Cheilinus undulatus (humphead wrasse): 121504565
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Entry
121504565 CDS
T07473
Symbol
focad
Name
(RefSeq) focadhesin
KO
K27498
focadhesin
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121504565 (focad)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
121504565 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HTH_1
Motif
Other DBs
NCBI-GeneID:
121504565
NCBI-ProteinID:
XP_041635386
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All DBs
Position
22:complement(9729935..9774545)
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AA seq
1804 aa
AA seq
DB search
MAESLKNRFDFHSPVIQAQTVRSLVAAVLKEKGPNGQITQSSTQGPALEALWQQCCSDSA
LVRSSCCDAVVLLVDQGHADLQYVLNSVLNLLPSARNVPGLVKVMGRLLQMQADQRDRGA
PFICPYSIRNSPHPFITAVENRADCWPALLLVIDDFIQRAADRNEPAYVTMLAPFLRYLY
CEPQRQPQHALLRHSLLRVLLPKPPGSAPENQNQDSSVSDSLLLCLCQLVPHMQVDSVES
MLELCGFIDALLQRLLSSSQERWQSEGVTLLLQLLCACQLCLKLNGDCRHLLSSIHQLIS
ACQQELPLDELLMGVALLLLEAPPAQQSSLLSLALSLIPEESEQCPWLSPVLVLPILQLL
SCLSLTEALADRRIHNLNQELGHKLLQRVSRETEKPGQSSPSLPFPLTSWFSELSLAVSV
LRKLAGDTAAAADWLLSVSSALSSGQQCLSSLSLMVVHVIITGQDDLCKLALNAGQAIAA
ANPCQVPSLLPVLMFKLGKEKNPDVAHAVLNCLPNLGTHKLCVPMVLQTLHMLASAPKLR
AVAMRLMTALWKKQDRVYPDLQRLLGQQDSRVVVGRDAQWEQILARAACIRDICRERPYQ
HGGDMLAAIKLTLNQCTKPDMETPAALALQGLQELCRAEVVDIVSTWRSLGPELSCDSRP
LMVKATAELLALVPKLIVKSEQYEKLKEEVVSFLWNYAVSKDPDVASCGYKALAEFSEDV
HTINLLPEAARPALKLPDSDEDEQEKNEDEEEKDLSVPGSSYVKLMALTPVSVLPAFELF
LTSLVKQEMSKMPRGVYFSALRGGNLRSDQGKTVAGIPAFMLKTYEKNKQPGLKPGLAAG
LLLCYELPVQTDREGRPIDRFLVSRSRSYQQTLSALIHEVNIQPSEWHRALLLPQAWRGF
MSRAFHAILQGRRADLEMQQKQGKEDPQELQYKQHCAWLWARDQLTDVIKAATKDSPVVQ
GNSILALSGLAAVLAKYESNLPADGDGGLGAGPEFVPTSSWLSILLNTLLSISSSSYKPA
GQVFPWFLHRSYSGENTASAIARSCASLALSLLVPVLVMWQKEALVQVLSALRSSLPGSP
NADDSQAVQFHSGLALGMVLSSLHHQRLSDVSIEKDADLLLSSLEALESCSFNPNLEYNM
GCVLGLALVLSALCSSGHSDQHVHVTQTLEKLLTSLQESGGQGRMLQEVLAYSVACVCVS
AFSGGLIGAEKAEEVMNTLRSLTEESQQTPGFSLALGLVVHGLSVCGHGKAEDIYPRLLA
AWIKILLAEGCPTMQRLAAVNGLVALVGSETYLIQLSNELELSSQQQSRLNEVIRAITQI
ITFSGAIGLQSNSACLVSHLHLAHMSTSHTHTAVPQDFSYLSEKSTIRSIVDFLTEAGKK
GPEFSHPALVKTALTPLASVGSSFQFPPINWSAVLSPLMRLSFGEDVQHQSLVLAANQAQ
SSQSASLFLGSWLSPPLVHSLSFQTRSHLYESLGLWMKHVSEDKLQVYLESLGLQQFQDD
LRPQRLSLCRSVLKGLCQAMALPNPPNNCWSILTSSTEKIFNILPNHITDDEVDLYVGIT
KCLSEMSDTEIDRICRVTETQMEKSCFVLAYLTSQGRVPLLSLNDVIAGVLRGWSSCRLG
WLLLQTFYQCRLAANANTGVLKRMEWLLELMGHIRNVTYGATAVKCGDTKLATDFLFQVF
SAAIVSWADHFMPLLLGVRDKWFPWQPGSKPQTLQHSLYGSESLTELVLPQCMLGLSHSL
PVLLDKEPWSSQMTKFIDWLLSITEGPEQNLSASTINTAKASLLALKSSAEFKKKAVWTR
AYGW
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atggcggagagtttgaagaatcggtttgatttccacagtcctgtcatacaggctcagacg
gtgaggtctctggttgctgctgtgctcaaagaaaaaggaccaaatggacaaatcacacag
tcctccacacagggtccggcattggaggctctgtggcagcagtgttgctctgactctgcc
