Cheilinus undulatus (humphead wrasse): 121508001
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Entry
121508001 CDS
T07473
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
121508001 (taf5l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121508001 (taf5l)
03036 Chromosome and associated proteins [BR:
cud03036
]
121508001 (taf5l)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
121508001 (taf5l)
Coactivators
SAGA/TFTC/STAGA complex
121508001 (taf5l)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
121508001 (taf5l)
STAGA complex
121508001 (taf5l)
TFTC complex
121508001 (taf5l)
SAGA complex
121508001 (taf5l)
SLIK complex
121508001 (taf5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
TFIID_NTD2
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_IFT140_1st
RMC1_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_DCAF4
Beta-prop_WDR19_1st
PEP5_VPS11_N
PROPPIN
Beta-prop_IP5PC_F
WD_LRWD1
Nbas_N
Beta-prop_ELP1_1st
Lysis_col
Motif
Other DBs
NCBI-GeneID:
121508001
NCBI-ProteinID:
XP_041640383
LinkDB
All DBs
Position
4:complement(54759024..54763814)
Genome browser
AA seq
599 aa
AA seq
DB search
MKRVRTEQIQYAVAQYLKRRQYVDTDGSLKGAKLFQSAEEMAASLTVQTESGCANIVSAA
PCQSDPQQYETQYSRLRNFLSETDISWAKEVSSILYPLFVYLHLDMVQCGLKGAVDGFYS
RFHGAFLQDSEQRVIVEQLRHVLTSQDVAANPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
EDNSALCRAISTHLQLEVTTLRRTDYQLYGAAGGTAAAPNSTSSWAGVDGAEGGEGVEVP
AGIPQSEAALEALQDCIKKVREGPPTLTTVCFYAFHHTEQMLNTAEVSADSRLLSAGFDS
STVKLWSLRARKLKAKPHQADVSHVHLACDVLEEEDEEDSSGSEIKTLRGHSGPVFRTAF
LTDSSGLLSCSEDTTVRYWDLGSFTNTALYQGHAYPVWDVDVSPCSLYFASGSHDRTARL
WTFSRTYPLRLYAGHLADVDCIKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRGP
VLSLAFSPNGKYLASAGEDQRVKLWDLSSGVLFKDLRGHTDSVTSLSFSPDSSLVASSSM
DNSVRVWDIRNSHGGTPADGSSSELVGQYTGNTSNVLNVQFMACNLLLVTGTAQEKTEQ
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgggttcgaactgagcagatccagtatgctgtggctcagtacctgaagaggagg
cagtacgtggacaccgatggttccctgaagggagccaagctctttcagtcagcagaggag
atggctgccagcctcaccgtgcagaccgagtctggatgtgccaacatcgtctctgctgca
ccgtgccagtctgacccccagcagtatgagacccagtactccaggctgcgtaacttcctc
tcagaaacagacatatcatgggcaaaggaggtgagcagcatcctctacccgctttttgtc
tacctccacctggacatggtgcagtgcggcctgaagggggcagtagatggcttttacagt
cgtttccatggtgcatttcttcaggacagtgagcagcgcgtcatcgtagagcagctccgc
catgttctcacctctcaggacgtcgctgcaaaccccaaactgagcgctttccttgagcac
aagtacgtggttcacctgacggagccggcctacagctacctgctgcgctacctgcagagt
gaggacaacagcgccctctgcagggcgataagcacacatctgcagctggaggtcaccacc
ttaagacgtacagactaccagctttacggagctgcaggcgggacagctgccgccccaaac
tccacctcatcctgggctggagtggatggggcggagggtggggagggggtggaggtccca
gcagggatcccgcagagcgaggcggccctggaggctctgcaggactgcattaagaaagta
cgtgaaggcccgccgacgctcaccactgtgtgtttctatgccttccaccacacggagcag
atgctgaacacggcggaggtgtcggcggacagccggctgctgagcgccggcttcgacagc
tccactgtgaaactgtggagcctccgagcccgaaaactgaaggccaaaccgcatcaggct
gacgtgtcgcatgtccacctggcctgtgacgtgctggaggaggaggatgaagaggacagc
tccggcagcgagataaagactctgcggggccacagcggccccgtgtttcggaccgccttc
ctgacagacagctccggcctgctctcctgctccgaggacacgaccgtccgctactgggac
ctgggcagcttcacaaacacggcgctctaccagggccacgcctacccggtgtgggacgtt
gatgtcagcccctgcagtctttactttgccagcggctcccacgaccgcaccgctcgtctc
tggacgttctcacgcacctaccccctacggctgtacgcggggcatctcgctgatgtcgac
tgcatcaagttccatccgaactccaactatctcgccaccggctccacggacaagactgtc
cgtctgtggagcacccaacagggggcgtcggttcgcctctttactggccaccgcggcccc
gtactgtccctcgctttctctcccaatgggaaatatctggcgtcggccggtgaggaccag
agggtgaagctgtgggacttatcgtcaggggtgttgtttaaagacctgcgtggtcacacg
gacagcgtcaccagcctgtccttcagccccgacagcagcctggtggcgtcttcatctatg
gacaactctgtccgggtttgggacatccggaactcccacggtgggacgccggctgacggc
tcgtccagtgagctggtgggacagtacactggaaacaccagcaacgtcctgaatgtccag
ttcatggcgtgtaacttactgctggtgacggggacggcacaggagaaaacagagcagtag
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integrated database retrieval system
