Cheilinus undulatus (humphead wrasse): 121507979
Help
Entry
121507979 CDS
T07473
Symbol
helz
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121507979 (helz)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
121507979 (helz)
3'-5' decay
Other 3'-5' decay factors
121507979 (helz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
zf-CCCH
AAA_19
AAA_30
UvrD-helicase
ResIII
PAM2
zf_CCCH_4
PhoH
AAA_16
AAA_22
zf-CCCH_4
VPS13_N
Motif
Other DBs
NCBI-GeneID:
121507979
NCBI-ProteinID:
XP_041640349
LinkDB
All DBs
Position
4:23801751..23902907
Genome browser
AA seq
2032 aa
AA seq
DB search
MADRRAEKSCEEASRSLTRREYEAAVSHSTDALVVLAPQAQSSCAPVPPSPPSATAGPLR
SRVLLYRIAAFLQLKNYDEADEDCKHVLAEEMARGDGSLQSSLRSMLLDGSLQEVISILS
KALYGEQMNGIVTKDMSRLKMLFSEIEAINREMVPEYTDDQEEEVQDGWQFRPPPRGVTS
SEEYTLCKRYLEQGLCRYGAQCTSAHSQEELMEWQKRYASRLIRLKQQQESKHFTENYME
TLIEKWMNSLSPEKVLSDYLEGVNVETSSSLSVTVTTKKSSHAWTFSLLCKPARKLYRIA
LLYDAHRPHFFITGVSAGERLQALPKGCQEWTPEEETAVAADNGLDHCVYKVAVGFSTEI
FGTFRQTVVFDFGSEPVLMQRVMVDAASIEDLEHLMAARQQLLITAKRWDSSCKTIVEFV
PNEAMAELERSLLSRYQIPLSADQLFTQSVLDKSLTKDNYQARLHDLLYIEEIAQYKEVS
KFNIKVNLQLVTSFMLTGISVGAKYAQNGQLFARFKLTETLSEDTLAGRLVMTKVNSVLL
LPLGREGVNCQPPPGVKERVYEAVIEEKTKDYIFLRICKECCEELGLIPDREIQVELQFQ
LNRLPLCEMHYALDRIKDNTILFPDVSLVPTIPWSPNRQWDEQLDPRLNAKQKEAILAIT
TPISIPLPPILIIGPYGTGKTFTLAQAVKHILRQDHSRVLICTHSNSAADLYIKDYLHPY
VEAGNPHARPLRVYFRNRWVKTVHPVVQQYCLISSTQITFQMPTKEDILRHRVVVVTLST
SQYLCQLDLDPGFFTHILLDEAAQAMECETIMPFALASKTTRIVLAGDHMQLSPFVYSEF
ARERNLHVSLLDRLYEHYPPEYPCRILLCENYRSHEAIINYTSELFYDGKLMASGKQPSH
KDFYPLTFFTARGEDVQEKNSTAYYNNAEVFEIVERVEELRKKWPVAWGKLDEGSIGVVS
PYADQVFRIRAELRKKRMHEVSVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTAIKRKEQ
LVEDSTEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSVGRCRKFWEHFVSICHEN
SSLHGITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRPLQGHHSSSQALHPHHHPHPQ
HAQPTSNKQVPQQPQQQQQSPPKGKHANHNEHFPPEGYVQPNPAMLMGNPIRAFTPPLGG
TQAGMGKSPSPVQRIDPHTGASILYVPAVYGGNMVMSMPLPLPWPGYQNRFAVDPRIMSH
PAAMAYNFNLLQAQNRGSPIPYSGMAHPSPLGMGQPSPDKELQADPIRNGKLEGCPKPEQ
SRLQTPERKTADMKEKQGDLDTGQNRSLDSEGLVGFPNALLHRKDPSAAQRPLNYHLAPP
NTGFPPHPASGRAFPPQYPLSRLPYRVSQPQHPGMAQQSQQQQQLSPAYTGGSHNASFFS
GPVPPHRAVQSPTLDGPEPGGVEEMSGSIRTPMGQPGGHHPGMSQHNRVNSFGEDGQDGN
LGDSLDLQGPLALEALSQQQQQAARLGQWGEAATPFLPSSVAFPLPQQLAHLTQPNMARF
PHQLLRAASWSLSANMEDEGVNSASTGPPYNRYPGLLREMPPQEQPEPREAAEMQPPPQS
RLLQYRQSQSRASGDPSSSLAASSNHAGPFPSGPYPHDSNRDLLNDNLLSNPALQHPGNP
LYNTGNYPHQPPAHSASPPPSQVKYLLQEAQWSHGGAASVSPPQQNHLLGNQGHSLPYGL
PIMAHPSRQEQVHLMQLHHQHQQQQQQQQQQQQQQQQQQQQQQHHQHQQSQGQDQESYHP
LSPRTSAAAALHDIDEYEPRGPGRPLYQRRISSSYPDDSSPTNTHNALSQQSQPCSSDPQ
DHPHPHIQHHQHPHAPYGYSSHDLWPSNGGGPGPFQNIPCNGAGTLTQHRDIMASKALRQ
SEEQVKAGATAAQQSHPHSLNSLQHLGQFPPLMPNNKQQQQPPPQAPTEAGQGPPNLSKP
PTMSYASALRAPPKPRAVRPDQAKKNSDPLSLLQELSIGSSNGSNGYYSYFK
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaggagagcggagaagtcatgtgaagaagccagcagatcgttaaccaggcgg
gagtacgaggcagcagtcagccacagcacggatgccctggtggtccttgcaccccaagcc
caatcatcctgtgcccctgtcccgccgagccctccatccgccaccgccggacccctccgc
agccgcgtcctgctctacagaattgctgccttcctgcagctgaaaaactatgatgaagca