ctggtgcggtcgtcctgctgtgacgccgtagtgctgctggtggatcagggacacgctgat
ctgcagtatgtcctcaacagcgtcctcaacctcctgccgtccgccagaaacgtcccgggg
ctggtgaaggtgatgggacggctgctgcagatgcaggcagaccagagagacagaggagcc
cccttcatctgtccgtactccatcaggaacagccctcacccgttcatcacagcggtggag
aaccgagcggactgctggccggctctgcttctggtgattgatgatttcattcagcgggct
gctgacaggaacgaaccggcctacgtcaccatgttggctcctttcctgaggtatctgtac
tgtgaacctcagagacagcctcagcacgccctcctcagacacagtctccttagggtgctc
ctgcccaaacccccaggatcagcccctgagaaccagaaccaggactcctctgtgtctgac
agcctgctgctctgcctatgtcagctggtgccacacatgcaggtggacagtgtggagtca
atgttggagctctgtggattcatcgatgctctccttcagcgtctcctttcatcctctcag
gagcgctggcagtctgagggggtcactcttcttctgcagctgctctgtgcctgtcagctc
tgcctgaagctgaacggagactgtcggcatctcctcagctcgattcatcagctaatatct
gcctgccaacaggagctgccattggatgagctgctgatgggcgtggctttgctcctgttg
gaggctcctccagctcagcagagtagtcttctcagtctggctctgagtctaatcccagag
gagtcagagcagtgtccctggttgagtccggtcctggttctccccatcctgcagctactc
tcttgcttgagcctcactgaagctctcgctgatcgacggatccacaacctcaaccaggag
ctggggcacaagctgcttcagagagttagtagggagacggagaaacctggacagtcttcc
ccatcgttgccctttcctctcacctcctggttcagcgagctcagtttggctgtgtctgtg
ctacgtaaactggcaggagatacagcggctgcagctgattggctgttgtctgtcagctct
gccttgtcatctggtcagcagtgtctctcctccctcagtcttatggtggttcacgtcatc
atcacgggtcaggatgacctctgcaagctggctctgaatgccggccaggccatcgctgct
gccaacccctgtcaggttccctcccttcttcctgtcctgatgttcaaactgggaaaagag
aaaaacccagatgtggctcacgctgtgctgaactgtctgccaaaccttgggacgcataag
ctctgtgtccccatggtgctgcagaccctccacatgcttgccagcgcccccaagctgaga
gcagtggcaatgcgcctcatgactgctctatggaagaaacaggatcgagtttacccagac
ctgcagcgtctgctgggccagcaggacagtcgggtggtggtggggagggacgctcagtgg
gagcagatcctggccagagccgcctgcatcagagacatctgcagagagaggccataccag
catggtggagacatgctagcagccattaaactcaccctgaaccagtgcaccaaaccagac
atggaaaccccggccgctctggctctgcagggacttcaggagctgtgcagggccgaggtg
gtggacatcgtctccacgtggaggagtcttggtccggagctgagctgtgactctcgtcct
ctgatggtcaaagccactgccgagcttctggctctggttcctaaactcattgttaagtca
gagcagtatgagaaactaaaggaggaggtggtcagctttctctggaactatgctgtaagc
aaggatccagatgtggccagctgtgggtacaaagctttggctgagttttctgaagacgtc
cacaccataaatctccttcctgaggcggccagaccagctttaaagctccctgacagtgat
gaggatgaacaagagaaaaatgaagacgaggaagagaaggatctttctgttccaggctca
tcatatgtgaagctgatggctctgactcctgtgtctgttctaccagcctttgagctcttc
ctcacttcgctggtgaagcaggagatgagtaagatgcctcggggggtttatttctctgct
ctgagggggggaaacctgcgctctgatcaggggaaaacagtggcggggatcccagccttc
atgctgaaaacctatgagaagaacaaacagccggggctgaagccgggactggcagctggg
ctgctgctctgttatgaactccctgtgcagacggatcgtgaaggcagacccatcgatcgt
ttcctcgtcagccggagtcgcagctaccagcagacgctgtcagctctgattcatgaggtg
aacatccagccatctgagtggcaccgcgccctcctcctgcctcaggcctggagagggttc
atgagccgagcttttcacgccatcctgcagggtcgtcgtgcagatttggagatgcagcag
aaacaaggaaaagaggatccacaggagcttcagtacaaacagcactgtgcctggctgtgg
