KEGG   Cheilinus undulatus (humphead wrasse): 121506711
Entry
121506711         CDS       T07473                                 
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like
  KO
K11757  protein polybromo-1
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    121506711 (pbrm1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cud03021]
    121506711 (pbrm1l)
   03036 Chromosome and associated proteins [BR:cud03036]
    121506711 (pbrm1l)
Transcription machinery [BR:cud03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     121506711 (pbrm1l)
Chromosome and associated proteins [BR:cud03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    121506711 (pbrm1l)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1 eIF-1a
Other DBs
NCBI-GeneID: 121506711
NCBI-ProteinID: XP_041638497
LinkDB
Position
3:32888042..32902841
AA seq 1642 aa
MSANSKRRRATSPSSSISGGGDLDDASSTPGSGRKRRRISNVPPVDTIAVCHELFNAVRD
HKDEQGRQPSEFFLRVPKRRNLPDYYEVVSQPIDMSKIQHKLKSEDYNDVEQLTADFQLM
FNNAKSFYKRDSEEFQAACKLWEVYLQTRTEFVQPGDGDDDDEDGDDMMDTPGMSTEDET
STSSLKEVLEQLLEAVVSHTDPSGRLVSELFQKLPSKVHYPDYYAIIKEPIDLRTIAQRI
QIGHYKSVIAMAKDIDLMAKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSSL
RIRNRRSGQGDRLSGVSVALHYGSESEDDPVLLGSVCYDEGESEAESQSSSMEMSNPIFQ
LYEAVRGARNNQGQVFSEPFQQLPSRREYPDYYQQIKQPIALQQIRAKMKNGEYESVEQI
EADLNVMFENAKRYNMPNSSIYKRAFRLQQILQAKKRELLRRDDEDGDSILSSDAGSIKR
KSHKKNVKKNRMKALYAAVTEAREASTARRLCDLFMVKPSKKDYPDYYKVILEPMDLKTI
EHNIRNERYSTEDSLMEDMKLMFRNARHYNEEGSQVYNDADILEKILQDKRNELGPPPEE
DDVGSPKLKLRKSGVSPKKSKYLTPLQQRLNELYDAVRNFTDRRGRRLSTIFLRLPSRSE
LPDYYATIKKPIDMERVRSHMAAGRYQDVEALVEDFALMFNNACMYNEPESLIYRDALVL
HRVLLETRKQQEGGEDSGPPAVGPLVRELIRNLFVSVLGHQDEEGRCYSDSLAEIPAVDP
AAPEKPPLNFDVIRMNVDRGRYRRLDVFQEHMFEVLEKARRLHRTDSEVFEDAVELQQFF
IKIRDELCKNGEILLSAALNYTIKHLHNDVEQEKREKIPKEIEEDRKKEEEEKEDKESEK
AEDQQGESWQPESETERVYSQDCSFENRTYHVGEFVYVEPSEPNLKPHIVCIERLWEEEA
GGKWLYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVSISKVLGKCVVMFVKDYFKMQP
EGYRAEDVYICESRYTARTKSFKKIKIWAMPPSPVKIVPRDVPLPVVRVASMFAKPDMDK
TTISYSDSGSYVDKEREDVPMEMSGAELDCQYYEQMRFNNIWVKVGDCVYIQSHGLSKPR
VARIEKLWVQNGAAFFFGPIFIHPEETEHEPTKMFYKREVFMSHLEETLPITCVIGKCMV
SSFKDFLSCRPTEVSEDDILLCESRYIDTEKQMKKFKGLKRFSYSSKVVEDEIYYFRKLI
VPQKEASPFLDKKIDELELKLADLEDADDDMEDMDDEEEAPATPSMPQMQTPHPSDMDIM
PYTPSQSTPRVKGLSKKEGAKRKMNMSGYILFSSEMRAVIKARHPDYSFGELSRLVGTEW
RNLEASKKAEYEERAAKIVEQQDRERPPQKQASPRAGTPIGALMGVVPSPSTMGMINQSM
TPVSGMMGAYGPPYMPMQGPHEGLLSVAPMPPHPAGGPYLPPHHLQQGMPGYPGMPHQGM
MGPGMNGMAGSPAQGNYMQQPGMFSPGPHAPPPYPGQGQPSHLQPTSPMFVAPPPKTQRV
LHSEAYLKYIEGLNSESSTVSKWDQTLRAQRRDAHLTKEQESRLPAHWLKSKGAHTTMAD
