Cheilinus undulatus (humphead wrasse): 121504154
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Entry
121504154 CDS
T07473
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121504154
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cud04990
]
121504154
Domain-containing proteins not elsewhere classified [BR:
cud04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
121504154
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
DUF7130
Motif
Other DBs
NCBI-GeneID:
121504154
NCBI-ProteinID:
XP_041634726
LinkDB
All DBs
Position
LG22
Genome browser
AA seq
1607 aa
AA seq
DB search
MGTGDYICVTLRGGAPWGFTLREGEGDTYRPLIVTQVEEDGRAFLAGVRNDDEAVSLNGE
PCADLTLLQALELIHTSIDCVQLLVKRYSAISSEDSESQGTSCGEKDSTGEVQESTTLHI
VSSKHRSQSPTELFISESQDEVSYGELDSDTEFPKKPQLICTELHAPSSGDQRGQEGNNE
VAWRCLSPGDMVELQVSLSEQTLDEAGCTSLGSALGIEGDLSNREAIITVPTTTTTYMPS
SVREPLGQRGVVLSSPSMLGQVEVILQQQPAASGAGRGILSVGGPKVGGSVESQSEGEEG
GGHCEGVPGSLTVSFKVPSEEGTPAEEQDSDSEGDQDKPNKHRARHARLRRSESQSEKQL
KEAKSKCKRIALLLTAAPPNPNNKGVLMFKKHRQRAKKYTLVSYGTGEDDHEYSDEEDEE
NEEDKQGTQTVEFTLLAPNNSELDKQFLANAQGGKGALTINWDKGLLEIERNLKNQAEME
CLPETKGKGALMFAQRRQRMDEISAEHEELRRHGIPVEGVLEAEKKKAEQSYMQSTTESH
AYMDVNIHQQSQQQPQYQQYQEQQYYEQQQNYQQQQQQYQQQQQQYQQQYQQQQQYEQQY
QQQQMYQQQQEYHQEQQQMQQYSTNINGTVQHHTNEMQSSFSNRTAKPFSAENMTSTPYS
PAVSGTNQDSMGQGEQIASRDERISTPAIKTGFLMDARRRIAGKPMFTFKEAPKVSPNPA
LLNLLNRGDKKLGFESGPEEDYLSLGAEACNFLQSSRGKPKIPPPVAPKPVINPNSPPWS
PQIEMTNQDMPQQAENSVSTPAVAPTAQTTLAPELEPTPAPVPEPSPPLALQEAPAKTMP
EEQQTWTPQPESQPTSLQVPSHEENGHMNSALQPEQAPVTSWAVAQTQPQQQPPANSWNP
TQVQPQEPPPSQSPPQPPWVTRQPPQPQAQVQPPTNTWSAQIQPSWTQPQEQAQAPTQAQ
PPWVQPQEPSHSQPHYQQPWAHAHEQANMQQMQPSWSQPQEPIQQQPQAPWAQPSQAESQ
PQPPWVTPQQQKPQPPWVQPDSQPQPPWVQQPQHQAPQQAWPQAQAPGQPQPSWVSAQPQ
QQQQPQMNTWSPTQNQAQVQPPWVQAPQAQPPTQPQANLNPWAPVPAQVESQPSWSQPPL
EHGQHPMNSWTQDQNPAQQQPPWAQPVPSQAPQSNWQPSPSATPPQPPMNTWPSAQTQPQ
TPINAWAPQTQQAPVNASTSILNPRPSPKPWNPPQSSPRSRTPPPPPQRMHSFTIGQRVS
SPINPMATVLVPSSQGPAYEMPVVRGKGADMFAKRQSRMEKFVVDSETVEANKASRSTSP
VASLPNEWKYTPNVRAPPPRAYNPIQSPSYPPAATKQPPPGSPSTKAKKKGKDKPAPAPK
PLNVVDVMKHQPYQLDSSLFLFGPAAEAAKAAAAAKAECPPPNPPVETQPIQYEQMAPVQ
QPGPYNAPYPQQAYGMPMQPMMHDGHYQQNLANVYPPPNPYQQPPGVPYQQAYQQQYQQP
PPPPYQPQSPQSPNPPYQQAPYQQPNSAHYQQAPQAPYQPANSPPYLAAPSVPYQPQPPS
TFVAPSFPIAARPESASGGNPMTAPKPKFTAKKSSAQVWKPTAVQKE
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggggattacatctgcgtgacgctgcgtggtggtgccccctggggattcacc
ctgcgggagggagagggagacacatatagacccttgatagtcacacaggtagaggaagac
