Cheilinus undulatus (humphead wrasse): 121508609
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Entry
121508609 CDS
T07473
Name
(RefSeq) collagen alpha-1(XVII) chain-like
KO
K07603
collagen type XVII alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121508609
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Gene cluster
GFIT
Motif
Pfam:
Collagen
BSMAP
Motif
Other DBs
NCBI-GeneID:
121508609
NCBI-ProteinID:
XP_041641500
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Position
LG4
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AA seq
1580 aa
AA seq
DB search
MDNQTTAQTVSSVGGAGGSSKVVTKTVTTTTRLTSQSKLCLKGSVAKAASGSSGGTSSSV
LITSSSSHSSSSAGSGIISVTTIGASSSSSSSAVSSGGGSSAASGGSAAELKAAAGGSSS
MSSGFVSSSREVKREGGLGAVTVSTVTKTSYSSGGSGEAKKGSSSVVTHSPVPKERKTTT
TMAAALSEVFDESSSTNSSPEYNRKEYGMFITTSTSATRGRAQSRESEIRTRLQSASPTA
CWTELDDVKRLLRGNRSTSTSASPSPPRSPNNTLPIPKKGSVETRTMSESSTTAEHYGSI
WSGGVSSSYSYNTNPNNLATGSTLYQSGGVQNNLTFSSPSVNGGLSAGGSVPVYGLQNNL
SSTTSAALLTSAGTGAPMVYGVQKNASGPGLSPTTVRPSSPVTEESSGKDFKFVLIEKEN
APVKKETERLIMTKDTGKQFMSAAPAPVSATYSEDSLKREKQKLSSSTVEEGTDTKSASL
KVSTKDKATYAEIREDKSGLGFLSCCSWWKWLLGLLLSLLLLLGLLFGLIAVGEEMKHLK
NRVDALEAIVGTASARTSRLSSSPGVNIIDPLDSSYIERSSAGSTLTRSDNNINLGAAGP
GAGTGSGPGAGPGPGVDNVALQRTVQQLVRAELRSDVIRDTLAYSLKGEKGDPGPKGDPG
QLGQKGDSGFPGLPGPPGQMGHPGLDGPRGPKGSAGEAGAEGPPGQRGREGPMGPRGEVG
PPGIGEKGERGEAGHPGPSGVAGPVGPKGAMGEHGASGSPGAPGGKGFPGEPGAPGPKGD
RGTAGLPGTKGDLGERGSRGPAGEPGQPGPQGPPGAKGSKGVTGEAGSMGPPGARGPPGT
PGDAGSPGITGPQGPPGLAGNPGQPGAQGEPGVPGKVVGPIGSDAVSIPGPPGPAGPPGP
PGSPGLSGPIGPAGVPGQPGPKGAAGEKGDKGDKGDKGGKGDKGEPGENGEPGKPETDSS
SGAGQPGPPGPPGPPGPPGEPGPQGPAGESKEGPPGQRGPPGEPGVGVPGPPGEKGEPGS
FVPTSESFFAGPPGPPGPQGPRGPPGDQGPQGYQGEPGQPGLPGSPGEASVGFPGLPGTI
GPAGPPGPAGPKGDDGDPGSPGAPGFPGAPAGPQGPPGPPGPPGRDGSGSGSTDVGQYIA
EYLQSGDVRNYLAGPPGPPGPPGAPGDGSVDDLANRVLAYIHSRGYDGTPGPPGPPGPPG
SASVNDIVSLLQREDVRRYMEGPRGPPGPPGAPGSGAGTYVNTQEVAEHVLSLMNGHMGA
QGPPGPPGAPGIPSGLGGQQGPPGAPGFPGPPGPPGPRGPPGYTNIISGDIRDYLQSVSY
RGPPGLASLAEHRDRDMLRAEQQEYIKGDDLAGAMFGLPGPPGPPGPPGHKGDPGVPGSL
DSGDYSNMAAKVTDYIKSHGLLQDVVRGSERVVQGPPGPPGLPGVPGHSQWISSREDIAD
VVEYIRSHGILQGPPGPPGPPGYSRLFGPHGNATDLIEYIKSHGLLRDIERNSNDRVIQG
PRGPPGPPGPPGYSRLFGSDTNVTDLVEYIRAHGAIVGPPGRPGQKGDIGYPGPKGEKGE
RGLPGPEGRRRQDGGRGQFI
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atggataaccaaactacagcacagaccgtcagttcggttggaggtgctggaggaagtagc
aaagtggtcacaaaaacagtaactacaaccacaagactgacatcacaaagtaagttgtgt
