSTD
IQGSHCTSHFGIINASSTLLQLILTGEEGVSGDAAVKFIKLAFSYEKWDVFDSAIELVVN
FLQAQDDPTWKKAEMELKLLTVVQPLLFPKKLKPVFSLSENNTKEARVPHDSEKKQTFEM
SVESSLKHGEPSQDLIILATTLFSYISTSKQNHQPDKEMLADVVMILWQKCKPGLQQIQM
NGSDYLEYISESKAYQWFYVLWIINEVIQKSSIADTDVVMLAETTLHLTAILENVAESTS
KPKEKAGKRRASLSQDETCDIPEILMKSPAEQLQSAYESLEKAINGMNTFRFNGRESIFD
NCCTKVDSSDQNLSSLLGCGNDKTGTGNSFVMDLHLELIQAQHRVAVKLLKMTEGTQKDD
RSHKSSKFYVKNNKESHYLTEAAIMRKIKKNKLSRAIFLMQKVAQRFPKELTTSSQRQLL
EEALTLVEQVEAEQSALYHSLKEAMSSKKKRKTPPPPLLLSRSHCSMTFKPAPFTSDVQV
SWYSIFGSVAEGSNMKVRLNHNKLLNTGEEIPADGTSLFEIQGLEPNEKYIFAVAAYSSD
GKLIGDAIGEMTKPILAYPPLSATTVRAYLTQVAYQTGNYKLARESFSPMWDYFVANSFP
LPAKAAVISARNDLTISENRLCFEAVSQTSPITLHLFLRNLFAICDINVMEGGLFCDSIS
SNEMLYKEQVSRLAECERMTVAIELSNWLNDANYTLQSVVQCYGLLAPIIYHKISSVPVA
QILIKCLAVLQEIPSATLQRRETGCYESIQHMIACASFYTAKVLRLWKEYELAVIVVNYG
KKLLDSSPTTSPCLSEAMKTEETNTKKKVKTTSAKTSHLAAVEKAKENLSALELNLLRLT
EPACGSELTGQEDSLFLYPVISCWTSDSAYQEVMKFKETPRFLEFFVKLLHKILNEEMFQ
CVLEWAGDVEIYLKRRNDHIVYGISTQETGSSTLPESIDKRNTGDTEFQKISSLKKPKAS
TSKKPGKEASSLNRKGQSLRQYLMKHPNIMTSPEAERXMKIKLQKVARQTLVVLLKPIVS
NYLNQKMFHQTCLEEMPWRSQMNIYLAISHYNLFRKELEEQYNIGICGSQHLDSYNILDP
EIFSLNNSGTVVVREAAGNNMRTPTPSGIKKSGMTENQTCTDRYSEDSIELRGTDTPRTR
ETNNTEIPISHSPNECNQLLSNTVLLEHFTKIFLHIRRAVVLAHRGGHWTLLQNACRELW
NFTEELQLIADHSHSHVDAFPITRDFLRNTIWLPFYLASDMIIDMITELQASRSLKIVDP
EGDFCIPSCLGGINDENGGSNLHPQSPLDDVNIVDLKWICNLILKTIELLYQMKKWEALV
HIAVQFNVFTHERYTEQVSPLLVYAQRQLLERIQQFTGPESHQSHFLKYLSDTARKMSCR
SYIGQKLQLPVAHSSSELIFPGFCPEMKNDYTDCSQEKALAYVPLDVNDTLKCFRDTLQK
SKYHSRALRHSRKLLSLFLAHTQENAGGVIGNRISSNRRLEFNVGADLIFLPTPQDLSQE
EFNFSNMVESKPIPQSQLSIIISSYEKTIGVLEMNSQRDLKVQALHELGNLHFYAGNKRA
AFKYWCQALDETLNIADTLNNWQELGFPKDATDCFVAGRSTDISQKFLSQAGVWGCLHAA
VLVAKIAQYITTSKMRLRTKYCCFSAILFKSLFRASLPHPTSDYDFAQYETDMLIPGIDL
FSDRYRANICTVVASLNFLMFELHCAKQNLIILPLFTLYQYFVSEICKDPVKCIEGRILK
IKVLTDIGFFTEAFHELSLLNCGERIPWKIPAGYRKIEPMKALQKFDSSESLLSLTNLQV
LEDTFNWSLPLTMVPLCSKRIINKLTLAKMHLIICLSATINNMPEKVEKHVYSVDNKNVK
EPSGITASNVKVDAVKNSRQQEQRGTIVRLIHCKDELNMAMLKGILLMEAEESLSHLVQN
IQDKYDGDISQCFAEDLESLIEARLQLAAISQQRHHAALSVALAFSTIRLLQDAKIFRME
VTHFQEEKDEWECLDCNVEDVRLTHSVIAREHMNVRLWLRCRTMLVTALIRQIYGAGDME
ENIVAERRSVIKEAILEAEAFGDIETQAEMMVQAALLDLQEKCPVTGIKLLLENIISLLQ
EDTFISPPASLTLVKSMLLLADILAVETAEDSEHWSSTVEPLNLLILAHELTIKAFFVYG
QPIERQIEDNTLTCLVLPTKNIYLPHINTLAQVKMRIGCILAEKVACTPARRDPLQWLCA
LKHLESALKLCRAAATKQLDMEAELLFQIGKVERQITEAGNNKSFQAVETLSEAIKLSQQ
HDQKFELIRRSYLEIALLYLHFATNDEGVSAKDKMVPSKSNMSPGELSSTEEALKSEDYK
VRAWIAVRAATQVSEAAIASQLLIGMQSVKEHSMKDEMRQKIPEFASMDLLASYRDFLSD
GYNVVFDNPKASSTKKTQMVDDKQSQSEGTESLATTASQKKETITWIHLIHYHSFLRRLY
NMNILVAAPDSGPGSFSARDGRLSSVFDTGIVLHIAEMHSFLKKYLPGYSMCSVENFPEE
