Cheilinus undulatus (humphead wrasse): 121506711
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Entry
121506711 CDS
T07473
Symbol
pbrm1l
Name
(RefSeq) polybromo 1, like
KO
K11757
protein polybromo-1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121506711 (pbrm1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121506711 (pbrm1l)
03036 Chromosome and associated proteins [BR:
cud03036
]
121506711 (pbrm1l)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121506711 (pbrm1l)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
121506711 (pbrm1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
eIF-1a
Motif
Other DBs
NCBI-GeneID:
121506711
NCBI-ProteinID:
XP_041638497
LinkDB
All DBs
Position
3:32888042..32902841
Genome browser
AA seq
1642 aa
AA seq
DB search
MSANSKRRRATSPSSSISGGGDLDDASSTPGSGRKRRRISNVPPVDTIAVCHELFNAVRD
HKDEQGRQPSEFFLRVPKRRNLPDYYEVVSQPIDMSKIQHKLKSEDYNDVEQLTADFQLM
FNNAKSFYKRDSEEFQAACKLWEVYLQTRTEFVQPGDGDDDDEDGDDMMDTPGMSTEDET
STSSLKEVLEQLLEAVVSHTDPSGRLVSELFQKLPSKVHYPDYYAIIKEPIDLRTIAQRI
QIGHYKSVIAMAKDIDLMAKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSSL
RIRNRRSGQGDRLSGVSVALHYGSESEDDPVLLGSVCYDEGESEAESQSSSMEMSNPIFQ
LYEAVRGARNNQGQVFSEPFQQLPSRREYPDYYQQIKQPIALQQIRAKMKNGEYESVEQI
EADLNVMFENAKRYNMPNSSIYKRAFRLQQILQAKKRELLRRDDEDGDSILSSDAGSIKR
KSHKKNVKKNRMKALYAAVTEAREASTARRLCDLFMVKPSKKDYPDYYKVILEPMDLKTI
EHNIRNERYSTEDSLMEDMKLMFRNARHYNEEGSQVYNDADILEKILQDKRNELGPPPEE
DDVGSPKLKLRKSGVSPKKSKYLTPLQQRLNELYDAVRNFTDRRGRRLSTIFLRLPSRSE
LPDYYATIKKPIDMERVRSHMAAGRYQDVEALVEDFALMFNNACMYNEPESLIYRDALVL
HRVLLETRKQQEGGEDSGPPAVGPLVRELIRNLFVSVLGHQDEEGRCYSDSLAEIPAVDP
AAPEKPPLNFDVIRMNVDRGRYRRLDVFQEHMFEVLEKARRLHRTDSEVFEDAVELQQFF
IKIRDELCKNGEILLSAALNYTIKHLHNDVEQEKREKIPKEIEEDRKKEEEEKEDKESEK
AEDQQGESWQPESETERVYSQDCSFENRTYHVGEFVYVEPSEPNLKPHIVCIERLWEEEA
GGKWLYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVSISKVLGKCVVMFVKDYFKMQP
EGYRAEDVYICESRYTARTKSFKKIKIWAMPPSPVKIVPRDVPLPVVRVASMFAKPDMDK
TTISYSDSGSYVDKEREDVPMEMSGAELDCQYYEQMRFNNIWVKVGDCVYIQSHGLSKPR
VARIEKLWVQNGAAFFFGPIFIHPEETEHEPTKMFYKREVFMSHLEETLPITCVIGKCMV
SSFKDFLSCRPTEVSEDDILLCESRYIDTEKQMKKFKGLKRFSYSSKVVEDEIYYFRKLI
VPQKEASPFLDKKIDELELKLADLEDADDDMEDMDDEEEAPATPSMPQMQTPHPSDMDIM
PYTPSQSTPRVKGLSKKEGAKRKMNMSGYILFSSEMRAVIKARHPDYSFGELSRLVGTEW
RNLEASKKAEYEERAAKIVEQQDRERPPQKQASPRAGTPIGALMGVVPSPSTMGMINQSM
TPVSGMMGAYGPPYMPMQGPHEGLLSVAPMPPHPAGGPYLPPHHLQQGMPGYPGMPHQGM
MGPGMNGMAGSPAQGNYMQQPGMFSPGPHAPPPYPGQGQPSHLQPTSPMFVAPPPKTQRV
LHSEAYLKYIEGLNSESSTVSKWDQTLRAQRRDAHLTKEQESRLPAHWLKSKGAHTTMAD
ALWRLRDLMLRDSLNICQAHNL
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcaaactcaaagaggagaagagccacttcaccctccagcagcatcagcggagga
