Cheilinus undulatus (humphead wrasse): 121505434
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Entry
121505434 CDS
T07473
Symbol
upf2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121505434 (upf2)
03015 mRNA surveillance pathway
121505434 (upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121505434 (upf2)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121505434 (upf2)
mRNA cycle factors
P-body specific factors
121505434 (upf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
pPIWI_RE_Y
Motif
Other DBs
NCBI-GeneID:
121505434
NCBI-ProteinID:
XP_041636705
LinkDB
All DBs
Position
23:complement(33201864..33230677)
Genome browser
AA seq
1289 aa
AA seq
DB search
MTDVCYAISSSMPAERKRSVNMDDKEVCTFSNKDKDKDRDGDRRPGSARDKAKDEAKMSS
KKDGGKEEKRKRLEEEKKKKEEKDRRKKEEEKQKAEEEMKKKEEEEKKQQEEQEKKLQEE
EAKRQREEEAALLKEKEEGHQLHQEAWERHQCRKDLRGKNQNAQEGRPEEAFFSRLDSSL
KKNTAFVKKLRTLTEQQRDSLSNDFNSLNLSKYIGEAVSSVVEAKLKISDVGCAVHLCSL
FHQRYAEFAPLLLQAWKKHFEARKEDKAPNVSKLRTDLRFIAELTIVGLFTDKEGLSLIY
EQLKNIIGTDRETHTHVSVVISFCKHCGDDIAGLVPRKVKLAAEKFGLAFPPSEIISTEK
QQPFQNLLREYFTSLTKHLKKDHRELQNTERQNRRILHSKGELSEDRHKQYEEFATSYQK
LLANTQSLADLLDENMPELPQDKTVQEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFY
ENLVDLKAFVPAILFKDNEKSSQGREKDDGKDGREGKDSASTTEELELELEALDITDEPL
ELEGPDEAENEELAKKLLDEQEQEDEEANTGSHLKLIVDAFIQQLPNCVNRDLIDKAAMD
FCMNMNTKSNRRKLVRALFTVPRQRLDLLPFYSRLVATLHPCMSDVAEDLCSMLKGDFRF
HIRKKDQINIETKNKTVRFIGELAKFKMFSKTDTLHCLKMLLSDFTHHHIEMACTLLETC
GRFLFRSPDSHLRTSVLLEQMMRKKQAQHLDARYITMVENAYYYCNPPPVEKTVKKKRPP
LQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDPEVKSFLICCMVNIWNVKYNSIHCVANL
LAGLVAYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELYNYRMVESAVIF
RTLFSFISFGINQDGSPSLLDPPEHLFRIRLVCTLLDTCGQYFDRGSSKRKLDCFLIYFQ
RYIWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKMRLSCSLEEATKQVTELEREVLVK
LGLAMEKDGRSSAMSEGEGLDEEDDDGDDDEEGGAETEEQSGNESEMNEQEEDEGSENEE
EEREEEEEENTDYLTDSNKENETDEENNEVTIRGGGLKHVACAEDEDFIQALDKMMLENL
QQRSGETVKVHQLDVAIPLQLKSQLKKGGSGQPCLGETEADISDTMQFVMLTRKGNKQQY
KILNVPLSSHLAANHFNQQQAEQEERMRMKKLTLDINERQEQEDYQEMMQSLAQRPAPAN
TNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgtttgttatgctatcagtagcagcatgcctgctgaacgcaagcgatcagta
aacatggacgacaaagaagtgtgcaccttcagcaacaaggacaaagataaggaccgagac
ggcgacagaagaccgggatctgctcgagacaaagcaaaagacgaagccaaaatgagcagc
aagaaagacggcggcaaagaggagaagagaaagcgcctagaggaggaaaagaagaagaag
gaggaaaaggatcgtagaaagaaggaggaggagaaacagaaggcagaggaggagatgaag
aagaaagaggaggaggagaagaaacagcaggaggagcaggagaagaagcttcaggaggag
gaggccaaacgacagcgtgaggaggaagctgctctccttaaggagaaggaggagggccat
cagctgcaccaggaggcctgggagcgccaccagtgcaggaaggatctccgcggtaagaac
cagaatgcccaggagggtcgtcctgaagaggctttcttcagccgcctggactccagtctg
aaaaagaacactgcttttgtgaagaagctgcgtacactcactgagcagcagcgagactcg
ctctccaatgactttaactctctgaacctcagcaagtacatcggcgaggctgtgagctct
gtcgtagaggccaagctgaagatctctgacgttggctgtgccgttcacctctgttccctc
ttccaccagcgctacgccgagttcgctccgttactgttacaggcctggaagaagcacttt
gaggcccggaaggaggacaaggcaccgaacgtgagcaagctgcgcacagacctgcgattt
atcgccgagctcaccatcgtcggcctcttcacggacaaagaaggactctctctcatttat