LRDVELPLNRAADSSKMSVEVTGIASKMSRVRTASLVSLITEADSQMESRAANASNKEIN
IQWYIPSLAKPSDDTETKVLLLYAYNTKPVKINNIKTFSSMSMFSGYLWIPLARIISLQK
KLSNLKQQVENLMQNSESLSAASEPTSFLEQGESLKKNPSEKPKMNVAKVHLDEKTEEMA
KRCLSEVKALLSAVPALSLPLTEIPFEITLQSIASLGDMFDPASGCIITEESLFNWIISL
FH
NT seq
9729 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcctcccagcttggtgccattagtgaggtcgcagaaggggacactcgcccac
tccccggtcactgacacagccaaggcacagaccccggcccgagagcgggaggcagctggg
cgggctcagcgccgctgggtcctagcgcccgcccgtccgccgcccgagcacgttgccggg
cgacgccgccgcgttcccggccgccgcatggcgcatcccgccgatcccccgccggcctcg
ttcttcggggccgtggcgcccggtaaccccgtggtggacagcttcgaggccgagctgcgt
gccgcgttgggctggttgcggcggccgggaggcgcggaggaggccccgccgcagcagcac
cgcctgcaccgccgcggagcaaatactttgttcaatatatggatcaaatataagcctcga
ctgccagagtggtattacaatgaaaaacttctgaaagttggtgattcccttgttcagatc
aaagaatataagttggcacttctacagtgctatgggagataccttcagcagttcgtttct
ggaaaccttgatgagatcatagatgatgtccatcaatttaaatccaccttttttcctaat
ggtttcagagacaaaaatgcaatgcttacgttccatgctttgcaacagaggaatgtttgc
acttatcacatggtttgcagcagtgacagaaatctccagaatcaagagtctctgcagact
tgtttcaatgtcttgtccttattacgaatcactatgcaagtggctctgcctcgggaggat
ttgtgttggcttatctataatggtactattcatatttatgccatatgcagacatctgatg
atgcgaggtcagtctactaaggtcctggaatacttactgtgggccagtatttgcatggaa
tcatccattccgctcttatctgtacattacttgacgtggagagctaccctatatactgca
gtttctcagtgttattttgattgtcaagccggcattcacggagaggtatttgctcgtcgt
ggtctgattaaaattgatgaactgaagcagttagaaaatatcagttgttcgctggaaaat
tcagagacaaagaagatttttagagaggccaccataaagatgtcagtaatgattttcaag
agagcagtatatgaatccagaagaaagtcaaaaagctgtgttcaacctaagttaagagtt
agctggaaagaagcccaaaatttgccggggtctcactctattaccaaacggctgctgaca
gaaatgttcgacagtgctgcagctcagttccttgccatcctggaggctctgtctgatagc
agcaagcatgtgttgcgccgtgtttcacctgttcctgacgaaactgaaattcatgatgtt
atttcagagcttttttttgcaggcctggaaatcctctcaggtggagtgagcagtaccgat
attcaaggaagtcattgcaccagtcattttggtataattaatgcgtcatcaacccttctg
cagttgatactaacaggagaagagggtgtgtctggagatgcggctgtgaaattcataaaa
ttagctttcagctatgaaaagtgggacgtatttgattctgctattgaacttgttgttaat
tttcttcaggctcaagatgacccaacatggaagaaagctgagatggaactcaaacttctt
acagtagtgcaacctctactgtttccaaaaaaacttaaacctgttttttctcttagtgaa
aataataccaaagaagctagggtgcctcatgattctgaaaagaaacaaacattcgaaatg
agtgtggagagttccctaaaacatggagaaccttctcaggatcttatcattttggcaaca
acattgttttcctatatctccacatctaagcagaatcatcaacctgacaaagaaatgctt
gctgatgttgtaatgattttgtggcagaaatgtaaaccaggacttcagcaaatccaaatg
aatggaagtgactacttagaatatatcagtgaatccaaagcttaccaatggttttatgta
ctttggataataaatgaagtaattcagaagagcagcatagcagacactgatgttgtaatg
cttgcagagacaactttacatctaactgcaatattggaaaatgtagctgaatctacaagt
aaacctaaggaaaaagcaggaaagagacgtgcttctctctcacaagatgaaacctgtgac