gccagagatcagctgacagacgtcatcaaagctgctacaaaagacagtcctgtcgttcag
ggaaactccatcctggctctgagcggcctcgctgccgtcctcgctaaatatgagagcaac
cttcccgctgatggagacggaggcctcggggctggaccagagtttgtccccacatccagc
tggttgtccatcctcctcaacactctgctcagcatcagcagcagcagctacaaaccagca
ggacaggttttcccatggtttctacaccgctcatactctggtgagaacacggcgagtgcc
atcgctcgctcctgtgccagccttgccttatccctgctcgtcccagtcctggtgatgtgg
cagaaggaagccttagtccaggtcctgtcagcgctgaggtccagtctgccgggctctcca
aacgctgatgactcccaggctgtccagttccactcaggccttgctctcggcatggtgctg
tccagtctgcaccaccagcgcctcagtgacgtctccattgagaaggacgctgatctcctt
ctcagctctctggaagctttggaaagctgctccttcaacccaaacctggagtacaatatg
ggctgtgtactgggtctggctctagtcctctcagctctctgcagcagcggacacagcgac
caacatgtccacgtcacacaaacactggagaaacttctgaccagcctgcaggaaagtggc
gggcagggccgcatgctgcaggaggttttggcatactctgtggcctgtgtctgtgtctca
gccttcagtggcggtctcatcggcgctgaaaaggcagaggaggtcatgaacaccttgcgc
tctctaactgaggagagccagcagactcctggtttctctctggctctgggtttggttgtc
cacggcctctctgtgtgtggtcatggtaaagctgaagacatctatcctcgtctgctcgct
gcctggatcaagatcttactggcagagggctgtcctacaatgcagcgtctggctgctgtg
aacggtctggtagctttagtcgggtcagagacttaccttatccagctgtccaatgagttg
gagctttcctctcagcagcagagcagactcaacgaggtgattcgagccatcacccagatc
ataacattctcaggagccatcggtctgcagtctaacagcgcctgtttggtgtctcactta
catttagctcacatgtccaccagccacactcacaccgcagttccccaggatttcagttac
ctctctgagaaaagtaccatcaggtccatcgttgatttcctcacagaagcaggaaaaaaa
ggtcctgagttttctcatcctgctcttgtaaaaacggccctgactcctctggcatctgtt
ggatccagtttccagttccctccgatcaactggagcgccgtcctttctcctctgatgaga
ctcagctttggagaggacgtccagcatcagagtctggttctagcagccaatcaggctcag
tcgtctcagagtgcctctttgttcctgggctcctggctttcacctccgctggtgcacagc
ctcagtttccagactcgttcccacctctatgagtctctgggtctgtggatgaagcatgtc
tctgaggataaactgcaggtctacctggagagtctgggtctgcagcagttccaggacgac
cttcgacctcagcgtttgtctctgtgtcgctccgtgctgaagggtctgtgtcaggccatg
gccctgccaaacccccccaacaactgctggagcatcctgacctccagcactgagaagatc
ttcaacatcctgccaaaccacatcacggatgatgaggtggatttatatgttgggatcacc
aaatgtctgtctgagatgtctgatacagagattgatcgaatctgtcgagtcacagagact
cagatggagaagtcctgcttcgtcctggcgtatttgacttcccaggggagggtccccctt
ctcagtctcaatgatgtcatcgcaggtgtgcttcgtggttggtcaagctgcagattgggc
tggctcctcctgcagacgttttaccagtgtcgcctggcagccaacgctaacacaggcgtt
cttaaacggatggagtggctgctggagctgatgggacacatcagaaacgtcacttatgga
gcaaccgccgtcaagtgtggagacaccaaactggccacagacttcctgtttcaggtcttt
tctgctgccatcgtctcctgggccgaccacttcatgcccctcctcctcggcgtcagagac
aagtggttcccatggcaaccaggatccaagccccaaactctgcagcacagtctgtatggc
agtgagtcgctcactgagcttgtcctgccccagtgcatgctgggattgtcccacagtctg
cctgtgctactggacaaagagccatggagcagccagatgaccaagttcattgattggctc
ctgagcatcactgaaggtcctgaacagaatctgtctgcctcaaccatcaacaccgctaaa
gcctctctgttggccctgaagtcctccgctgagtttaagaagaaggccgtgtggaccaga
gcatacggatggtag
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integrated database retrieval system