Cheilinus undulatus (humphead wrasse): 121509018
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Entry
121509018 CDS
T07473
Symbol
smarca5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121509018 (smarca5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121509018 (smarca5)
03036 Chromosome and associated proteins [BR:
cud03036
]
121509018 (smarca5)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
121509018 (smarca5)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
121509018 (smarca5)
RSF complex
121509018 (smarca5)
WICH complex
121509018 (smarca5)
B-WICH complex
121509018 (smarca5)
NORC complex
121509018 (smarca5)
BRF complex
121509018 (smarca5)
NuRF complex (fruit fly)
121509018 (smarca5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Myb_DNA-binding
AAA_14
Motif
Other DBs
NCBI-GeneID:
121509018
NCBI-ProteinID:
XP_041642134
LinkDB
All DBs
Position
LG4
Genome browser
AA seq
1036 aa
AA seq
DB search
MMSESENCVEQREEQTELEEAGGAEEKSDSSDAGKESSSDAGPDGQDASSSSSSKTKESA
PGYEEKVQTDRTNRFEYLLKQTELFAHFIQPAAQKTPTSPLKMKPGRPRIKKDEKQNLLS
AGDNRHRRTEQEEDEELLNESTKTTNVCTRFDDSPSYVKTGKMRDYQVRGLNWLISLYEN
GINGILADEMGLGKTLQTIALLGYMKHYRNIPGPHMVLVPKSTLYNWMNEFKRWVPSLRA
VCLIGDRDQRTALIRDVLLPGEWDVCVTSYEMLIIEKAVFKKFNWRYLVIDEAHRIKNEK
SKLSEIVREFKTTNRLLLTGTPLQNNLHELWALLNFLLPDVFNSSEDFDSWFDTNNCLGD
QKLVERLHTVLRPFLLRRIKADVEKTLLPKKEIKMYVGLSKMQREWYTKILMKDIDILNS
AGKMDKMRLLNVLMQLRKCCNHPYLFDGAEPGPPYTTDLHLVVNSGKMAVLDKLLPKMKE
QGSRVLIFSQMTRMLDILEDYCMWRNYGYCRLDGQTPHEERQISINAYNEPNSSKFIFML
STRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQQKQVRVFRFITENTVEERI
VERAEIKLRLDSIVIQQGRLVDPSASKLGKDEMLSIIRHGATHVFASKESEITDDDIDAI
LERGERKTMEMKEKLSSLGESSLRNFTMDTENSSVYTFEGEDYREKKKVITNWIEPPKRE
RKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPPRLFELLEKEILFYRKTIG
YKVPRNPDMPNSAQVQKEEQAKIDEAEALTEEELEEKENLLQQGFTIWNKRDFNQFIKAN
EKWGRDDIENIAREVEGKTPEEVMEYSAVFWERCNELQDIEKIMAQIERGEARIQRRISI
KKALDSKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICMLHKLGFDKESVYDELRQCI
RNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEREKAEKKKRGPKTGSAQKRK
SEGTPDGRGRKKKLKL
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgaaagcgaaaactgcgtggaacagcgggaagagcagactgaacttgaagaa
gcaggaggagcggaggaaaagtctgattcctctgatgctggaaaagagtcgtcttcagat
gccggacctgatgggcaagatgcatcctcctcctcctcatccaaaactaaagaatcagct
cctggctatgaggagaaagtgcaaacagacaggaccaacagatttgagtacttactgaag
caaacagagttgtttgctcactttatccaaccagcggcacagaagacccccacctcaccc
ctaaagatgaagccagggcgccctcgcatcaagaaggacgagaaacaaaatctgctgtca
gctggagacaaccgccatcgtcgcacagagcaggaggaggatgaagagcttctgaatgag
agcacaaagacaactaatgtctgcacgcgctttgatgactctccctcctatgtcaaaaca
ggaaaaatgagggactaccaggtccggggtctgaactggctcatctctttgtatgaaaac
