KEGG   Cheilinus undulatus (humphead wrasse): 121507718
Entry
121507718         CDS       T07473                                 
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    121507718 (taf5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cud03021]
    121507718 (taf5)
   03036 Chromosome and associated proteins [BR:cud03036]
    121507718 (taf5)
Transcription machinery [BR:cud03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     121507718 (taf5)
   Coactivators
    SAGA/TFTC/STAGA complex
     121507718 (taf5)
Chromosome and associated proteins [BR:cud03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     121507718 (taf5)
    STAGA complex
     121507718 (taf5)
    TFTC complex
     121507718 (taf5)
    SAGA complex
     121507718 (taf5)
    SLIK complex
     121507718 (taf5)
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_CDC20-Fz TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_VPS8 WD40_MABP1-WDR62_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_WDR75_1st DSE1_N Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_SCAP PAC11 Beta-prop_RIG_2nd Beta-prop_IFT140_1st CFAP251_N Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_SPT8 ASA1 Beta-prop_WDR19_1st Tricorn_2nd Beta-prop_DCAF12 Beta-prop_Nup120_160 LisH_PAC1 WD_LRWD1 Beta-prop_NOL10_N PEP5_VPS11_N PROPPIN LisH_TPL Beta-prop_ACSF4 Beta-prop_WDR11_2nd LisH_UCP007778
Other DBs
NCBI-GeneID: 121507718
NCBI-ProteinID: XP_041639968
LinkDB
AA seq 749 aa
MAAVQGGMVDAVEEKEIKAEPSNDSSGSNNASDNRILSPSPGSSASTGGTKNAAGAPEDQ
QTLLAVLQFLRKNNLTESVDILRREAGLPEDSLELKGNDSSGAGSGAAGGNADTEGVDAS
ALLSRVTGSSSASAPAPTKAPGEDQPDVNVVLSAYSQQGDPALYGVYYSGLKKFIESVLD
CHRAELSQVFYPLFVHMYLELVYNNHENEAKTFFEKFSGDQECYYEDDLRVLSGLTKREH
LRGNETLLDFRTSKFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKS
QIDAMSGSLAGEAKREANKAKVYYGLLKEPEIELPLDDEDEEAENEEGKPKKKKPKKDSM
GSKSKKQDPNAPSQTRIPLPELKDSDKLDKIMYMKEATKKIRLGPDNLPSICFYSFLNAY
QGLTAVDFTDDSSLIAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDE
KTASESKILYGHSGPVYGISFSPDRNYLLSSSEDGTIRLWSLQTFTCLVGYKGHNYPVWD
THFSPHGYYFVSGGHDRVARLWATDHYQPLRIFSGHLADVTCTRFHPNSNYVATGSSDRT
IRLWDVLSGNCVRIFTGHKGPIHALAFSPNGKFLASGATDGRVLLWDIGHGIMIGELKGH
TDTIYSLKFSRDGEILASGSMDNTARLWDAMKAFDDLETDDFTATTGHIHLQDNSQELLL
GTYMTKSTPVIHLHFTRRNLLLAAGAYNP
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggcggccgtgcagggtggtatggtggacgcggttgaggagaaagaaataaaagcagaa
ccatcgaacgatagcagtggaagtaacaatgcaagcgataacagaattctttctccgtcc
cccggctccagtgcttcgacaggagggactaaaaatgcggcgggagccccggaggaccag
cagactctgttggctgtcctgcagttcctcaggaagaacaatctcaccgagtccgttgac
attttacgtcgtgaggcgggattaccggaggattcattggaactgaaagggaatgattcc
tccggggctggttcgggtgctgcaggggggaatgcggacacagaaggcgtagatgcgagc
gctttactcagcagggtgactggttcatcctccgctagtgccccggcgccaaccaaagct
cctggggaggatcaaccagacgtcaacgtggtgctgtcagcttacagccaacagggagat
ccggctctgtatggggtttattacagcggcctgaagaagtttatagaatctgttttagac
tgtcaccgagcagaactgtcccaggtgttttacccgctgtttgtgcacatgtatctggag
ctggtgtacaacaatcatgaaaatgaggccaagacattctttgaaaagttcagcggggat
caggagtgctactatgaagacgacttgcgtgttttgtctggactgacaaagagggagcac
ttgagaggcaacgaaactcttttggacttccggaccagtaagtttgtcctccgtatctcc
cgtgactcttaccagctgctcaagaggcacctgcaagagcgtcagaacaaccagatctgg
aatatcatccaagagcatctctacattgacatctttgatggcatgccacgcagtaagagc
cagatcgatgccatgtcaggcagcttggctggagaggcaaagcgcgaggctaataaggcc
aaggtttattatggactgctcaaagaaccagaaatagaactgcctcttgatgatgaggat
gaagaggcagagaatgaggagggtaaacccaagaagaagaaaccaaagaaggatagcatg
ggctctaaaagcaagaaacaagaccctaatgcaccttcacagaccaggatacctctacca
gaattaaaggattcagacaagctggacaagatcatgtacatgaaggaagccaccaagaag
attcggctggggccggataacctcccttcgatctgcttctactcttttctcaatgcttac
cagggtttgactgcagtggatttcacagatgactccagcctgattgcaggaggctttgct
gactccacagtacgagtttggagtgtaacaccgaaaaagcttagaaaagtcaagtctgca
gcagacttgaatctgatagacaaagagtctgacgatgtgctggagaggatcatggatgag
aagacagccagtgaatcaaagattctctatggacacagtggcccggtgtatggcatcagc
ttcagcccagacagaaactatttattatcaagttctgaagatggcacaatcaggctgtgg
agtcttcaaacatttacttgtttggtgggctacaaaggccacaactacccagtgtgggac
acccacttttcccctcatgggtactactttgtctctgggggacatgacagagttgcccga
ctgtgggcaacagatcactatcagcccctgcggatattttctggtcatctagctgatgtc
acttgcacccgcttccatcccaactccaattatgttgccacaggatcatctgatcgtacc
attcgcctctgggatgtccttagtggaaactgtgttcgcatcttcactggtcacaagggt
ccaatccatgctctagctttctctccaaatggaaagttcttggcctcaggcgccactgat
ggcagagttcttctgtgggatatcggacatggaattatgataggagaactaaaaggccac
acggatacaatctactctctcaaattcagtagagatggcgagatccttgcctctggctct
atggacaacactgcacgtttgtgggatgccatgaaagcatttgatgatctagagactgat
gattttacagccactacaggacacatccacctacaagacaactcccaggagcttctgttg
ggaacctacatgactaaatccacacctgttattcaccttcactttactcgcaggaacctg
cttctggctgcaggggcctacaatccctga

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