ALWRLRDLMLRDSLNICQAHNL
NT seq 4929 nt   +upstreamnt  +downstreamnt
atgtcggcaaactcaaagaggagaagagccacttcaccctccagcagcatcagcggagga
ggagacctcgatgatgcctcctctactcctggaagtggcagaaaaagaagaagaatctcc
aatgtacctcctgtggatacgattgctgtatgccatgagctgttcaacgctgtcagggat
cacaaggatgagcaaggaaggcaacccagtgaatttttcttgagggtaccaaagagaagg
aatcttcctgactattatgaagtggtttcccagccaattgatatgtcaaaaattcagcac
aaactgaagtcagaggattacaatgatgtggagcaactaactgcagatttccagctcatg
ttcaacaatgccaaatcattctacaagagagacagtgaggagttccaagctgcatgcaag
ctgtgggaggtttatttgcaaacgaggacggagtttgttcaacctggagatggagatgat
gatgatgaagacggtgatgacatgatggatactccaggaatgtcaactgaagatgagacc
tcaactagcagtttgaaagaggtgttggagcaactcttagaggctgtggtgtcacacact
gatccctcagggcgtctggtcagtgaactgttccagaaactgccttccaaagtgcattac
ccagactactatgccattatcaaggagccaatagatctaaggacaattgctcagcggata
cagattggacactataaaagtgtcattgctatggctaaggatattgacttgatggccaaa
aatgccaaaacatacaacgaaccaggatctcaggttttcaaggatgctaataccataaag
aaagtcttcatccagcggaagactgaacttgaacatgctgaacccactaagtctagtctt
cgcatcaggaatcgcaggtcaggccagggggatcggctctcaggcgtcagtgttgctctt
cactacggctcggaaagcgaggacgatcctgtgctcttaggctccgtgtgctacgatgag
ggtgagtcagaggcagagagccagagctccagtatggagatgagtaacccgatcttccag
ctgtatgaagctgtgaggggggctaggaacaaccaggggcaggttttttctgaacctttt
cagcagcttccctctcgcagggaatatcctgactattatcaacagatcaaacagccgatc
gccctgcagcagatcagggctaagatgaagaatggcgagtatgaaagtgtggaacagata
gaggctgacctcaatgtgatgtttgagaatgcaaagcgctacaacatgcctaactcaagt
atttacaaacgggcctttaggcttcagcagatcttacaggccaaaaagagggagcttctg
aggagggatgatgaggatggagatagcattctgtcatctgatgcaggaagcatcaaaaga
aaaagccacaagaaaaatgtgaaaaagaacagaatgaaagccttatatgctgcagtgacc
gaggccagggaggctagcaccgctcgccgactttgtgatctcttcatggtcaaaccttct
aaaaaagactaccctgactactacaaagtcatccttgaaccaatggacctaaagaccatc
gagcacaacattcgcaatgagcgctacagcactgaggattccctcatggaggatatgaag
ttgatgttccgcaatgcccggcattacaatgaggagggatctcaggtatataacgatgct
gatattctggagaagatacttcaggacaagcgcaatgagctgggaccgccacctgaggaa
gatgatgttggatctccaaaactgaaattgagaaaaagtggtgtttctccaaagaagtcc
aagtacctcacccctctccagcagaggttaaatgagctctatgatgctgtgcgaaacttc
actgaccgcagaggccgacgattgagcacaatcttcctccgcctgccgtctcgctccgag
ctgcctgattattatgccactataaagaagcccatcgatatggagcgtgtgcgaagccac
atggcagctggtcgttaccaagatgtcgaagctctggtggaggactttgccctcatgttc
aacaatgcttgcatgtacaacgagcccgagtctctcatctaccgggatgcactggtgttg
caccgcgtgctgttggagacccgtaagcagcaggagggaggagaggactcggggcctcct
gctgtgggacctctggtacgagagctgatcaggaacctgtttgtgtccgtgctgggtcac
caggacgaagagggccgatgctatagtgactcgctggctgagattcctgctgttgatcca
gctgctcctgagaaaccaccgcttaactttgatgtcatcaggatgaacgttgaccgcgga
cgttataggagactggacgtcttccaggaacacatgttcgaagtgcttgagaaggcacgg