attcctgaaatactgatgaagagtcctgcagaacaattacaatctgcttatgagagtctt
gaaaaagcaatcaatggaatgaacacatttcgctttaatggtagagagtcgatatttgat
aactgctgtacaaaggtggactcaagtgatcagaatttgagctctcttttgggatgtggt
aatgataagacaggaacaggtaatagttttgtaatggatttacacttggaactcattcag
gcccaacatcgagtagctgtgaaacttcttaaaatgacagaaggtactcaaaaggatgac
agaagtcataagtctagcaagttctatgtgaagaataataaagaatcccattatttaaca
gaggcagctataatgagaaaaataaaaaagaataaactatccagagcaatttttttgatg
caaaaggttgcacagaggttccctaaagagttaactacttcttcccaaaggcagctactg
gaggaagcactaactttagttgagcaagttgaagctgaacaaagtgcattgtatcacagt
ctcaaagaagctatgagcagcaagaaaaaacgcaagactcctcctcctcctctattactt
tctagatcacattgctccatgacatttaaaccagccccattcacttcagatgttcaggtt
tcatggtacagtatttttggctctgtagcagaaggaagtaatatgaaagtaaggttaaat
cacaataaacttctaaatacaggagaagagataccggctgatgggacaagcctcttcgaa
atacaaggcttagaacccaatgagaaatacatatttgcagtcgcagcatattcttctgat
ggaaaacttattggtgatgccattggggaaatgactaagccaatccttgcttatccacct
ctttctgctactactgttcgagcctatctaactcaggtagcatatcagactggtaactat
aaattagccagagaatctttttcaccaatgtgggattattttgttgcaaattcttttcca
ctacctgccaaagcagctgttatttctgcaagaaatgatttgactatatctgaaaacagg
ttatgttttgaagctgtatctcagacttctcctattaccttgcacctctttctgagaaat
ttatttgctatttgtgatattaatgtcatggaaggaggactcttctgcgattccatctct
tccaatgagatgctttataaggaacaagtttctagattagcagaatgtgaaagaatgact
gtggccattgaacttagcaattggttgaatgatgcaaattataccctgcagtctgttgta
caatgttatggtctccttgctccaattatttatcacaagatttcttcagtgccagtagct
cagatcctcattaagtgcttggctgtccttcaagaaattccaagtgctactttgcagagg
agggagacaggatgttatgagagtattcagcatatgatagcttgtgcttcattttataca
gcaaaggtattacgtttgtggaaagaatatgaactagcagtaattgttgttaactacggg
aaaaaattgttggattcctcaccaaccacctcaccctgcctgtcagaagctatgaaaaca
gaagaaacaaacactaaaaagaaagttaaaaccacttctgcaaagacatcccatttagct
gcagtggaaaaagcaaaagaaaatttaagtgctcttgaattaaatctcctcagactgaca
gaaccagcttgtggatcagagcttacaggacaagaagattctttattcctctaccctgta
atttcatgttggacatcagacagtgcttaccaagaagtgatgaaattcaaagagacacca
cgttttcttgagttctttgttaaacttttgcacaaaatcctgaatgaagagatgtttcaa
tgtgttctggaatgggcaggtgatgtggaaatttacttgaaaaggaggaatgatcacatt
gtgtatggaatttcaacacaagaaacaggttcttccactttgccagaaagcatagataaa
agaaatacaggagatacggagtttcagaaaatctcttctttaaagaaaccaaaggcatca
acttcgaagaaaccaggaaaagaagcttcaagtcttaatcgaaaaggacagagtcttaga
cagtatttaatgaaacatccaaacataatgacatctccagaagcagaaaggtaaatgaaa
ataaagttgcaaaaagtagctcgtcagaccttagtggtgctgctgaaaccaattgtcagt
aattacttaaaccaaaagatgtttcatcaaacatgtcttgaagagatgccctggaggtct
cagatgaatatctatctggcaatttcacactacaacttatttagaaaggaactggaagag
caatataacattggaatttgtggttcacagcatctggacagttacaatattttggatcct
gaaatattctcattaaataattctggcactgtagtggtgagagaagctgcagggaataac