ggagacctcgatgatgcctcctctactcctggaagtggcagaaaaagaagaagaatctcc
aatgtacctcctgtggatacgattgctgtatgccatgagctgttcaacgctgtcagggat
cacaaggatgagcaaggaaggcaacccagtgaatttttcttgagggtaccaaagagaagg
aatcttcctgactattatgaagtggtttcccagccaattgatatgtcaaaaattcagcac
aaactgaagtcagaggattacaatgatgtggagcaactaactgcagatttccagctcatg
ttcaacaatgccaaatcattctacaagagagacagtgaggagttccaagctgcatgcaag
ctgtgggaggtttatttgcaaacgaggacggagtttgttcaacctggagatggagatgat
gatgatgaagacggtgatgacatgatggatactccaggaatgtcaactgaagatgagacc
tcaactagcagtttgaaagaggtgttggagcaactcttagaggctgtggtgtcacacact
gatccctcagggcgtctggtcagtgaactgttccagaaactgccttccaaagtgcattac
ccagactactatgccattatcaaggagccaatagatctaaggacaattgctcagcggata
cagattggacactataaaagtgtcattgctatggctaaggatattgacttgatggccaaa
aatgccaaaacatacaacgaaccaggatctcaggttttcaaggatgctaataccataaag
aaagtcttcatccagcggaagactgaacttgaacatgctgaacccactaagtctagtctt
cgcatcaggaatcgcaggtcaggccagggggatcggctctcaggcgtcagtgttgctctt
cactacggctcggaaagcgaggacgatcctgtgctcttaggctccgtgtgctacgatgag
ggtgagtcagaggcagagagccagagctccagtatggagatgagtaacccgatcttccag
ctgtatgaagctgtgaggggggctaggaacaaccaggggcaggttttttctgaacctttt
cagcagcttccctctcgcagggaatatcctgactattatcaacagatcaaacagccgatc
gccctgcagcagatcagggctaagatgaagaatggcgagtatgaaagtgtggaacagata
gaggctgacctcaatgtgatgtttgagaatgcaaagcgctacaacatgcctaactcaagt
atttacaaacgggcctttaggcttcagcagatcttacaggccaaaaagagggagcttctg
aggagggatgatgaggatggagatagcattctgtcatctgatgcaggaagcatcaaaaga
aaaagccacaagaaaaatgtgaaaaagaacagaatgaaagccttatatgctgcagtgacc
gaggccagggaggctagcaccgctcgccgactttgtgatctcttcatggtcaaaccttct
aaaaaagactaccctgactactacaaagtcatccttgaaccaatggacctaaagaccatc
gagcacaacattcgcaatgagcgctacagcactgaggattccctcatggaggatatgaag
ttgatgttccgcaatgcccggcattacaatgaggagggatctcaggtatataacgatgct
gatattctggagaagatacttcaggacaagcgcaatgagctgggaccgccacctgaggaa
gatgatgttggatctccaaaactgaaattgagaaaaagtggtgtttctccaaagaagtcc
aagtacctcacccctctccagcagaggttaaatgagctctatgatgctgtgcgaaacttc
actgaccgcagaggccgacgattgagcacaatcttcctccgcctgccgtctcgctccgag
ctgcctgattattatgccactataaagaagcccatcgatatggagcgtgtgcgaagccac
atggcagctggtcgttaccaagatgtcgaagctctggtggaggactttgccctcatgttc
aacaatgcttgcatgtacaacgagcccgagtctctcatctaccgggatgcactggtgttg
caccgcgtgctgttggagacccgtaagcagcaggagggaggagaggactcggggcctcct
gctgtgggacctctggtacgagagctgatcaggaacctgtttgtgtccgtgctgggtcac
caggacgaagagggccgatgctatagtgactcgctggctgagattcctgctgttgatcca
gctgctcctgagaaaccaccgcttaactttgatgtcatcaggatgaacgttgaccgcgga
cgttataggagactggacgtcttccaggaacacatgttcgaagtgcttgagaaggcacgg
aggctacacaggactgactctgaggtatttgaagatgctgtggagctgcagcaatttttc