gagcagctgaagaacatcatcgggaccgaccgtgagacgcacacgcacgtgtcggtggtg
atcagcttctgtaagcactgcggggacgacatcgccggtctggtcccacgtaaggtgaag
ctggctgctgagaagttcggcttggcctttcctccaagtgagattatcagcacagagaag
cagcagcccttccagaaccttctgagggagtacttcacttcactcaccaaacacctgaaa
aaggaccacagggagctgcagaacaccgagaggcagaacaggcgtatccttcactccaaa
ggagaactgagcgaggaccgacacaagcagtacgaagagtttgccacctcctaccagaag
ctgctggctaacacgcagtccctcgctgatctgctggatgagaacatgccggagctgccg
caggacaagaccgtgcaggaagagcacggccccggcattgacattttcactcctggtaag
cctggagaatacgacctggagggaggaatctgggaggatgaagacgctcgtaacttctat
gagaacctggtggacctaaaggccttcgttcccgcaatcctcttcaaggacaacgagaag
agcagccagggcagagagaaggacgatggcaaagatggcagagaaggcaaggactcagcc
agcaccacagaggagctggagttagagctggaggctttggacatcacagatgaacctctg
gagctggagggaccagacgaggcagaaaacgaggagctggctaaaaaactgctggatgag
caagaacaagaggatgaagaggccaacacagggtcccacttgaagctcattgtagatgcc
ttcatccagcagctccctaactgtgtcaacagagatctcatagataaggctgccatggac
ttctgcatgaacatgaacaccaaatccaacaggaggaaactcgtccgagctctcttcacc
gtccccagacagaggttggaccttctgcccttctactctcgcctggtggcaactctccat
ccatgcatgtctgacgtggctgaagacctgtgctccatgctgaagggagacttcaggttt
cacattcgtaagaaggaccagatcaacatcgagacaaaaaataaaacggtccggttcatc
ggggagttggccaagttcaaaatgttctcgaagacggacacgcttcactgtctcaagatg
ctgctgtcagattttacccatcatcacatcgagatggcgtgcacgctgctggaaacctgc
ggccgcttcctcttcagatctccagactcccacctgcgtaccagtgtcctactggagcaa
atgatgcgtaagaagcaggcgcagcacctcgatgctcgctacatcaccatggtggaaaac
gcctactactactgcaaccctccacctgtggagaaaacggtgaagaagaagaggccgccg
ctgcaggagtacatccgtaagctgctctacaaagacctgtccaaggtgaccacggagaag
gtgctgaggcagatgaggaagctgccgtggcaggaccccgaggtgaagagcttcctcatc
tgctgcatggtcaacatctggaacgtcaagtacaacagcatccactgcgtcgccaacctg
ctggccggtctggtcgcctaccaggaggatgtggggatccacgtggtggacggcgtgcta
gaggacatcagactgggcatggaggtcaaccagccgaagttcaaccagcggcgcatcagc
agcgccaagttcctcggcgagctttataactaccgcatggtggagtccgccgtcatcttc
cgcactctcttctccttcatctcctttgggatcaatcaggacggcagcccgagcctcctc
gaccctcctgagcacctgttccgcatccgcctggtctgcacgctgctcgacacgtgcgga
cagtacttcgaccgcggctccagcaagaggaaactcgactgtttcctcatctacttccag
cggtacatctggtggaagaagagcctggacgtctggaccaaagaccacccgttccccatc
gacatcgattacatgatcagtgacaccctggagctgctgcggcccaagatgaggctgagc
tgctccctggaggaggccaccaaacaggtcacagagctggagagggaggtgctcgtcaaa
ctgggtctggcaatggaaaaagatggccgctccagcgccatgagcgaaggcgagggtctt
gacgaagaagacgatgatggcgatgatgatgaagagggcggcgcagagacggaggagcag
tcgggcaacgagagcgaaatgaacgaacaggaagaggatgagggatctgagaatgaggag
gaggagagggaggaagaagaggaggagaacaccgactacctgactgactccaacaaagag
aatgagacagacgaggagaacaatgaggtcaccatcaggggaggaggactgaagcatgta
gcttgtgctgaggacgaggatttcattcaggctctagataagatgatgctggagaacctg
cagcagcgcagcggcgagacggtgaaggtgcaccagctggacgtggcgatcccgctgcag
ctgaaaagccaactgaagaaggggggctccggacagccgtgcctcggggaaacagaagca
gacatctctgacaccatgcagtttgtgatgctgacacgtaaaggaaacaaacagcagtat
aagatcctgaacgtgccgctgtcgtcccacctggcggcgaatcacttcaaccagcagcag
gctgagcaggaggagcgcatgaggatgaagaagctgaccctggacatcaacgagaggcag
gagcaggaggactaccaggagatgatgcagtccctggcgcagcgtcccgctccggccaac
acaaaccgagagcgccggcctcgctaccagcacccgaaaggcgctcccaatgccgacctc
atcttcaagaccggaggaaggagacgctga
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