Cheilinus undulatus (humphead wrasse): 121508716
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Entry
121508716 CDS
T07473
Symbol
lmo7b
Name
(RefSeq) LIM domain only protein 7b isoform X1
KO
K06084
F-box protein 20
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121508716 (lmo7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cud04121
]
121508716 (lmo7b)
Ubiquitin system [BR:
cud04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
121508716 (lmo7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
121508716
NCBI-ProteinID:
XP_041641681
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All DBs
Position
1:complement(40477812..40522185)
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AA seq
1264 aa
AA seq
DB search
MEWRQQTSVSCADAFTEAQRWIEEVTGKPFGCNDFRAALENGVLLCDLINQLKPGIIKRV
NRLSTPIAGLDNVSVFLKACGKLGLNVSQLFHPGDLQDLSTRATLKRDESNRRLKNVLIT
IFWLGRKAHLDAFYSGPQLNFKAFEGLLGLALSKALDEGGNVFVKDSWDQEKEYLGKGPS
YKMENSLDSIDSVDSQALRPNSEGCGSDAEAEQVFKMEMAQHSTHQSKGYVPPPHLQKQG
QEQNGALARSKSLTDIPMVYPVRKVPDRHTMFNSLDKDAGMAQDWNQENKRKCSEAAKDS
EEQWQDDLTKWKNRRRSTKSDSYRKSQDREHVISQMVNGVGTTFDRNGAQGGLLKRDQQS
LRRHYPGPSPYPAPSPYSSSSPSKSSSLDLKPRRQALLTRSYATETPYSPTSPLNTHIST
HSLGSSVGSMPASDAIILGEETPIASLASNGAGVTTPSPDCPFSSQTPIRAQGCLDPSQP
TSETTQSENILTNQISTLITTLQPSNTTGPTCSRITSCIDPEAQTLCSKAVDPSDDLSYQ
NHKSQEDTQKTLYDPAVEQSQGLQAAGNYKYFPRAGSWSGSASLPRGYRRSEGSSRLSSA
ITARPFGSKQSRVSSLPRLCNVDSHQGLLLKCEKEEYLSPPAESFLKRQTATIHLKAPFQ
KEHQGQHNGTDQGKEVKGAILPSQTSFQTNGYHQQPSSQVQLLPTPYSNQQAHHNKTSSL
TTNASTDFSKVDHSDMRVSLTLKPNSVPDFGFQTHRDSRGVRVKFIQPGSPAELCQLCVD
DEIVAVNGVAVAYMNYTQWKDKMTSSLQTGSLTMDIRRYGNKDWSTRERSRHNQPGHSRM
TLNLTSAAPVLIGCPDHHANSGASSDTTVKVSKINGQTDDVMQGKVMNGELADNYRTART
KGGSESAISDLQVPSLSPSSSSWSWDHEEDRRRQEKWQEEQERLLQEQYQRDQERLEAEW
QRAQRDAMGQQSTVATEMSKGSKSSPNTVLHVNGLTNKTREEEQSPRKHELEETGSNTQC
DAEGVQKEKINEQGWAEDSCGFAQLSPAHRAKSLSTPSLAGTHKQPKGEQRKSLGHSVSQ
VEKERQQILEEMKKRTQLLTDNSWIRQRSSSFYKEPIYLGVPLKRYESLDNLNTFRQSPV
SSTPFSYPRPHSAAAGYCAPTRNSSSRYSTGSTLFQRNMAMEPYHHSRISGRRTCSVCER
LLGSGAAMVIETLSLCFHLACFQCVGCQQHLGGSETGVQVRVRNRKPYCEPCYFQLKSPS
APSM
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atggagtggcgccagcagaccagtgtcagctgtgcagacgccttcaccgaggctcagcgc
tggattgaggaagtgactggaaaaccatttggctgtaatgatttccgtgctgccttggag
aatggggtcttgctttgcgacttgattaatcagctgaaacctggaatcattaagagggtg
aacagactttctactcccattgctggtctggataatgtcagtgtcttcctgaaagcttgt
ggaaagctcggactgaacgtctctcagctgtttcatcctggagacctgcaggacctgtca
actcgagcgacactcaagcgagatgaaagcaacagaagactcaaaaatgtcctgataaca
atcttctggttgggtcgtaaagctcacttggacgctttctatagcggccctcagcttaac
ttcaaggcctttgaagggctgttagggctggccttgtccaaggctctggatgagggcggt
aatgtgtttgtgaaagacagctgggaccaggagaaggagtacctgggtaaggggccgagc
tataagatggagaattctttagacagcatcgactctgtggactctcaggccctccgtcca
aacagtgagggctgtggaagtgacgcagaagctgagcaggtgttcaagatggagatggca
cagcactcgacccaccagagcaagggttatgtccccccaccacacctacagaaacaaggg
caggagcagaacggagcccttgcaaggagcaaatcactgactgacatcccaatggtgtac
cctgtgaggaaagttccagacaggcacactatgtttaactctctggacaaggatgctggc
atggcacaagactggaatcaagaaaacaaacgcaagtgtagcgaggctgccaaggacagt