ctcaaagggtcagttgcaaaagctgcatcaggaagctcaggaggcacgagcagctcggtt
ttgatcacatccagtagctcacactcttccagctcagctggatcaggaatcatcagtgtc
actactatcggagcatcttcttcctcttcttcctctgctgtatcctcaggaggaggaagt
tctgcagcttctggaggctcagcagcagagctgaaggctgctgcaggaggttcttccagc
atgtcctctggatttgtgagcagcagtagggaggtaaaaagagaagggggtcttggtgct
gtgacagtttcaacagtcacgaagaccagctacagctctggaggatccggggaagcaaaa
aaaggatcatcctcagtggtcacgcactcaccagtcccaaaagagaggaagaccaccacc
accatggcagcggctctgtcagaggtctttgacgagagttcaagtacaaactcatctcca
gagtacaacaggaaggagtacggtatgtttattacaacttcaacttctgccaccagaggg
agagctcagagcagagagagtgagatcagaaccaggcttcagagtgcttcacctacagca
tgctggactgagctagatgatgtgaagcgtctgctgagaggtaaccgctccaccagcacc
agcgccagccctagccctcctcggtcccccaacaacaccctgcctatccccaagaagggc
agcgtggagaccaggaccatgtctgagagctccaccacagcggagcactacggcagcatt
tggtctggaggtgtgagcagcagctacagttacaacacaaaccccaacaaccttgctacc
ggctccaccctttaccagtcaggaggagttcagaacaacctgacgttcagctctccctca
gtgaatggtgggctctctgcaggcggctctgttcctgtctatggacttcagaataatctg
tccagtaccaccagcgcagctctgctcacttcagctggaacaggtgctccaatggtttac
ggtgtgcagaaaaatgcgtcaggccctggattgagtccaaccacagtgagacccagcagt
cctgttactgaggagtcctctgggaaagactttaagtttgtgctgatagagaaagagaac
gctccggtgaagaaggagacagaacggctgattatgaccaaagacacggggaagcagttc
atgtccgctgctcctgctcctgtttctgccacgtactctgaggactcactgaagagagag
aaacagaagctctcgtccagcacagtggaggaaggaacggatactaaatctgcatcactg
aaagtatccacaaaagacaaagccacctatgcagagatccgtgaagataagtcagggctt
ggtttcttatcctgctgcagctggtggaagtggcttctgggccttctgctcagcctgctc
ctcctccttggactcctctttggcctcatcgctgtgggtgaggaaatgaaacatctgaag
aaccgtgtcgatgccctggaagccatcgttggtacagcatcagcccgaaccagccgcctg
tcgtcctcccctggtgtcaatatcattgacccactggactcgtcgtacatagaaaggtcc
tctgctggctccactctgactcgctctgataacaacatcaacctgggagctgctggaccg
ggagcaggcacagggagtggaccgggagcaggaccaggaccaggagtggataatgttgct
ctacagagaactgtgcagcagctggtcagagctgagctccgctcggatgttatcagagac
acactggcatactcattgaaaggagagaaaggagatccaggacctaaaggtgatcctggg
cagctcggacagaaaggtgacagtggatttcctggcctacctggtcctccaggccagatg
ggtcacccaggactggatggaccacgagggccaaagggaagtgcaggtgaagcaggtgct
gagggaccaccaggacagaggggccgggagggaccaatgggccctcgtggagaagttgga
cccccaggaattggagagaaaggagagagaggtgaggcaggacatcctggtccttctggt
gttgctggacctgtggggcccaaaggtgccatgggtgagcatggagcctcaggaagccca
ggtgctccaggtggaaaaggattcccaggagaacctggagctccagggccaaaaggtgat
cgaggaacagcagggctgccaggaaccaaaggagatctgggagagaggggctcacgtgga
ccagcaggtgaaccaggacaacctggacctcaaggccctcctggagcaaagggatctaaa
