Cheilinus undulatus (humphead wrasse): 121503490
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Entry
121503490 CDS
T07473
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121503490 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121503490 (cpsf4)
03019 Messenger RNA biogenesis [BR:
cud03019
]
121503490 (cpsf4)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121503490 (cpsf4)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
121503490 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
121503490
NCBI-ProteinID:
XP_041633874
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All DBs
Position
21:7767717..7772206
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AA seq
266 aa
AA seq
DB search
MQELLANVDHIKFDLELAVEQQLGAQPLPFPGMDKSGSAVCEFFMRAACIKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGASEQPP
LPQQTQNQTKPVPTIGRSSLSLIQLTSSSPGQRPQNNTPMGMGQQNNMMGNRGPRPLDQV
TCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctactggccaacgtggatcacataaagtttgatctggagttggcggtggag
cagcagctcggggctcaaccgctacctttccccggcatggacaagtctggatcagcggtg
tgcgaattcttcatgagagctgcctgcattaaaggtggaatgtgtccattcagacacatc
agcggagagaagacggtggtgtgtaaacactggctcagaggactctgtaagaaaggagac
cagtgcgagttcctccatgaatacgacatgaccaagatgcctgagtgctacttctactcc
aagtttggtgaatgcagtaacaaggagtgcccattcctgcacatcgaccctgagtcaaag
attaaagactgcccttggtacgaccgtggattctgtaaacatggtcctgactgcagacat
cggcacaccaggagagtgatttgtgtcaactacctggtcggtttctgtccagaagggaaa
tcctgtaaatttatgcatcctcggtttgagctgccgatgggagcgtctgaacagcctcct
ctgcctcagcaaacacagaaccagacaaagcctgtgccaacaatcgggcgctcgtccctc
tcgctcatccagctcaccagctccagtcctggtcagcgacctcagaacaacacacctatg
ggaatgggccagcagaacaacatgatgggtaatagagggccacgcccactcgaccaggtc
acctgctacaagtgtggtgaaaaaggacattatgccaataaatgcaccaaaggtcacctc
gctttcctcagtggacagtaa
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