gaagagcagtggcaggatgacctgacaaagtggaagaaccgtcgcaggagcaccaagtct
gactcctatagaaagtcccaggacagagagcatgtcataagccagatggttaatggggtt
ggaactacttttgacagaaatggagcacaaggcggactgctgaagagagaccaacagtca
ctgcgcaggcattaccctggccccagtccttaccctgcccctagtccttactcctcctct
tctccatcaaaatcatcaagtcttgatctgaagccacgtaggcaagctctgctgacccgc
agctacgccactgagacaccttacagccccacaagtcctctgaacacccacatctcaacc
cactctctggggtcctcagttggatccatgcctgcttctgatgcgatcatcctgggagag
gagacccctatcgcctccctggcctcaaatggagcaggagttaccacaccttctccagac
tgtcccttcagctcccagacccccatcagagcccagggctgcctggatccttcccagccc
acatctgaaacaacccagtcagaaaacatcctcacaaaccaaatctccaccttgatcaca
actttacagccaagcaataccacagggccaacctgctccaggattacatcctgcattgat
ccagaagctcaaactctttgctcaaaagcggtcgatccttccgatgacctgtcatatcag
aaccacaagtcccaggaggatacccagaagacactttatgacccagctgtggagcaaagc
caaggcctgcaggctgcaggaaactacaagtactttcctagagctggatcttggtctggc
tcagccagcctgcctcgtggatacaggaggtccgagggttcatcccgtctctcatctgca
atcacagcaagaccctttggaagcaaacagtcaagggtgtcctcactgccaagactgtgc
aatgtagacagccaccagggtctgctgttgaaatgtgagaaagaggaatatctttctcca
ccagctgaatcttttctcaaaaggcagactgcgaccattcatctgaaggctccgttccag
aaagagcatcagggacagcataatggtacagatcaggggaaggaggtaaaaggtgccatt
ttaccaagtcagacctccttccagaccaacggctatcaccaacagccctctagccaagtc
cagctcctaccgacaccttattcaaaccagcaggcccaccacaacaaaacatccagcctc
actactaatgcaagtactgacttctcaaaggtggatcacagtgacatgagagtgagcctt
acactcaaacccaacagtgtaccagactttggtttccagacgcaccgggactccagaggg
gtgagagtcaaattcatccaaccaggcagcccagcagagctgtgccagctgtgtgtggac
gatgagattgtggctgttaatggggttgcagtggcatacatgaactatacccagtggaag
gataaaatgacgtcctccctgcaaactggcagtctgaccatggacatccggcgctatggc
aacaaggattggagcaccagagagagaagtcgtcacaaccagccgggccatagcaggatg
accctcaatttgacttccgcagcacccgttctgataggttgtcccgatcaccatgccaac
agtggtgcttcttcagacaccacagtgaaagtgtcaaaaatcaatgggcagactgacgat
gttatgcagggtaaagtcatgaacggagagctcgcagacaactacaggacagccagaact
aaaggaggttcagaatctgcaatatctgatctccaggtgccatccctcagcccctcctcc
tccagctggtcatgggaccacgaagaggatcgaaggcgtcaggagaagtggcaggaagaa
caggagcgcctcctacaggagcagtaccagcgggatcaggagaggctggaggctgagtgg
cagagagctcaacgagatgcaatggggcagcagagtactgttgctactgagatgagcaaa
ggtagcaagagctctcccaacactgtgctccatgtaaacgggctgacaaataaaacaaga
gaagaagagcaaagccccaggaaacatgagctggaagaaacaggatcaaacactcaatgt
gatgcagaaggagtgcagaaggagaagattaatgaacaaggctgggctgaagactcatgc
ggctttgctcagctgtcgcctgcacacagggctaagtccttgtctactccttcattagcc
ggcactcacaaacagcccaaaggtgaacagaggaaaagcctaggccactctgtgtctcag
gtggagaaagagaggcagcagattctggaggagatgaagaaaaggactcagcttctgacc
gacaacagctggatacgtcagcgcagcagcagcttttacaaggagcccatctatctgggg
gttcctctgaagaggtacgagtctctggataacctgaacactttccgccagtcgccagtt
tcaagcactccattcagctatcctcgtccacactcggctgcagctggttactgtgctccc
accaggaactcatcctcccgctacagcactgggagtaccctattccagagaaatatggcc
atggagccctaccatcacagcaggatcagtggcaggaggacctgcagtgtctgtgagcgt
ctcctgggtagtggggcagccatggtcatagagacccttagcctctgcttccacctcgcc
tgtttccagtgtgtgggctgccagcaacacctcggaggaagtgagactggagtccaggtt
cgagtccgaaacaggaagccctactgtgagccctgctattttcaactcaagtccccttct
gccccgtccatgtaa
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