Cheilinus undulatus (humphead wrasse): 121508379
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Entry
121508379 CDS
T07473
Name
(RefSeq) ATP-dependent RNA helicase DDX39A
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121508379
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121508379
Spliceosome [BR:
cud03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
121508379
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
121508379
NCBI-ProteinID:
XP_041641117
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All DBs
Position
4:25553520..25566167
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AA seq
427 aa
AA seq
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MAETDVDNELLDYEEDEEPQGAPESGTSANKKEVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDILCQAKSGMGKTAVFVLATLQQIEPVDGQVSVLVMCH
TRELAFQISKEYERFSKYMPTVKVSVFFGGMAIKKDEEVLKKNCPHIVVGTPGRTLALIR
NKSLSVKNIKHFVLDECDKMLEQLDMRVDVQDIFRATPHDKQVMMFSATLSKDIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYCKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALSQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAVTFVSDETDAKTLNEVQDRFEVNVAELPDEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagacagacgttgacaatgaacttctcgactatgaggaagatgaggagcctcag
ggagcccccgagagtgggacctctgcaaacaaaaaagaggtgaaggggtcttatgtatcc
atccacagctcgggcttcagggattttcttctcaaacctgagctgctccgtgccattgta
gactgtggttttgagcatccttcagaagtccagcatgagtgtattcctcaagctatcctg
ggcatggacatcctgtgtcaggccaagtctggtatgggaaagacagcagtattcgtactg
gccaccctgcagcagatagaacctgtggatggtcaggtgtctgtgcttgtaatgtgccac
acaagggagttggccttccagatcagcaaggaatatgagcgtttctccaagtacatgcct
actgtgaaggtgtcagttttcttcggcggcatggccattaaaaaggacgaggaagtcctg
aagaagaactgccctcacatcgttgtagggactccaggacgaaccctggccctcatccgc
aacaagagcctcagcgtaaagaacatcaaacactttgtgcttgatgagtgtgataagatg
ctggagcagctggacatgagggtcgacgtccaggatatattcagggcaacaccacatgac
aagcaggtgatgatgttcagcgcaacattaagcaaggacatccgccctgtgtgcaggaag
ttcatgcaagatccaatggaagtgtttgtggatgatgagaccaagctgactctccatggc
cttcaacaatattactgcaaattgaaggacaacgaaaagaaccgaaagctctttgacctg
cttgatgtactagagttcaaccaggtggtgatctttgtgaagtctgtgcagcgctgtatg
gctctgtcccagctgctggttgagcaaaactttcctgccatagcaattcacagaggaatg
gcacaggaggagcggttatcacgctatcagcagttcaaagactttcagcgccggatcctg
gttgcaacaaacctgtttggccgaggcatggacatcgagcgagtcaacatcgtcttcaac
tacgacatgccagaggattctgacacgtaccttcacagagtggcccgtgctggcaggttt
gggaccaaaggccttgccgttacttttgtgtcagacgagacggatgccaagaccctaaat
gaagtccaagaccgctttgaggtcaatgtagcagagctaccagatgagattgacatctcc
tcctacattgaacagtccagatga
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