ggagtcactggtgaagcaggttcaatgggacctcctggagcaagaggaccaccaggaact
cctggagatgctgggtccccaggcattactggaccccaaggaccccctggtcttgctgga
aatcctggacagcctggcgctcaaggtgaaccaggagtacctggtaaagttgttggtcca
attggctctgatgctgtgtctattcctggacctcctgggcctgctgggcctccaggccct
cctggaagtcctggtttgtctggtcccatcggccctgctggtgtacctggacagcctggt
cccaaaggagcggccggggagaaaggtgataaaggtgataaaggtgataaaggaggaaaa
ggagacaaaggagaaccaggggagaatggagagccaggaaaacccgaaacagacagctcc
tcaggggctggacagcctggtccacctggacctccaggacctccagggcctcccggagag
cctggtcctcaaggtcctgctggtgagtccaaagaaggtcctccaggacagagaggtcct
ccaggggagccaggtgttggtgtgcctggacctccaggtgagaaaggagaacctggcagc
tttgtgcctacctcggaatccttctttgctggaccaccaggacctccaggaccccaaggc
cctcggggtccacctggtgaccaaggaccacaaggatatcaaggggaaccaggtcaacca
ggcctaccaggaagtccaggggaggccagtgttggtttcccaggtctacccggaacgatt
ggcccagcgggtcctccaggcccagcaggtcctaaaggcgatgatggagaccctggcagc
cctggtgccccaggattccctggagcgcctgcaggcccccaaggtcccccaggacctcct
ggtccaccaggcagggatggaagtgggtctggatcaactgatgtaggacagtacattgca
gaatatttacagagtggtgacgtcaggaattaccttgccggacctcctggtcctcctggt
cctccaggggccccaggggacgggtcggttgatgatctggccaatagagttctcgcctac
atccacagtagagggtatgatgggactcctggccctcctggtcctcctggtccacctggc
tccgcctctgtcaatgacattgtcagcctattacaacgagaggatgtgaggagatacatg
gaaggtcctcgcggtccaccaggacctcctggagctccaggttctggcgctggcacctac
gtcaacacccaggaagtagcggaacatgtcttaagccttatgaatgggcatatgggtgcc
caaggtcctccaggacctcccggagctccaggtattccttctggacttgggggccaacaa
ggacctcctggtgccccaggtttccctgggccacctggaccaccaggaccccgtggacca
ccaggatataccaacatcatcagcggagacattcgagattacttacagagtgtttcctac
agaggccctcctggactggcttccttagctgaacacagagacagagatatgctaagagca
gagcaacaggaatacatcaagggtgatgacttggcaggagctatgtttggacttcctggt
ccaccaggccctcctggacccccaggacacaagggagacccaggtgtacctggcagcctg
gactctggagactactccaacatggctgctaaagtaactgattacatcaaatcccatggt
ctgctccaggatgttgttagaggctctgaacgggttgttcagggacctccaggacctcct
ggacttccaggagtgccagggcacagccagtggatcagctctagagaagatattgcagat
gtggtagaatacatcagatcccatggtattctccaaggacctccaggacctccaggtcca
cctggatacagccgattgtttggcccccatggaaatgccacagatctcattgaatacatc
aaatctcatggtctgctgcgtgatattgagcggaactccaatgatcgtgtcatccaagga
ccacggggaccacctggccctccaggtccccccggatacagccgattgtttggttctgac
acaaacgtcacagatttagtagaatacatcagagcacatggagccattgtaggaccacct
gggaggccaggacagaaaggagacataggatacccagggccaaaaggagagaaaggtgaa
cgaggtcttcctggacctgaaggacgtagaagacaagacggtggcagaggtcagttcata
tga
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