KEGG   Cheilinus undulatus (humphead wrasse): 121503575
Entry
121503575         CDS       T07473                                 
Symbol
thoc6
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03013  Nucleocytoplasmic transport
cud03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121503575 (thoc6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    121503575 (thoc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cud03019]
    121503575 (thoc6)
   03041 Spliceosome [BR:cud03041]
    121503575 (thoc6)
Messenger RNA biogenesis [BR:cud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     121503575 (thoc6)
Spliceosome [BR:cud03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121503575 (thoc6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40_CDC20-Fz WD40 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd Beta-prop_EML_2 Beta-prop_EML WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_SCAP NBCH_WD40 Beta-prop_NOL10_N Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_WDR90_POC16_2nd Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_NUP159_NUP214 Herpes_gI DUF5654 CATSPERD-E_C
Other DBs
NCBI-GeneID: 121503575
NCBI-ProteinID: XP_041633978
LinkDB
Position
LG21
AA seq 323 aa
MGPVELLHMSVFSQSFSPCGRFLAAGNNYGEIALFSLSAALSPDATSLSQKPVLTFTAHE
GPVFSLLSTDCHLISAGNGEISAWSWTELIKKNVKPLWTKRPNYKSSLEIPEINAMIMNP
RDNSLVVGGGDNNIHILDLEHGVFKSVLQGHSDYVHCVSVREREAEILSGGEDGAVRIWD
SRTGQCVHCIEVYRYESCARPQYGKWISCVTTDSDWMLCGGGPSLSLWHLRSLSPTSIFP
LKGCQRQATFHQDMILSVGEGPFVSHCLLGGDVKAQIPCTPQSLNTLQLNTNSTEHRVLT
VGGSSNRIDVFTNLSYRAFSLSF
NT seq 972 nt   +upstreamnt  +downstreamnt
atgggtcccgtagagcttctccacatgtccgtgttctctcagagtttctctccttgtggt
cgattcctggcagctggaaacaactatggagagatcgccctcttcagcctctctgcagct
ctgagcccagatgctactagcttgagtcagaaacctgtccttacattcacagctcatgag
ggtccggtgttctctcttctctccacggactgtcacctcatcagcgcaggaaacggggag
atcagcgcctggagctggactgagctaatcaagaagaatgtcaaaccactgtggacaaaa
agaccaaactacaaatccagtctagagatccctgagatcaatgccatgatcatgaacccc
agagacaacagtctggttgtcggaggtggggacaacaacatccacattctggacctggag
catggagtcttcaaatcagtgctgcagggccactcagactacgtccactgtgtgagcgtg
agagagagggaggcagagatcctgtctggaggagaggacggagccgtgagaatttgggac
agccggacgggtcagtgtgttcactgcatcgaggtgtacagatacgagagctgtgctaga
cctcagtacgggaaatggatcagctgtgtgacaaccgactcagactggatgttgtgcggc
ggaggtccatctctgtctctgtggcatctccgctctctgtctcctacctccatcttcccc
ctaaaaggctgccagagacaggccaccttccaccaggacatgatcctgtctgtaggtgaa
ggcccgtttgtgtctcactgtctgctgggcggagacgtcaaagctcagatcccctgcacg
ccgcagagcctgaacacgctgcagctcaacaccaacagcaccgagcacagggttctgacg
gtgggcggtagcagcaatcgcatcgatgtgtttacgaacctgtcatacagagcgttctca
ctcagcttctga

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