Cheilinus undulatus (humphead wrasse): 121507201
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Entry
121507201 CDS
T07473
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121507201 (ddx19b)
03015 mRNA surveillance pathway
121507201 (ddx19b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121507201 (ddx19b)
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121507201 (ddx19b)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121507201 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF1028
Motif
Other DBs
NCBI-GeneID:
121507201
NCBI-ProteinID:
XP_041639345
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All DBs
Position
3:complement(23948027..23953991)
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AA seq
487 aa
AA seq
DB search
MATDSWAQAVDEQEAAAESIGNLQIKEKPEENGTTSNATDSGTAAAKSEGEGDKPADDDD
KEDKAAQSLLNKLIRNNLVNNSNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMGF
NRPSKIQETALPMMLAGPPQNLIAQSQSGTGKTAAFVLAMLSHVDPEKKYPQCLCVSPTY
ELALQTGKVIEQMGKHYSEVSLVYAIRGNKLPKNTKLQEQIVIGTPGTMLDWCGKFRFID
PKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPQTCQMLLFSATFEESVWNFAQRIVPSP
NIIKLKREEETLDTIKQYYVLCNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGE
LSREGHQVALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPV
DKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFSKKIERLDTDDLD
EIEKIAS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggactcctgggcccaggcagtggacgagcaagaagccgcggcggaatcgatt
ggcaatcttcaaataaaagagaaaccagaagaaaatggtacgacctcgaacgcgacagac
tctgggactgcagcggcaaaatcagaaggcgagggagacaagcctgcagatgacgatgat
aaagaggacaaagcggctcagtcgttgttgaacaagctcattcgaaataatcttgtcaat
aactctaatcaagttgaagttcttcaaaaggatcctaattccccgctgtactctgtcaag
tcctttgaggagttgcgactcaaaccacagctacttcagggtgtttatggcatgggtttc
aaccggccatccaaaatccaggagactgccttacctatgatgctggctggacctccacag
aatctgattgctcagtcacagtcaggaacagggaaaacggctgcctttgttctggccatg
ctcagtcatgtagatcctgaaaagaaatatccccagtgcctctgtgtgtcacctacctat
gaactggcactccagactggcaaggttattgagcagatgggcaagcactattccgaagtc
agtctggtctacgcaatcagagggaataaattgcccaagaacacaaagctgcaggaacag
atagttatcggcactcctggtactatgctggactggtgtggtaaattcaggttcatagac
cccaagaagatcaaggtgtttgtactggacgaggctgacgtcatgatcgcaacacagggt
caccaggaccaaagcatccgcattcagaggatgctgcctcaaacctgccagatgttgcta
ttttcagccacgtttgaagagtcagtgtggaactttgcccagcgcattgtgccttctcca
aacatcatcaaattgaagagagaggaggagactctggataccattaaacagtattatgta
ctgtgcaacagtaaagaggagaagtttcaggccctttgcaacatctatggagccatcact
atcgctcaggccatgatcttctgccataccaggaagacagctggctggcttgcaggggaa
ctgtccagagaaggccaccaggtggcgctgcttagtggagagatgcaagtggagcagagg
gctgctgtcatcgaacgcttcagagacggcaaggagaaggttctggtcaccacaaatgtt
tgtgctcgaggtattgatgttgagcaggtttctgtggtgatcaactttgacctgcccgta
gacaaggatggtaacccagacaatgagacatacctgcacaggattggccgcacaggtcga
tttggcaaaaggggactggccatcaacatggtggacagcaagatgagcatgaacatcctc
aataggatccaggagcatttcagcaagaagatcgaaagactagacacagatgatctggat
gaaattgagaaaatcgccagctaa
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