Cuculus canorus (common cuckoo): 128852252
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Entry
128852252 CDS
T08597
Symbol
VTI1B
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
128852252 (VTI1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cuca04131
]
128852252 (VTI1B)
Membrane trafficking [BR:
cuca04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
128852252 (VTI1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Laminin_II
YqjK
Fusion_gly
DUF3958
Cir_Bir_Yir
RSS_P20
KxDL
Motif
Other DBs
NCBI-GeneID:
128852252
NCBI-ProteinID:
XP_053923369
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All DBs
Position
5:complement(57510810..57521631)
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AA seq
232 aa
AA seq
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MAGRGSGSSEHLERLHEIFRGLHGELRGGSERLRSGAAEEKKKLLREFDEKQREANETLR
EMEEELKYAPLPFRNQMMSKIRAYRRDLSMFQREIRSTDLGLGLGNQGDIKYGIFSTENE
QSTNLQSQRVLLLQGTDSLNRASQSIERSHRIAAETDQIGTDIIEELGEQREQLERTKSR
LVNTSENLSKSRKILRSMSRRVITNKLLLSMIIILELAILGGVVYYKFFRSI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgggccgcggctcgggctcctccgagcacctggagcggctgcacgagatcttccgc
gggctgcacggagagctgcggggcggctccgagcggttgcggagcggcgcggccgaggag
aagaaaaaactacttcgagaatttgatgagaaacagcgtgaagcaaatgaaacgctgcgg
gaaatggaagaagaactgaagtatgctcctctgcctttccggaaccaaatgatgagcaaa
atccgggcctacagaagagacctctccatgttccagagagagattagaagcacagatttg
ggattgggccttggaaatcaaggcgacataaaatatggaatcttctccacagaaaatgaa
cagagtaccaatctgcagtcacagagggtgctgcttctccagggaacagacagcctgaac
agagccagtcagagcattgagcgatcacaccgaattgctgctgaaacagaccagattggc
actgacataattgaagaacttggggagcagcgagagcaactggaacgcaccaagagcaga
ttggtaaataccagtgagaacttgagcaagagtcgcaagattctgcgttccatgtccaga
agagtaatcacaaataaactgttgctgtcaatgatcatcatcctggaactagccatccta
ggaggtgtggtctactacaagttctttcgcagtatatga
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