ggccgagccttcctggctggagtgcgtaatgatgatgaggcggtgtcacttaacggagag
ccatgtgctgatctcaccctgttgcaggccttagagctcatccacacatccatcgactgt
gtgcagctgcttgtcaaaagatacagtgccatctcgtcagaggacagtgaatcacaaggg
acatcttgtggtgagaaggactctactggtgaggttcaagagagcaccaccctccacatc
gtctcctcaaagcaccgctcccagagcccgacagaactcttcatatctgagtcccaggat
gaggtctcctatggagagttggatagtgatacagagtttcccaagaaaccccagctgatt
tgcacagagctacatgctccctcatctggtgatcagagaggccaggagggcaacaatgaa
gttgcatggcggtgtttgtcccctggagacatggtggagctccaggtttccctctctgag
caaaccttggatgaggcgggctgcacctctcttggaagtgctcttgggattgagggagat
ctttcaaacagagaggctatcataacagtcccaaccactactacgacttacatgccaagc
tctgtgagagagccacttggccagcggggagtggtgctcagctccccttccatgctgggg
caggtggaggtcattttgcagcagcagccagcagcatcaggagcagggaggggcatcctg
agtgtgggtggccccaaggttggaggaagcgttgaatcccaaagcgaaggagaagaagga
ggagggcactgtgagggagtccctggatcattgactgtctcattcaaagttccctcagag
gaggggacaccagcagaggagcaggactctgattctgagggggaccaagacaaacccaac
aaacaccgggcaagacatgcaaggctcaggagaagcgagagtcagtcagagaagcagctg
aaagaggccaagtccaaatgtaagcgtatcgcccttcttcttacggctgctccgcccaac
cccaacaacaagggggtgttgatgttcaagaaacatcggcagagggccaagaaatacacg
ttagtgagctacggcacaggagaagacgaccacgagtacagcgacgaagaggacgaggaa
aacgaagaggacaaacaaggaacccaaactgttgaatttacccttttggctccaaacaat
tctgaactagacaagcaattcctggcaaatgcccaaggtggaaaaggtgcactaacgatc
aactgggataagggtctccttgagatagaaaggaacctgaaaaaccaagcagagatggag
tgtttgcctgaaaccaaaggcaagggtgccctgatgtttgcccagcggcgtcagagaatg
gatgagatttctgcagaacatgaggagctcaggcgccatgggattccagtggagggagtg
ctggaggctgaaaaaaagaaagctgagcaatcctacatgcagtctactacggagagccac
gcttatatggatgtaaatatacaccaacaaagccaacagcagccgcagtaccagcaatat
caggagcagcagtactacgagcaacaacagaactaccaacaacaacagcagcaataccag
caacaacaacagcaataccagcaacaatatcagcagcagcagcagtatgaacaacagtat
caacagcagcaaatgtatcagcagcagcaagaatatcaccaagagcaacagcagatgcag
caatattcaacaaacatcaatggcacggtccagcatcacaccaatgaaatgcagagctct
ttcagcaatcgtacagcaaagcctttttcagctgaaaacatgacgtctaccccttattct
cctgcagtgagtgggaccaatcaagattctatgggccagggggagcagatagcttctcgg
gatgaacgcatttctacccctgcaattaagactggctttctgatggatgcaaggagaaga
atcgcagggaagccgatgttcacttttaaggaagcaccgaaagtatcacccaatccagct
ttgctcaacctcctgaacaggggggataaaaagttgggctttgagtcaggccctgaggaa
gactaccttagccttggagctgaggcttgcaatttcctccagtcttcaagaggtaaaccc
aagattcctccaccagtggctccaaagccagtgatcaatccgaattctcctccatggtcc
ccacagatagaaatgaccaaccaggacatgcctcaacaagctgaaaatagtgtgtccaca
cctgctgtagcccccaccgcacagactacccttgctccagaactagagccaacccctgca
cctgtccctgagccatctccccctcttgccctgcaggaagctcccgccaaaactatgccc