gatgaagactgcaaacatgtcctggcagaggagatggccaggggagacgggtcgctacag
tccagcctgcgctccatgctgttggatggcagcctgcaggaggtgatcagcatcctctcg
aaagccctatatggagagcagatgaatggcatcgttacaaaagacatgagcagattaaaa
atgcttttctcagaaatagaggctataaatagggagatggtaccagaatacacagacgac
caggaggaagaggtccaagatggctggcagttcaggccccctcccagaggagtcaccagc
agtgaggagtacactctatgtaaaaggtatttggagcagggcctgtgtcggtatggggct
cagtgtacgtcagcccactcgcaagaggagctgatggagtggcagaagcgctacgcgtca
cgcctcattcgcctcaagcagcagcaggagagcaaacacttcacagagaactacatggag
acactgatagagaaatggatgaactccctctccccagagaaagtgctaagtgactattta
gaaggtgtgaatgtagaaaccagctctagcctctctgtgactgtcaccaccaaaaagtcc
tcccatgcctggaccttctccttgttgtgcaagcctgccagaaagctgtacagaatcgcc
ctgctctacgatgcccatcgaccacacttcttcatcaccggtgtgtcagcaggggagcgg
ctacaagctctccccaaaggctgccaagagtggactccagaagaggagacagcagtggcg
gcagacaatggcctagaccactgtgtctataaggtggcagtgggcttcagcacagagatc
tttggtaccttcagacagactgttgtttttgactttggctccgaacctgtgctgatgcag
cgggtcatggtggatgctgcctctattgaagacttagaacacctgatggcagccaggcag
cagctcttgatcacggctaagcgctgggactcttcctgcaagaccatcgtagaatttgtc
cccaatgaagcgatggctgaactggagcgaagcctcctctcccgctatcagatccctttg
tcggcagaccagctcttcacccagtcggtcctagacaagtcacttaccaaagacaactac
caggcccgactgcatgacctgctctacatagaagagattgcacagtacaaggaagtcagc
aagtttaacatcaaagtgaacctgcagcttgtcaccagctttatgcttactggcatctct
gttggagcaaagtatgctcagaacggacagctctttgcacgcttcaaactcactgaaaca
ctttctgaggacacactggctgggcggctggtgatgaccaaggtaaactcagttttgctg
ctgccattgggccgtgagggtgttaactgtcagccaccacctggtgtcaaagagagggtt
tacgaggctgtgatcgaggagaagaccaaggattacatcttcctaaggatctgcaaagag
tgctgtgaggagctggggctgatacctgacagagaaatacaggtggagctccagttccag
ctgaacagactgccgctctgtgagatgcattacgccctggaccgcatcaaagataacacc
atccttttccctgatgtcagccttgtccccacaatcccatggagccccaacaggcaatgg
gacgagcagctggatccccgtctgaatgccaagcagaaagaggccattctggccatcacc
acacccatctctatccccctgccacccatcctcatcatcggaccttatggcaccgggaag
accttcaccctggcgcaggccgtcaagcacatcctccgccaggatcacagcagggtcctc
atctgcacccactccaacagtgcagctgacctttacattaaggactaccttcatccttac
gtagaagcaggcaatccgcatgccagacctctcagggtatacttcaggaaccgctgggtt
aagacggttcacccagtggtccagcagtactgtctcatctccagcacacagatcactttc
cagatgcccacaaaggaggacatcctcaggcaccgggtagtggtggtcaccctcagcacc
tcgcaatacctctgccagctggacttggaccctgggtttttcactcatatcctattggat
gaagctgcccaggccatggagtgtgaaacaatcatgccttttgctctggctagcaaaacc
acacgcatcgtgcttgctggagaccacatgcagcttagtccatttgtgtacagcgagttt
gcgcgggagcgtaacctgcatgtgtcactgctggaccggctgtatgagcactacccccct
gagtacccatgtcgcatcctcctgtgtgagaactaccgctcccatgaagctatcatcaac
tacacatcagaattattttacgatggaaagctcatggcaagtgggaagcagccctcccat
aaggacttctaccctctgaccttcttcacagcaagaggagaagatgtccaagagaagaac
agcactgcctactacaacaatgccgaggtgtttgagattgtggagcgggtggaggagttg
cggaagaagtggcctgtggcctggggcaagctggatgagggcagcattggagtggtgtca
ccgtacgctgaccaggttttccggattcgtgctgaactccgaaagaagaggatgcatgag
gtcagcgtggaaagagtgcttaatgttcaaggtaagcagttccgggtgcttttcctgagc
acagtcaggacaaggcatacctgcaagcacaaacagacggccatcaaacgcaaagagcag
ctggttgaggactcaacagaagacctcgactatggattcctctccaactacaagctactc
aacacggccatcaccagagcccagtccctggttgcagttgtgggagaccccattgcgctg
