Cheilinus undulatus (humphead wrasse): 121507198
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Entry
121507198 CDS
T07473
Symbol
smarcd1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121507198 (smarcd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121507198 (smarcd1)
03036 Chromosome and associated proteins [BR:
cud03036
]
121507198 (smarcd1)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121507198 (smarcd1)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
121507198 (smarcd1)
PBAF complex
121507198 (smarcd1)
GBAF(ncBAF) complex
121507198 (smarcd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
121507198
NCBI-ProteinID:
XP_041639341
LinkDB
All DBs
Position
3:42157362..42180677
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AA seq
514 aa
AA seq
DB search
MAARGGFQSAPTGGGGGAMGPGPPVPGAGPGMGPGTPSGRMGPSAAAQNHMYRSPMPGPG
YPRPGMPPSSRMTPQGPAMGPPGYGNSPVSRPVMPGVMDPSRKRPAPQQIQQVQQQNRNQ
HTKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKRK
LRIFISNTFNPAKPDAEDGEGTVASWELRVEGRLLEDTAVSKYEATKQKRKFSSFFKSLV
IELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVGVRCTVLLMLDYQPPQFKLDPRL
ARMLGIHTQTRPVIIQALWQYVKTHKLQDPHEREFINCDKYLQQIFETQRMKFSEIPQRL
HALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAGLD
NKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAEF
YYQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcggccagaggggggtttcaatcggcacctacgggaggtggtggcggagcaatggga
cctggaccaccggtaccgggagcgggaccaggcatgggccccgggactccttctggcagg
atgggaccgtcggcggcggcgcagaatcacatgtaccgctccccgatgccagggcctgga
tacccgagaccaggcatgcctccatccagccgaatgacacctcagggacctgccatgggc
cctccggggtatggcaacagtccagtatctcgcccggtgatgcctggcgtgatggacccg
tctcgaaagaggcctgccccccaacagattcagcaggtgcagcagcagaaccgcaaccag
catacaaagaagaagaagatggctgataaaattctacctcagaggatcagggaactggtc
ccagagtctcaggcttacatggatctgctggctttcgagaggaagctcgaccagaccatc
atgcgcaagaggctggatattcaggaagccctaaagaggcctataaagcaaaagagaaag
cttcggatcttcatatcaaacacgtttaaccctgcaaagcccgatgctgaggatggagag
ggcacggtggcatcatgggagcttcgtgttgaggggcgtctgcttgaagatacggctgtg
tcaaagtatgaagccaccaaacagaagaggaagttctcctctttcttcaagtctctggtg
attgaactggacaaagacttgtatggtccagataatcaccttgtggagtggcacaggact
gccaccacccaggagactgatggtttccaggtaaagaggcccggtgatgtgggggtccgc
tgcacagttctgctcatgctcgactaccagccccctcagttcaagctggacccccggctg
gctcgtatgctgggcattcacacccaaactagacctgtcattattcaggctttgtggcag
tacgtcaagacccacaaactccaagacccccatgagcgcgagtttatcaactgtgacaaa
tatctgcagcagatctttgagactcagcgaatgaagttctctgagatcccgcagcgtttg
catgcactcctgatgccaccagagcccatcattatcaaccatgtgatcagtgtggaccca
aatgaccaaaagaagactgcatgctatgacattgatgtggaggtggatgatacactaaag
acccagatgaactccttcctgctctccacagccagtcagcaggaaatagctggactggac
aacaagatccatgaaaccatcgagaccatcaaccagctgaagactcagagagagttcatg
ttgagttttgccagagatcctcagggctttatcaacgactggctccagtcccagtgtaga
gacctcaagaccatgactgatgtggttggaaatccagaagaagagagaagagcagagttt
tactaccagccgtgggctcaggaggctgtctgtcgctacttctactccaaggtccagcag
aggcgacaggagctggagcaggcgctcggcatcaggaacacctaa
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