gaggagcagcagacatggactcctcagccagaatcccaaccaacatctttgcaagtgcca
tctcatgaggaaaatggtcacatgaattctgccttgcaacctgagcaagctcctgtgact
agctgggctgtagcacaaacacaacctcaacaacagccacctgccaattcatggaatcca
actcaagtgcagccacaggaaccacctccaagtcagtccccaccacagccaccttgggtg
acacgtcaacctccgcagccacaagcacaggttcagccacccacaaacacttggagtgct
caaattcagccttcttggactcagcctcaagagcaagcacaagccccgacacaggcgcag
ccaccctgggtccagcctcaagagccatcccattctcaaccccactatcagcagccctgg
gcacacgctcatgagcaggcaaatatgcagcaaatgcaaccatcttggagtcaacctcaa
gaaccaatacagcagcagccccaggccccatgggcacagccatcacaagcagagtctcag
cctcaaccaccatgggtgacaccacagcagcaaaaaccacagcctccttgggttcagcca
gactcccagccacaacccccatgggttcagcaaccacagcatcaggctcctcaacaagcg
tggcctcaggctcaagcaccaggccaacctcaaccatcctgggtatcagctcagcctcaa
cagcaacaacaacctcaaatgaatacatggtctccaacacaaaatcaagcccaagttcag
ccaccttgggtccaagcaccccaggcacaacctcctactcaaccccaagcaaatttaaat
ccatgggcaccagtacccgcacaggttgaatcccaaccatcatggagccagccccctctt
gaacatgggcagcatccaatgaattcttggacccaagatcaaaaccctgcccaacaacaa
ccaccttgggcccaaccagttccaagccaggcaccacagtcaaactggcaaccatcccct
tcagcgactcctccacagccaccaatgaatacatggccttcagctcagacacaacctcaa
acacctataaatgcctgggcaccacagacacagcaggcacctgtgaatgcttcaacgtca
atactgaacccacgtccttctccaaaaccttggaatccaccacaaagttcaccccgaagc
cggacccctccacctccaccacaaagaatgcactcttttaccattggtcaaagagtttca
tcgcccattaacccaatggccaccgtcttagttccatcatcccaaggtccagcttatgag
atgccagtggttagagggaagggagctgatatgtttgcaaagaggcagtcccgtatggag
aagtttgttgtggactctgagactgtggaagcaaataaggcaagccggtcaacatcgcca
gttgcttctttacccaatgagtggaagtatacacccaatgtacgtgctcctcctccaagg
gcttacaatcctattcagtccccttcttatcccccagcagcaacaaagcagccgcctcca
ggcagcccctcaaccaaagccaagaaaaaagggaaagacaagccagcacctgcccccaaa
cccctcaatgttgtagacgttatgaagcatcaaccctatcaacttgattcttcactcttt
ctctttggcccagcagcagaggctgccaaggctgctgctgcagctaaagctgaatgtcca
cctcctaacccaccagtcgaaacccaaccaattcaatatgagcaaatggctcctgtccag
caacctggaccatataatgccccttacccacagcaagcctatgggatgccaatgcagcct
atgatgcatgatggccactaccagcaaaacctagctaatgtttatcctccccccaacccc
tatcagcaacctccaggtgttccttaccagcaagcatatcagcaacagtatcagcaacct
cccccacccccttatcaacctcagtctccccagtctccaaaccctccataccagcaggcc
ccttaccaacaaccaaatagtgcccattaccagcaggctccacaggccccttaccaacca
gccaatagccctccctacttagcagctccttcagtaccttaccagccacagcctccatct
acttttgttgctcccagttttcctatagcagcaaggcctgaatctgcttcaggtggtaac
cccatgactgctcctaagcctaagtttactgctaaaaagagctcagctcaggtgtggaag
cctacagcagtgcagaaagagtaa
DBGET
integrated database retrieval system