Cheilinus undulatus (humphead wrasse): 121504533
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Entry
121504533 CDS
T07473
Symbol
col4a6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04382
Cornified envelope formation
cud04510
Focal adhesion
cud04512
ECM-receptor interaction
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121504533 (col4a6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121504533 (col4a6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121504533 (col4a6)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121504533 (col4a6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cud04147
]
121504533 (col4a6)
00536 Glycosaminoglycan binding proteins [BR:
cud00536
]
121504533 (col4a6)
Exosome [BR:
cud04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121504533 (col4a6)
Glycosaminoglycan binding proteins [BR:
cud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121504533 (col4a6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121504533
NCBI-ProteinID:
XP_041635329
LinkDB
All DBs
Position
22:28975183..29160124
Genome browser
AA seq
1698 aa
AA seq
DB search
MKLLICVIAVVLAVRSAHGGAKFDGPCAGLDCSGGCKCNPEKGSRGRPGPLGEVGQPGIE
GARGGPGPQGPKGEKGHIGLKGPSGPKGDKGPMGVPGFQGNDGVPGHPGQEGGRGPPGLD
GCNGTRGEPGDSGFGIGVPGSPGYAGPTGPKGQKGEPRYVSVDGFGSIPGSPGQSGQPGI
RGPEGPSGFPGPRGPDGYPGPPGPPGLPGPMGSRSDGYEGEKGDKGDVGLPGPSGTPGDG
SLTSEQTLTIYKGDKGEPGPKGFRGFPGSPGRPGPFGYRGEPGEKGIPGYPGGRGLPGFN
GAPGVPGQQGLRGTPGYSGQPGYIGPKGDQGDQGPPGPPAYISDYGSSVQGLQGTPGLSG
LPGAPGDQGPPGFQGPPGPPGIGGFGSGRPGAPGFPGTPGPKGEKGSPGIPSYGAEGLPG
SPGLPGPPGPPGPQGPTSSPDGPPTSYPGVPGQPGPRGEPGNTGFKGIRGEPGDCACLGG
GIPGLPGLPGAPGINGSPGFPGRKGEPGDTGSPGFNGVQGPPGRAGERGYFGRKGEKGAP
YFPTLGLGVKGEIGSPGPRGPIGETGKPGRDGLPGFPGAPGPPGDAGYGTVGEKGFPGFP
GAKGLPGGPGEPGIGYLGTPGFRGADGEPGIPGLPGPPGLPGPRGETGCGGVNDAGEGTG
QVLPCTIPGEDGDPGVPGIPGRPGSKGQPGQPGGPGRPGFDGAKGERGDPGFGGQPGPQG
FPGPRGDSGIPGTPGRSFEGGRGKDGVPGRPGAKGQPGEVLGATPGAPGRDGLPGLSGDK
GQPGTPGGPGLPGGDGRFGIPGQKGERGGDGFPGIPGLPGPPGEPTGGITGPPGARGNPG
LSGPPGCSGFPGRKGDRGDPGFPGPAGMKGTPGLPGTPGTPGPVGPPGPPGPGTREGIPG
IPGPKGERGFPGLMGFPGLPGRPGSPGFPGGKGAAGGPGRDGFLGGPGFPGLKGDRGYPG
LPGLPSPPYRSEFVEKGALGTPGVNGVPGFTGPRGDKGLPGLPGRQGLPGLPGFAEQSKG
QPGQPGFPGRPGSPGFPGPKGEGGIMGFPGMTGPRGDDGAPGLPGNPGEFGRPGGKGQPG
DTFGYPGGPGAKGQPGDAGYPGGRGNDGAPGDNGFPGSPGFSAAKGAPGEGGRPGINGSP
GFPGPKGQQGFPGSRGPDGSPGLPGGPGGPGAKGLPGPPGLDGLNGLGGPKGLPGTPGGS
AGGRPGAPGTQGQKGERGVSFPGGPGFPGPKGERGDSGGQGLPGFPGRPGLPGPTVGSDV
PGPLGDPGLPGLDGEYGFQGPPGPPGPPGPGSIQGDRGDGGLPGFPGSPGKKGEPGLNGG
PGLSGSPGFKGERGETGFSGGPGLKGFSGDSGYYGNKGAKGLRGRPGRKGIPGITLNVPP
PEFRPFGEVGFPGENGLPGGSGDSGQPGLPGRSGPKGRPGSVGKLGRTGSPGLPGFVGDP
GPPGFPGPTGEQGLPGKAGLPGSPGSVGRSFSIGYTLVKHSQDSRVPMCPQGMAKLWDGY
SLLYVEGQEKAHNQDLGQPGSCLPRFSTIPFLYCSPNEVCYYASRNDKSYWLSTTAPIPM