attaagataagggatgagctgtgcaagaatggggaaattctgctctccgccgctctcaac
tacacgataaaacacctgcacaatgatgtggagcaagaaaagagggagaaaattccaaag
gagattgaggaggaccgaaagaaggaggaggaggagaaggaggacaaagagagtgagaaa
gcagaggatcagcaaggagagtcatggcaaccagagtcggagacagagcgtgtgtacagt
caggactgtagctttgaaaaccgcacctaccatgtgggggagtttgtctatgtggagcca
tcggagcccaatctgaagccacacattgtctgcatcgagcgactgtgggaggaggaagca
ggtgggaagtggctctatggctgctggttctacagaccgagtgaaaccttccacctggca
acacgcaagttcctggaaaaggaggtttttaagagcgattactataacaaagtgtccatc
agtaaagttctgggcaagtgtgtggtaatgtttgtgaaggattatttcaaaatgcagcct
gaaggctacagagctgaggacgtgtatatatgtgaatctcgctacactgctcggaccaag
tcctttaagaagatcaagatttgggccatgcctccaagccctgtgaaaatagtccctcga
gatgtgccactacctgttgttcgtgttgcttccatgtttgccaagcctgacatggacaaa
acaacaatttcttactcggacagcggcagttatgtggataaggagagagaggatgtgccc
atggagatgagtggagccgagctcgactgccagtattatgaacagatgcgcttcaacaac
atctgggtcaaagttggagactgtgtttacatccagtctcatggtctatccaaaccaaga
gttgccaggatcgagaagctgtgggtgcagaatggagctgctttcttctttggaccgata
tttatccatcctgaggaaacagagcatgaacccacgaagatgttctacaaaagagaagtg
tttatgagccatctggaggagactttacccatcacctgtgtcataggcaaatgcatggtg
tcatcttttaaagacttcctgtcatgcagacctactgaggtttcagaagatgacatcctg
ctgtgcgagagccgctacattgacacagagaagcagatgaaaaagttcaagggtttgaag
cgcttctcctactcctccaaagtagtggaggatgagatctactatttcagaaaattgata
gtgccacagaaggaagcatcgccctttttggacaagaaaattgatgaactcgagttaaaa
ctggcagatttggaggatgctgatgatgatatggaagacatggacgatgaggaggaggct
ccagcaacaccttctatgcctcagatgcagacccctcatccaagcgatatggatatcatg
ccatatacaccttctcagtccactcctcgggtgaagggcttatcaaagaaggaaggagcc
aagaggaagatgaacatgagcggctacatcttattcagcagtgaaatgcgagcagtcatc
aaagctcgacacccagactactcctttggggaactgagtcgtctcgtgggcacagagtgg
aggaaccttgaggcctcaaagaaagcagagtatgaagagcgtgcagccaaaatcgtggag
caacaagatcgtgagagaccaccccagaagcaagcatcccctagagcaggtacccccata
ggggcactgatgggggtggtgccttcgcctagcactatgggaatgataaaccagtccatg
acacctgtgtcaggcatgatgggagcttacggcccaccttatatgcccatgcagggcccc
catgagggcttgctgagtgtggccccaatgccacctcaccctgcaggtgggccctacctg
cctcctcaccatctccagcaaggtatgcctgggtaccctggcatgcctcatcagggtatg
atgggtcctgggatgaatggcatggcaggaagtcctgcacaagggaactatatgcaacag
cctgggatgttcagcccaggaccacatgctcctccaccttatcctggacagggacagcca
tcacacctgcaacccacctctcccatgtttgtggctccacctccaaagactcagagggtg
ctccactctgaggcctacctgaagtacattgagggtttgaattcagagtccagcactgtc
agcaagtgggaccaaacgctcagagcccagaggcgtgatgctcacctgaccaaagagcag
gagagccggctgccagcacactggctaaagagcaaaggagcccacacaaccatggccgat
gcactgtggcgcctgcgtgacctaatgctgagggactctctgaacatctgtcaagcacac
aacctttaa
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integrated database retrieval system