atgagaacaccaactccttctggcattaaaaagtcaggaatgaccgaaaaccaaacttgt
acagatagatattctgaggacagcattgaactgagaggaacagatactcctcgaactcga
gagacaaacaatacagaaatacccatctctcattcccccaatgaatgcaaccaattgctg
tcaaatacagttttattggagcattttacaaaaatctttttgcatataagaagagcagtg
gttcttgctcaccgtggtggccactggacgttgcttcaaaatgcttgtcgagagctttgg
aactttactgaagaattacaattgattgctgaccattcacattcacatgtggatgcattt
cccattaccagggattttcttaggaacaccatctggttgccattttatttggcatcagac
atgatcattgatatgataactgagctacaagcaagcagatctcttaagattgtggatcct
gaaggagacttctgcattcccagttgtttaggaggtattaatgatgagaatggtggctct
aatctccatccacagtctcccctggatgatgtaaatatcgttgacttgaagtggatatgt
aatctgattcttaaaacaatagaattgttatatcaaatgaagaagtgggaagcactggta
cacatagctgtacaatttaatgtctttacacatgagagatacacggaacaagtgagtcca
ctgctggtgtatgctcagaggcagctgctggaaaggatacagcaattcactggcccagag
agccatcaatctcatttcctaaaatatctgtctgatactgcacgtaagatgagttgcaga
agctacatagggcagaaattacagcttcctgtggcccattcttctagtgaattgattttt
cctggattctgtcctgagatgaaaaatgattatacagactgcagtcaagagaaagcccta
gcttacgtacctcttgatgtgaatgacacactgaaatgttttagagatactctacagaaa
tctaaataccacagcagagcattgagacacagcagaaaactactttcattatttcttgca
cacacacaagaaaacgctggaggagtaattggcaatcgtatctcttcaaatagaagactg
gaatttaatgtgggagctgatctgatatttctaccaacgccacaagacctttctcaagaa
gaatttaatttctccaatatggttgagagcaaaccaataccacagtcacagctttccata
attatctcttcctatgaaaaaacaattggagtccttgaaatgaacagccagagagacctc
aaggttcaggctctgcatgaacttggaaatcttcacttttatgctggaaacaaaagagct
gcttttaaatattggtgtcaagcccttgatgaaacactcaacattgctgatactcttaac
aactggcaagaattaggttttccaaaagatgctacggactgctttgtagctggaagatcg
actgatattagtcagaaatttctttctcaggctggagtttggggttgtttacatgcagca
gtcctagtggctaagatagctcagtatataacaacatcaaagatgagattaagaactaaa
tactgctgtttttctgctatactttttaagagcctgttcagagcttctcttccacatcca
acatctgactacgactttgcccaatatgaaacagatatgcttattcctggtatcgacttg
ttctctgatcgctacagagctaatatctgtactgtagttgcaagtctgaatttccttatg
tttgaactacattgtgcaaagcaaaatttaataattttaccactgttcaccttataccaa
tactttgtttctgagatttgtaaggacccagtcaaatgtattgaaggaagaatcttaaag
attaaagtgcttacagatataggcttttttacagaggcctttcatgaactgtctttgctt
aactgtggagagagaattccgtggaaaatacctgcaggatacagaaaaattgagccaatg
aaggccttacagaaatttgactcctcagaatctctcctgagtcttacaaatttacaggta
ctggaagatacatttaattggagtctgcctttaacaatggtgccactgtgcagtaaacga
attataaataaattaaccttagccaaaatgcatttaatcatttgcctttctgccacaata
aataatatgcctgaaaaagtggaaaaacacgtctattctgttgataacaaaaacgtgaag
gagccaagtggaattacagcatcaaatgtaaaagttgatgctgttaagaattcaagacaa
caggaacaaagaggcacaatagtgcggctcattcactgtaaagatgaattaaatatggcc
atgctgaaggggatcttattgatggaagctgaagaaagtcttagccatcttgtgcagaac
atacaggacaaatatgatggggacatatctcagtgttttgctgaagatttagagtctctt
