Cuculus canorus (common cuckoo): 128853253
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Entry
128853253 CDS
T08597
Symbol
OGG1
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
128853253 (OGG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cuca03400
]
128853253 (OGG1)
Enzymes [BR:
cuca01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
128853253 (OGG1)
DNA repair and recombination proteins [BR:
cuca03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
128853253 (OGG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
Motif
Other DBs
NCBI-GeneID:
128853253
NCBI-ProteinID:
XP_053932455
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All DBs
Position
11:8859076..8861566
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AA seq
343 aa
AA seq
DB search
MRLRTASGTCPRLWRALPCPPAELRLDLVLPSGQAFRWRESSPGAWTGVLAGRVWTLRQE
RDRLWYTVYGEEEEDGRPTGAAKPHSAETDQILRDYFQLDVGLQALYRTWGAADPLFREV
ADDFPGVRVLRQDPVECLLSFICTSNNHISRITAMIERLCQAFGRRLCCLDGQPFHAFPS
LSALTGADAEAQLRALGFGYRAKFVSGSARAVAEGIGAEGLCRLRAAPYAEARRVLCALP
GVGTKVADCVCLMALDKAEAVPVDTHVWRIARQRYGAALGGKSLTPRAHQEIGDFFRGLW
GSHAGWAQAVLFCADLRKGQEPAGSRDQNWEGCGQDSCRDGPR
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcggcttcgcaccgcctccggcacctgcccgcggctgtggcgggcgctgccctgcccg
ccggccgagctgcgcctggacctcgtgctgccctcggggcaggcgttccggtggagagag
agcagccccggcgcctggaccggggtgctggcggggcgcgtgtggacgctgcggcaggag
cgggaccggctctggtacacggtgtatggcgaggaggaagaggatgggcgtccaaccggg
gcagcgaagccacacagtgccgagacggaccagatcctgcgtgactacttccagctggat
gtggggctgcaggcgctgtaccgcacctggggagcggccgatcccctcttccgcgaggtg
gctgatgacttcccaggagtgcgggtgctgcggcaggaccccgtcgagtgcctcctctcc
ttcatctgtacctccaacaaccacatctcccgtatcaccgccatgatcgagcggctctgc
caggcctttggccgccgcctctgctgcctcgatggccagcccttccatgccttcccctcg
ctctcagcactcacaggcgctgatgctgaggcccagctgcgggcgctgggctttgggtac
cgcgccaaattcgtcagtgggagcgcacgagccgtcgctgaggggattggcgccgagggg
ctgtgccggctgcgtgccgcaccgtatgctgaggccaggagggtgctgtgtgccctgccc
ggcgtgggcactaaggtggccgactgcgtctgcctgatggccctggacaaggcagaagcg
gtgccagtggacacccacgtctggcgcattgcacggcaacgctacggtgcagcactgggc
ggcaagagcctgaccccccgggctcaccaggagatcggcgatttcttccgggggctgtgg
ggttcccatgccggctgggcgcaggcagtcctcttctgcgctgacctccgcaagggccag
gagccagctggcagccgggatcagaactgggagggctgtggccaggacagttgcagggac
gggccccgctag
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