Cheilinus undulatus (humphead wrasse): 121507235
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Entry
121507235 CDS
T07473
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cud01009
]
121507235 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121507235 (stau1)
Protein phosphatases and associated proteins [BR:
cud01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121507235 (stau1)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
121507235 (stau1)
mRNA cycle factors
Stress granule specific factors
121507235 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Dicer_dsRBD
Calpain_inhib
Motif
Other DBs
NCBI-GeneID:
121507235
NCBI-ProteinID:
XP_041639393
LinkDB
All DBs
Position
3:32902909..32912861
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AA seq
695 aa
AA seq
DB search
MSQVQFQCPASPMPAAPAPVQMGPPQPGYSIPCASGTLPSESASQPIRSSALPAGSATPY
NITTVSNMANPKEKTPMCLVNELARFNKIQPEYKLLCEQGPAHSKIFRVRLTLGDQHWEA
EGTSIKKAQHSAAASALDETTLPKPTVRTPRNTGKHPADGITHTMELNALCMKLGKKPMY
KPIDPYPGMRPPNFNYNVRPPGPYQRSMQQYYYPFPPVGPMIYHMELSIGGQQFIGKGRT
RQLAKHDAAAKALKVLHKEPILQQLPEVNGEPEEENLNKSEISQVFEIALKRNLPVNFEV
LKEEGPPHMKSFVVCVTVGEFTGEGEGKSKKIAKKLAAAAVLGELKRLPHIPSTEKTLPR
TKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVT
VCGQTAEGMGPSKKVAKRNAAEKMLDLLGYKGPQPQPPKPALKTDEKTPLKKPGDGRKVT
FFEPGSAEEAALGPKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGACQGSQAKDYNRAMP
NPGKATITAMIANELLYAGTSLTAETILKNKNNMNQLPLGPLTRPSEQLSYLASVQGLQV
EYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDVESCHDMAALNILKLLSELDQQSNERT
GNGPVSRCGKQEVEGDLHLKQANSSTLAQTVDGTV
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggttcagttccagtgtccggcaagccccatgcctgctgcccctgccccagtg
caaatgggaccgccgcaacctggctacagtatcccctgtgcctcaggcacactaccgtca
gagagtgccagccagcctatcaggagctctgccctccctgcaggctcagccactccctac
aatataacaacagtatctaacatggcaaaccctaaagagaagacccccatgtgcttggtg
aatgagttagcccgtttcaataagatccaacctgagtataagctgttgtgtgagcaagga
ccagctcactccaagattttcagagtcaggctcacactaggagatcagcactgggaggca
gaggggaccagcatcaagaaagcccagcactctgctgcagcatctgccctcgatgagaca
acacttcctaagcccaccgtgaggacaccccgtaacacaggcaagcacccagcagatggc
attacacacaccatggagttaaatgcactatgtatgaagcttggtaaaaagcccatgtat
aaacccatcgacccatacccggggatgagaccaccaaacttcaactacaacgtccggcct
ccaggaccctaccagcgctctatgcaacagtactactacccttttcctccagtgggacca
atgatataccacatggagctttccatcggaggccagcagtttattggaaagggacgcaca
aggcagttagccaagcacgacgctgctgccaaggccctgaaagtgctgcacaaggagcca
atattacagcagttgccagaggtgaacggagaaccagaggaggagaacctcaacaaatca
gaaatcagtcaagtgtttgaaattgcacttaaacgcaatttacctgtcaactttgaggtt
ttaaaagaagaaggccctccccacatgaagagttttgtcgtgtgtgttacagtcggggag
ttcactggcgagggtgaaggaaagagtaaaaagattgccaagaagctggcagcagcagca
gtgctgggggagttaaagaggctgccacacatacccagcacagaaaagacgctgccacgc
accaaaaagaaaaccaaatccatcatcaagctccagaccagtccagaatatggtcagggt
atgaatcccatcagtcgcctggcccagatccagcaggccaaaaaggagaaggaaccagaa
tacagcatggtgacagagagagggctgcctcgccgccgggagttcgtcatgcaggtgaca
gtgtgtggccagactgcagaggggatgggaccgagcaagaaggtagccaaaaggaacgca
gcagagaagatgctggatcttctgggatataaagggccacagcctcagcctcccaaaccg
gcactaaagacagatgaaaaaaccccattgaaaaaacctggtgatgggcgtaaagtgacc
ttctttgaacctggctcagcagaggaggcagcgttgggtcccaaggaggaggacttccgc
ctgccttacttgagccaccagcagctgcctgcagggatcctgcccatggtccctgaggtg
gctcaagcagttggtgcctgtcaggggtcccaggctaaggactacaatcgagctatgcca
aacccaggaaaggccacaatcactgccatgatagccaatgagctgctttatgcagggacg
tccctgactgctgagactatcttaaagaacaaaaacaacatgaaccagctgcccctcgga
cccctgaccaggccttcagagcagctcagctatctggcatctgtgcagggcctgcaggtg
gaatacaaagattttcctaaaaacaataagaatgagtttgtgtcactgattaactgctcc
tcccagccgccgctcatcagccatgggattgggaaagatgtagaatcctgtcatgatatg
gctgcactgaatatactaaagttgctctcagagttggaccagcagtcaaatgaaaggaca
ggaaatggaccagtctctcggtgtggcaagcaggaagtggaaggtgacttgcacctcaaa
caggctaactcaagcacattggcacagaccgtggatggcactgtttag
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