tgctctgttgggcgctgcagaaaattctgggagcactttgtctccatttgccatgagaac
tcaagcctccacggcatcacctttgagcagataaaagctcagctggaggctctcgagctc
aagaagacctatgtcctgaacccgctggcccccgagttcatcccccgcgctctcaggcct
ctgcaggggcatcactcttcttcgcaggcccttcatcctcaccatcatcctcatcctcag
catgcacagcccacctccaacaagcaggttccccagcagccacagcaacagcagcagtca
ccccctaaaggaaaacatgcaaaccacaatgagcactttccacctgaaggatatgtccaa
cccaacccagccatgctgatggggaacccgatcagggcattcacaccacctttgggtggc
acacaagctggcatgggcaagtcacccagccctgttcagaggatagatcctcatacaggc
gccagtatcctctacgtcccagctgtgtatggtggaaacatggtcatgtccatgcccctg
cctttgccctggcccggttaccagaatcgctttgccgtggaccctcgcatcatgagccat
cctgcagccatggcgtacaactttaatctgttgcaggcccaaaatcgaggctcccccatt
ccttacagtgggatggcccacccctctcctctaggaatgggccagcccagcccagacaag
gagctacaggcagaccccatcagaaacggtaaattagaaggctgtccaaagccagaacag
agccgtcttcagacaccagagagaaaaactgcagacatgaaggaaaaacagggagattta
gacactggccagaatcgaagtttagactcagaagggcttgtaggatttcccaatgcactt
cttcatcgaaaagacccctcagctgcccagagacccctcaactaccacctggcaccccca
aacacaggttttcctccacatcctgccagtggaagagccttccccccacagtatcctcta
tccaggcttccttaccgagtcagccagcctcagcaccctggtatggcccaacagagccag
cagcagcagcagctgagccctgcctacactggtggcagccacaatgcttccttcttcagt
gggcctgtacctcctcacagagccgttcagtcacccaccttggatgggccagagcctgga
ggggtggaggaaatgagtggctccattaggactccaatgggccaaccagggggccaccac
ccaggcatgtcacagcataacagggtcaacagcttcggagaggacgggcaggatggaaac
ctgggagatagcctggacctgcaggggcccctggctctcgaggccttgagccagcagcaa
cagcaggcagccaggttgggccagtggggggaggcagcaactccatttctccctagcagc
gtcgcctttcctctgcctcaacagctcgctcacctcactcagccaaacatggctcgcttt
ccccatcagctgctccgggcagctagttggagtctaagtgccaatatggaggatgaaggt
gtcaattctgcctccaccgggccgccctacaacaggtacccgggccttctgagagagatg
cccccacaggagcagcctgaacccagagaagcagcagagatgcagcccccaccacaatct
cgtctcctccagtatcgccagtcccaatcccgtgcctcaggtgacccttcatcctcttta
gctgccagctcaaatcatgccggccccttcccatcaggaccctacccccatgacagcaac
cgcgacctccttaatgacaaccttctcagcaaccctgccctgcaacacccaggaaacccc
ttgtataatactggtaactacccacatcaaccaccagcccactctgccagcccccctccc
tcacaggtcaaataccttcttcaagaggcccagtggtcccatggtggagctgcatcagtg
agcccaccacagcagaaccaccttctagggaaccagggccatagtcttccttatggactg
cccatcatggctcacccaagtaggcaagagcaagtccacctgatgcaacttcaccatcag
caccagcagcaacaacaacaacaacagcagcagcagcaacaacaacagcaacagcagcag
cagcaacagcatcaccaacaccaacaaagtcaaggtcaagaccaggagtcctatcaccct
ttgtcccctagaacatcagcagccgcagccctacatgatatagatgagtatgaacccaga
ggtccaggtcggcccctttatcagcgtcgaatctcctccagctacccagacgactcgtct
ccaaccaacacccacaacgccctctcccagcagtcccagccctgttcatcagacccccaa
gaccatccacatccacacatacagcatcatcagcacccacatgccccctatggttactcc
tcacatgacctctggcccagtaatggcggtggtcccggtccgttccagaatattccatgt
aacggagctggcaccctcactcaacatcgagacattatggcatccaaagctcttcgtcag
tcagaggagcaggtgaaggccggagccacagcagcacagcagagccacccacactccctc
aactcccttcagcacctcggacagtttcctcctcttatgcccaataacaagcagcagcag
cagccaccgccgcaggctcccacagaggctggacaagggcctccaaatttgagcaaaccc
ccaaccatgtcctacgccagtgccctacgcgctccacccaagccccgagctgttcggcct
gaccaggccaagaagaatagcgacccactctccctcctgcaagagctgagtataggaagt
tcaaatggtagcaatgggtactattcctactttaaatga
DBGET
integrated database retrieval system