MPVAEEQIRPYISRCSVCEAPSQAVAVHSQDLTIPNCPPGWRSLWIGYSFLMHTAAGAEG
GGQSLVSPGSCLEDFRATPFIECNGAKGTCHYFANKYSFWLTTVDPGLEFVYSPAQETLK
GGQERSKVSRCQVCSKIL
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcctgatttgtgtgatagctgtcgtcctggctgtgagatctgcgcacggaggt
gccaaatttgacggaccatgtgcaggtttggactgtagcggtggatgcaagtgcaacccc
gagaaaggcagcaggggtcgtcctgggcctcttggggaggttggccagcctggaatagag
ggagcacgagggggtccagggcctcaaggacctaaaggagagaagggccacatcggactg
aaaggaccatctgggcccaaaggagacaaaggaccgatgggagtgccagggttccaagga
aatgacggagtgcctggtcaccccggtcaggaaggtggcagaggacctccaggactggac
ggttgtaatgggacaagaggagaacctggagactccggctttggaatcggagtacctgga
agtcctggatatgctggacctactgggccaaaaggtcagaaaggagagccgcgatacgtc
tcagtggacgggtttggaagtattccaggatccccaggacaatcaggccaacctggtatc
agaggtcctgaaggtccgtctggtttccctggtccaaggggccccgatggttatcctggc
ccacctggtcctcccggtctcccagggcctatggggagtcgtagtgacggatacgaagga
gagaaaggagacaagggcgacgtgggtcttcctggacccagtggtactcccggcgacggg
tcgttaacaagcgaacaaactctcactatctacaaaggagataagggtgaacctggccca
aagggctttagaggatttcccggtagtcctggtagacctggaccttttggctatcgtgga
gaacctggagagaagggcattcccggataccctggtggaagaggccttcctggttttaat
ggagctccaggtgttccaggacaacagggattacgaggtaccccaggatactcaggccaa
ccaggatacatcggacccaagggagaccagggagatcaaggaccaccaggacctcctgct
tacattagtgattatggctcttcggttcaagggctacaagggaccccaggtctgagtggc
ttgcccggggcccctggtgaccaaggacctccaggatttcaaggaccaccaggcccacct
ggaattggtggttttggttcaggtcgacctggagccccaggtttccccggtaccccaggc
ccaaaaggagagaaaggtagtccaggcatacctagctatggcgcagaaggactacctggt
tcccctggacttccaggacctcctggacctcccggcccgcagggccctaccagttcacct
gatggtccccctactagttacccaggagtgcctgggcagcctggccccagaggggagccg
ggtaacacaggattcaaaggcatcagaggtgagcctggcgactgtgcctgcctaggaggc
ggcatccctggtttgcctggtttgcctggagccccaggaatcaatggcagccctgggttt
cctggtcgaaagggggaacctggtgacactggctctcctggcttcaatggtgttcaggga
cctcctggtcgggctggagagaggggttactttggtcgtaaaggtgagaagggagcacca
tacttccccacccttggtttgggggtgaaaggagagattggttctcctggacctagagga
ccaattggtgaaactggaaaaccaggcagagatggacttcctggttttcccggtgcacct
ggacccccaggcgatgccggctatggaacagttggggagaaaggttttccagggtttcca
ggggccaaaggtcttcctggtggtcctggtgagcctggcattggctatcttggaacacca
ggcttccgtggagctgatggagaacctggcatacctggattaccagggccaccaggttta
cctgggccaagaggtgaaaccggctgtggaggggttaatgacgccggagagggaacgggc
caagtgctgccttgcaccattcctggtgaggatggagaccccggtgtccctggtataccg
ggacgaccaggttctaaaggtcaaccaggtcagccaggaggccctggacgtccagggttc
gatggtgctaaaggagagagaggagaccctggttttggtggccaacctggacctcaaggt
ttcccaggacccagaggagattccggaattccaggtaccccaggaaggtcgtttgaagga
ggtcgaggcaaggatggagttcctgggcgtcctggagccaagggccagcctggagaggtg
ctaggagccacacctggagctcctggacgggacggtttgcctggattatcaggagacaag
ggccagcctgggacacctggaggacctggattacctggtggtgacggtcgctttggtatt
cctggacagaagggagagcgaggcggtgatggttttccaggtatcccaggtcttccagga
