Cheilinus undulatus (humphead wrasse): 121507726
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Entry
121507726 CDS
T07473
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121507726 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121507726 (exosc1)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121507726 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
121507726 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
121507726
NCBI-ProteinID:
XP_041639978
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All DBs
Position
LG4
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AA seq
194 aa
AA seq
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MSPMKLCVPGDKLCSVEDCIPGTGVYLRHGYIYSSLAGYVLRKNEGEELPVISVVRETET
QLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRKEDVRATEKDKVETYKS
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPVSWCEMQCPRTHAKE
FRKVARVQPEYLQA
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccaggtgacaagctgtgcagtgtagaagactgtata
cccgggacaggagtatacctgcggcacggctacatatactcgtctctagcaggctatgtg
ctgaggaaaaacgagggagaggagttacctgtgatctcagtggtgagagaaacagagaca
caacttctaccagatgtaggagcaatagtcacgtgtaaggtaactagcatcaaccccagg
tttgcaaaagtccacatcctctatgtgggctccacaccgctgaaggatcgcttcagaggg
acgatcaggaaagaagatgtgcgtgcaacagagaaggacaaggtggagacgtacaaaagc
ttcagaccaggtgacatcgtcttggcaaaagtcatttctctgggagacgtgcagtcaaac
tacctgctaacgacagcagagaacgagctgggtgtggtggtggcacacagtgaagcaggt
gctcagatggtccctgtcagctggtgtgagatgcagtgcccacgaacacatgccaaggag
ttccgcaaagtggcacgagtgcagccagagtatctacaggcatga
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