ggcatcaatggcatcctggctgatgagatgggtctggggaagactcttcaaaccatcgcc
ctgttagggtacatgaagcactacagaaacatccccggaccccacatggtgttggtacct
aagtccaccctctacaactggatgaacgagttcaaaagatgggtgccctcactgcgagca
gtctgcctgataggagacagggatcagaggacagccctgatcagagacgtgctgctacct
ggagagtgggatgtgtgcgtcacatcctacgagatgctcatcattgagaaggccgtgttc
aagaagttcaactggaggtacctagtcattgacgaggcccacaggatcaagaatgagaaa
tctaagctgtcagaaattgttcgagaatttaagaccaccaatcgtttgttgctgactgga
actccactgcaaaacaacctgcatgagctgtgggctctgctgaacttcctgctgcctgac
gtgttcaattcttcagaggactttgattcctggttcgacacaaacaactgtttgggtgat
cagaagttggtggaacgtcttcacactgttctgcgtcctttcttgctccgtcgtatcaaa
gctgatgtagaaaaaactctgcttccaaaaaaagagatcaagatgtacgtgggcctcagt
aagatgcagcgagagtggtacactaagattctgatgaaggacattgacatcctgaactca
gcgggtaagatggacaagatgcgtctgctgaacgttctcatgcagctgagaaaatgctgc
aatcacccgtacctgtttgacggagctgagcccggtccgccgtacactaccgacctccac
ctggtggtcaacagcggaaagatggcggtcctggacaagctgctgcccaaaatgaaggag
cagggttctcgtgtgctcatcttcagtcagatgaccaggatgctggacatcttggaggat
tactgcatgtggaggaactacggctactgtcgcctggatggccagacgccacacgaggaa
agacagatctctatcaacgcatacaatgagccaaacagctctaaattcatcttcatgttg
agcaccagagctggaggtctgggtatcaacctggctactgcagatgtggtcatcctgtac
gactcggactggaaccctcaagtcgaccttcaggccatggaccgagctcacagaatcggt
cagcagaagcaggtacgtgtcttccgtttcatcactgaaaacacggtggaggagaggatc
gtggagagggccgagatcaaactgcgactcgactctattgtcatccagcaaggaagactg
gtggatccaagtgcgagcaaactgggcaaggatgagatgctgtcgatcatccgccacggt
gccacacacgtgttcgcttccaaagagagcgagatcacggacgacgacatcgacgccatc
ctggagagaggtgaaaggaagactatggagatgaaggagaagctgtcttcacttggtgag
agctctctgagaaacttcaccatggacacagagaacagcagcgtgtacacgtttgaagga
gaggattacagagagaagaaaaaggtcatcaccaactggatcgagccccccaagagagaa
aggaaagccaactacgctgtggatgcctacttcagagaagctctgcgagtcagcgagccc
aaagcacccaaggctcctcgtcctcccaaacagccaaatgtccaggacttccagttcttc
cctcctcgtctttttgagcttctagaaaaggaaattctcttctacaggaagactataggc
tacaaggttccccgtaatccagacatgccaaactcagcccaggttcagaaagaggagcag
gcgaagattgatgaggcggaagctcttacagaggaagaactagaggagaaggagaacctg
ctccaacaggggtttaccatctggaacaaacgagacttcaaccagttcatcaaagccaat
gagaagtggggtagagatgacatcgagaacatcgccagagaggttgaggggaaaactcca
gaggaagtcatggaatattctgctgtgttctgggagcgctgcaatgagctgcaggatatc
gagaagatcatggctcagatcgagagaggagaggcccgaatccagaggaggataagcatc
aagaaagcacttgactcaaagattggccgctacaaggctcccttccatcagctccgcatt
tcctatggtaccaacaaaggcaagaactacacagaggaggaggaccgcttcctcatatgt
atgcttcacaagctgggcttcgataaggagagcgtgtacgacgagctgcgtcaatgcatc
cgcaactcgccgcagttccgcttcgactggttcctcaaatccaggactgccatggagctc
cagaggcgatgcaacaccctgatcacgctgatagagagagagaacatggagctggaggag
agggagaaggctgagaagaagaaacggggcccaaaaactggctcggcccagaaacgaaag
tcagaaggaaccccagacggtcgtggacggaagaagaagctcaagttgtga
DBGET
integrated database retrieval system
