Cuculus canorus (common cuckoo): 128853516
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Entry
128853516 CDS
T08597
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cuca
Cuculus canorus (common cuckoo)
Pathway
cuca03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cuca00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128853516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cuca03021
]
128853516
03036 Chromosome and associated proteins [BR:
cuca03036
]
128853516
Transcription machinery [BR:
cuca03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128853516
Coactivators
SAGA/TFTC/STAGA complex
128853516
Chromosome and associated proteins [BR:
cuca03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128853516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
128853516
NCBI-ProteinID:
XP_053935042
LinkDB
All DBs
Position
13:complement(3024159..3152776)
Genome browser
AA seq
930 aa
AA seq
DB search
MAAGASDPLEEMLLFSDEVDEKAVSDLVGSLESQLAAGRSSAEAPQPRTSAPSQPPPRQG
SPVPPPPPPGRPAPPPAPEPASGGPAEPRAPAAAGAGRAASVNSSSVQQSLPRAPSPAAP
PARPLHVPARDAASPGGSPPAAAAPAPPQRAQPAGSANGDPADASPAAAVRAADPQPKLP
ALGGSASPAPAAAPGPAALANGAAAKAAAGGASKPGGALPAAPQALSPRPAPPAPRLVAP
QLIVRPPQQTTIQLPPGFTIPPGMVLVRTDTGQLVMVPQQALAQAQMQAQVQTQGQGPTS
ISPRLSVPTTGPVFRLSTAQQPTSVATSTVRLGLPVQAKVVQSTAAPVSATSAVTLPGGS
ILSHTTVSVATTSAQNLFKTTVATGTAASQQPAVITGGQTQSSAQNQGQPRLPLPPHTAA
QVPAQPQVIPSSPVPGTTVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSRNVKALVQ
DLLDAKIDPEEFTGRLQSELKSSPQPYLVPFLKKSLPALRQSLLNSQHSVLQGQPPQQSL
QQTKLSQVIPQSASGSISSVVTTQTIGIRQPNNICTVSVSNTVQPPQVKVVQSNQSSQLQ
IIQSTSAQTVKRNPACQTTQIRMPVVITQTIRPQGTVGKAPTIQASKSPGGFGVQVSANQ
KNKLNDPGGGSFRDDDDINDVTSMAGVNLNEESARIMATNSDLVGTQIQSCKDEPFLAAV
PLHKRILEMAKKLGITDVPAEVVTFISHATQNRLRTVIEKVTVITQHRMESYKDDEWYEQ
ATDVRSQLKFFEQLERLEKQRKDEQEREILLKAAKSRSRQEDPEQARLKQKAKEMQQQEL
AQMRQRDANLTALAAIGPRKKRKLDSPGLLSAGGEGLGVSGGGQAGLGAPSSRQYARQKI
TRVNLRDFIFYMEQERETSHSLLLYRALLK
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgcctccgaccccctggaagagatgctgctcttctccgatgaggtggac
gagaaggcggtcagcgacctggtgggctccttggaatcgcagctggccgccgggcggagc
tcggccgaggcgccccagcccaggacctccgccccgtcccagccgccgccgcgccagggc
agcccggtcccgccgccgccgccgccggggcgccccgcgccgcccccggctcccgagccg
gcgtcgggcggccccgcggagccccgagccccggcggcggcgggcgcggggcgggcagcg
agtgtaaacagtagtagcgtgcagcaatcactcccgcgcgcccccagccccgccgcgccc
cccgcccggcccctccacgtgcccgcccgcgacgccgccagccccggcggcagcccgccc
gccgccgccgcccccgccccgccgcagcgcgcccagcccgcgggcagcgccaacggcgac
cccgccgacgcctccccggccgcggccgtgcgagccgccgacccgcagcccaagctcccc
gccctgggcggctccgccagccccgcgcccgccgccgcgccgggaccggccgcgctcgcc
aacggcgccgcggccaaagcggcggcgggcggcgcctccaagccgggcggcgccctcccc
gccgccccccaggctctgtcgccccggcccgcgccgcccgccccgcgcctggtggccccg
cagctgatcgtccggccgccccagcaaaccaccatccagctgccccccggcttcaccatc
ccgcccggcatggtcttggtgcgcacggacaccggacagcttgtcatggtgcctcaacag
gctctagcgcaggcgcagatgcaggctcaagtgcaaacgcagggacagggtcccaccagc
atttcaccgagactttcagtgcccacaactggccctgtgtttcgcctgtcaacagctcag
caaccaacgtctgtagccacatctactgtccgcctgggactcccagtgcaagccaaagtt
gttcagtcaactgctgcccctgtcagcgcgacgtctgcagtgaccctgccaggaggctct
attctttcacacacaaccgtatcagtagctacaacgagtgctcaaaatctattcaagaca
acagtagcaactggaacagcagcttctcaacagcctgcagtaattactggtggacaaact
caatcttcagcacaaaaccagggtcagcctcggctgccgcttccccctcacacagcagcg
caagtaccagcacagccccaggtcataccgagctctcccgtacccggcactacagttgta
tcacaggaaatgcaagagaatgtgaaaaaatgcaaaaactttttagctacccttataaaa
cttgcttctcataattcaccatctccagaaacgtcccgtaatgtgaaagctctggttcaa
gatttgttggatgcaaagattgatccggaagaatttacaggccgccttcaatcggaactc
aaatcatctcctcagccatatcttgtacctttccttaagaaaagtctacctgcattgaga
caatcgttgctgaatagtcagcattcagttttgcaaggacagccgcctcagcagtcactt
cagcaaaccaagctctcacaagttatacctcaatctgcctctggaagcatttcctctgtt
gtcacaacgcagacaataggaataaggcaaccaaacaacatttgcacagtgtctgtatca
aatacagtgcaacctcctcaggttaaggtggtacagtcaaatcagagttctcaactgcag
attatccagtcaacatctgctcaaactgtgaaacgaaaccctgcttgccagactacccag
attaggatgccagtggtaataactcagaccattagaccacaaggcacagtagggaaggca
ccaacaatacaagccagcaaaagtcctgggggctttggtgttcaggtctctgcaaatcag
aaaaacaagctgaatgaccctggaggtggttctttcagagatgatgacgacatcaatgat
gttacctctatggctggcgttaatcttaatgaagaaagtgcccggattatggctaccaac
tctgatttggttggaacccagatacagtcctgtaaagatgaaccctttcttgctgctgta
cctctacataaacgcatacttgaaatggctaaaaaactaggaattactgatgtgccagct
gaggtcgttacttttatttcccatgcaacacaaaacagattaagaacagtgatagaaaaa
gtaacggtgataacccagcaccgaatggaatcgtacaaagatgatgaatggtacgaacaa
gctacagatgtccgatcccagctgaagttttttgaacagctggagcgcttagaaaagcaa
aggaaagatgaacaagagagggaaatcttgctaaaggctgccaagagtcgctcgaggcaa
gaagacccggagcaagctaggctgaaacaaaaagcaaaggagatgcagcaacaagaactt
gcacaaatgaggcagagggatgccaatctaactgcgttggcagctatcggtccccggaag
aaacggaagcttgactcgcctggactgctttctgcaggaggagagggcctcggcgtgtcc
ggcgggggccaggccggcctgggggctccttcatccaggcagtacgcacggcagaaaata
acgcgcgtaaacctcagggacttcatcttctacatggaacaggagagagaaacgagccat
tctctcctgctctatcgagctctgcttaaataa
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