attgaggccagacttcagcttgctgctatttctcagcaaaggcatcacgcagctctcagt
gttgctttggctttctctacaattcgacttctccaagatgcaaaaatttttaggatggaa
gtgacacattttcaagaagaaaaggatgaatgggagtgtttggactgtaacgttgaagat
gttcgactgacacacagtgtaatagcacgagaacatatgaatgtacgtctgtggctaagg
tgtcgtacaatgctagtgactgcactaataagacagatatatggcgctggtgatatggaa
gaaaatattgtggctgaacgcagaagtgtgataaaagaagcaatacttgaggcagaagcc
tttggtgatattgagactcaggctgaaatgatggtgcaagctgctcttcttgacctgcaa
gaaaaatgtcccgtgacaggcattaaacttctattggagaatatcatcagtttactccaa
gaggatacatttatttcccctccagcttctttgactcttgtgaaaagtatgcttctgctg
gcagatatactagcagtggaaacagcagaggattcagaacattggtcctcaacagtggaa
ccactaaacttactgattttggcacatgagcttaccattaaagcattttttgtttatgga
caacctattgaacggcaaatagaagacaatacattgacttgcctggtcctgcctacaaaa
aacatctacttgccacatatcaacacgctagcacaagtcaaaatgagaattggatgcata
ttagctgaaaaagtagcttgtacacctgcaagaagagatccactgcaatggctatgtgct
ctcaaacatttagaatcagcattgaagctttgcagagcagctgcaacaaaacaactggat
atggaagctgaacttctttttcagataggtaaggtagaacgccagataacggaagcaggc
aataacaagtcctttcaagctgttgaaaccctgtcagaagctataaaactcagccagcaa
catgatcaaaaatttgagttaataagaagatcataccttgaaatagccctattatatttg
cattttgccacaaatgatgagggtgtgtcagcgaaagataagatggtaccttccaaatca
aacatgtcacctggagaactctcttccactgaggaggctctgaaatcagaggactacaaa
gtacgagcctggattgcagtaagagcagctacacaggtcagtgaagctgcaattgcttct
cagctattaattggaatgcagagtgttaaagaacacagcatgaaggatgaaatgcgtcag
aaaatcccggaatttgcttccatggatcttcttgcttcatacagagatttcttatctgat
ggatacaatgttgtctttgacaatcccaaagcatcttctaccaaaaaaacccaaatggta
gatgacaagcagagccaaagtgaaggaactgaaagccttgccaccacggccagccagaag
aaagagacaataacatggattcacttaattcactaccacagctttttaagaagactttat
aacatgaacattctagttgctgcccctgactcaggacctggatcattttctgcaagagat
ggacgccttagttctgtttttgacacagggattgttctacacatagcagaaatgcattcc
tttcttaaaaaatatttgcctggatactcaatgtgctctgttgagaatttcccagaagag
ctacgtgatgtagaattgccacttaatagggcagctgattcttcaaagatgtctgttgaa
gttactggaattgcatcaaagatgtcacgtgtaagaacagcttctctcgtttctctcatc
acagaagcagacagtcagatggagagtagggcagcaaatgcttcaaataaggaaattaac
attcagtggtacattccttctctggcaaagccatcggacgatacagagactaaggttttg
ctgctttatgcttataatacaaagcctgtcaagattaacaacatcaagactttcagttca
atgtctatgttttcaggctacttgtggattccattggctagaattatttctttacagaag
aaattatcaaacctgaagcagcaagttgaaaatttgatgcaaaattctgaaagcttgtca
gcagcttcagaacctacaagttttcttgaacaaggtgaaagtttgaaaaaaaatccttca
gaaaaacccaaaatgaatgttgcaaaagtgcaccttgatgaaaaaacagaagaaatggct
aaaaggtgtttatctgaagtcaaagcactgctgtctgctgttccagccctgtccttgccg
ttaactgagatcccatttgagattactttgcaatcaatagcaagtttgggagatatgttt
gatcctgccagtggatgtataataactgaagaaagtcttttcaactggatcatttctctg
tttcactaa
DBGET
integrated database retrieval system