aggctacacaggactgactctgaggtatttgaagatgctgtggagctgcagcaatttttc
attaagataagggatgagctgtgcaagaatggggaaattctgctctccgccgctctcaac
tacacgataaaacacctgcacaatgatgtggagcaagaaaagagggagaaaattccaaag
gagattgaggaggaccgaaagaaggaggaggaggagaaggaggacaaagagagtgagaaa
gcagaggatcagcaaggagagtcatggcaaccagagtcggagacagagcgtgtgtacagt
caggactgtagctttgaaaaccgcacctaccatgtgggggagtttgtctatgtggagcca
tcggagcccaatctgaagccacacattgtctgcatcgagcgactgtgggaggaggaagca
ggtgggaagtggctctatggctgctggttctacagaccgagtgaaaccttccacctggca
acacgcaagttcctggaaaaggaggtttttaagagcgattactataacaaagtgtccatc
agtaaagttctgggcaagtgtgtggtaatgtttgtgaaggattatttcaaaatgcagcct
gaaggctacagagctgaggacgtgtatatatgtgaatctcgctacactgctcggaccaag
tcctttaagaagatcaagatttgggccatgcctccaagccctgtgaaaatagtccctcga
gatgtgccactacctgttgttcgtgttgcttccatgtttgccaagcctgacatggacaaa
acaacaatttcttactcggacagcggcagttatgtggataaggagagagaggatgtgccc
atggagatgagtggagccgagctcgactgccagtattatgaacagatgcgcttcaacaac
atctgggtcaaagttggagactgtgtttacatccagtctcatggtctatccaaaccaaga
gttgccaggatcgagaagctgtgggtgcagaatggagctgctttcttctttggaccgata
tttatccatcctgaggaaacagagcatgaacccacgaagatgttctacaaaagagaagtg
tttatgagccatctggaggagactttacccatcacctgtgtcataggcaaatgcatggtg
tcatcttttaaagacttcctgtcatgcagacctactgaggtttcagaagatgacatcctg
ctgtgcgagagccgctacattgacacagagaagcagatgaaaaagttcaagggtttgaag
cgcttctcctactcctccaaagtagtggaggatgagatctactatttcagaaaattgata
gtgccacagaaggaagcatcgccctttttggacaagaaaattgatgaactcgagttaaaa
ctggcagatttggaggatgctgatgatgatatggaagacatggacgatgaggaggaggct
ccagcaacaccttctatgcctcagatgcagacccctcatccaagcgatatggatatcatg
ccatatacaccttctcagtccactcctcgggtgaagggcttatcaaagaaggaaggagcc
aagaggaagatgaacatgagcggctacatcttattcagcagtgaaatgcgagcagtcatc
aaagctcgacacccagactactcctttggggaactgagtcgtctcgtgggcacagagtgg
aggaaccttgaggcctcaaagaaagcagagtatgaagagcgtgcagccaaaatcgtggag
caacaagatcgtgagagaccaccccagaagcaagcatcccctagagcaggtacccccata
ggggcactgatgggggtggtgccttcgcctagcactatgggaatgataaaccagtccatg
acacctgtgtcaggcatgatgggagcttacggcccaccttatatgcccatgcagggcccc
catgagggcttgctgagtgtggccccaatgccacctcaccctgcaggtgggccctacctg
cctcctcaccatctccagcaaggtatgcctgggtaccctggcatgcctcatcagggtatg
atgggtcctgggatgaatggcatggcaggaagtcctgcacaagggaactatatgcaacag
cctgggatgttcagcccaggaccacatgctcctccaccttatcctggacagggacagcca
tcacacctgcaacccacctctcccatgtttgtggctccacctccaaagactcagagggtg
ctccactctgaggcctacctgaagtacattgagggtttgaattcagagtccagcactgtc
agcaagtgggaccaaacgctcagagcccagaggcgtgatgctcacctgaccaaagagcag
gagagccggctgccagcacactggctaaagagcaaaggagcccacacaaccatggccgat
gcactgtggcgcctgcgtgacctaatgctgagggactctctgaacatctgtcaagcacac
aacctttaa

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