cccccaggtgagccgaccggtggtattactggtccgcctggagcccgtggaaacccagga
ctgagtggaccaccaggctgctcaggtttccctggtcgcaagggagacagaggagatcca
ggttttccgggacctgctgggatgaagggaaccccaggacttcccggcacccctggaaca
ccagggccagtaggacccccaggtcccccaggaccaggaaccagggagggaatccccggc
ataccaggacctaagggtgagaggggtttcccaggactgatgggtttcccaggtcttcca
ggccgtcctggatctccagggtttcccggaggaaaaggagctgctggaggccctggacga
gacggattcttgggtggcccaggatttcctggactgaaaggtgacagaggataccccggc
ctccctggcctgccctcacctccatatagatctgagtttgtcgagaaaggagcacttggg
acccctggtgtcaatggcgttcctggctttacaggacccagaggcgacaaaggtctgcca
ggtctgcctggtcgtcagggtctgcctggacttccaggttttgctgagcagagtaaagga
cagccaggacagcctgggtttcctggaagaccaggaagtccaggcttccctggaccaaag
ggagaaggtggaatcatgggattccctggcatgactggaccaaggggtgatgatggtgca
cctggtcttcctggaaaccctggtgaatttggccgtcctggtggcaaaggtcaacccgga
gatacttttggttatccaggaggtcctggagccaaaggccagccaggagatgcaggctac
ccaggcggccgtggcaatgatggcgctcccggtgacaacggttttccaggaagtccaggt
ttctctgcagcaaagggagctcctggtgaaggaggacgacctggtataaacggctctcct
ggattccctggaccaaaaggccagcaaggcttcccaggaagtcgtgggccagatgggtct
cctggactccctgggggtcctggaggtcctggagccaaaggtttgcccgggccccctggt
ttggatggacttaatggacttggtggacctaaaggccttcctggaaccccaggtgggagt
gcaggtggacgcccaggtgctccaggtactcaaggccagaagggagagagaggggtctcc
ttccctggaggtccaggcttccctggaccaaagggagagagaggagattcaggtggtcag
ggactcccaggattccctggacgaccaggacttcctggtccaactgtggggtcggatgtt
cctggacctttgggggaccccggtcttcctggacttgatggagaatatggtttccaaggc
cctccaggtcctccagggcctcctggtccaggctctatacagggagacagaggagatggc
ggtctcccaggcttccctgggtctcctggcaagaaaggagaaccaggcctcaatggaggc
cctgggctctctggcagtccaggttttaaaggagaacgaggtgaaaccggcttcagcgga
ggccctggtctcaaaggcttttctggtgactctggatactatggaaacaaaggagcaaag
ggactaagagggcgtcccggtcgcaaaggcattccaggaatcacgctgaatgtgccaccg
ccagaattccggcccttcggagaagtgggcttccccggtgaaaatggactccctggtggc
tctggagattccggtcagccaggactacctggacgctcaggacccaaaggccgtccaggc
tctgttggcaaacttggcaggactggatctcctggtctgccaggatttgtcggtgaccct
ggacctccaggtttccctggacccactggagaacaaggtcttccaggtaaagctggtctt
cccggttcccctggcagcgttggccgcagtttcagcatcggctacactctggtgaagcac
agtcaggactcccgggtgcccatgtgtcctcagggcatggctaagctttgggatgggtac
agtctgctctatgtggaggggcaggagaaggcccacaaccaggatctgggtcagccagga
tcatgcctccccaggttcagtaccatccccttcctctactgctcccccaatgaggtctgc
tactatgccagtcgcaatgacaaatcctattggctctccacaactgctccaattcccatg
atgcctgtggctgaggagcagatacgcccttacatcagcaggtgttctgtatgtgaggct
ccatctcaggctgtggcggtccacagtcaggacttgaccatccccaactgtccccccggc
tggagaagtctctggattggatactctttcctcatgcacacagcagctggtgcagaaggc
ggtggtcagtccctggtgtccccaggctcctgccttgaggatttccgtgccacaccattc
atcgagtgcaacggagccaaaggaacctgccactacttcgccaacaagtacagcttctgg
ctcaccactgtagaccccggcctggagtttgtctattcgccagcacaggagaccctgaag
ggaggtcaggagcgctccaaagtcagccgatgccaagtctgcagcaagattttgtag
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