Cheilinus undulatus (humphead wrasse): 121509316
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Entry
121509316 CDS
T07473
Symbol
ercc8
Name
(RefSeq) DNA excision repair protein ERCC-8
KO
K10570
DNA excision repair protein ERCC-8
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03420
Nucleotide excision repair
cud04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121509316 (ercc8)
09124 Replication and repair
03420 Nucleotide excision repair
121509316 (ercc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cud04121
]
121509316 (ercc8)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121509316 (ercc8)
Ubiquitin system [BR:
cud04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121509316 (ercc8)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
121509316 (ercc8)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_SPT8
WD40_RFWD3
WD_LRWD1
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
121509316
NCBI-ProteinID:
XP_041642518
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Position
5:complement(35964470..35989326)
Genome browser
AA seq
401 aa
AA seq
DB search
MLGFLTARQAGLDDPLRLRRTESTRRVLNLQLNPDRDVDRIHGNGINTIDIDAVEGRYML
SGGADGVIVIYDLENYSGKQQYTCKAVCTVGRSNRHVHKFSVETVQWYPYDTGMFVSSSF
DKTMKVWDTETLKPAEVFDFEDNVYSHHLSPIARKHSLIAVGTKNPKIQLCDLKSGSRIH
VLQGHRAEVLSVRWSPRYEHILASASADSKVKVWDVRRASGSLFTLDQHNGDKSKASSEA
VNTAHNGRANGLCFSGDGLYLLTTGTDDRMRLWNSATGENTLVNYGKVCNESRKRLQFTV
SRGCSPEFVFVPCGSSIAVYTLHTGELVTMLRGHYNNVDCCEYHPDYQELYSGGKDCNIL
AWVPVLRVSDVEEEPESTNKSAAGSSSVNPAFQDAWSSDED
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgctgggatttttgacggccagacaggctggactggatgaccctctgcgactgagacga
acagagtctacaagaagggtcctcaacctgcagctgaatcctgacagagatgtggacaga
atccatggaaatggcatcaacaccattgacattgacgcagtagagggcagatacatgttg
tctggtggagcagatggcgtgattgtcatctatgacctggagaactacagcgggaaacag
cagtacacttgcaaggcagtttgcacagtgggcaggtcgaatcgacatgtccacaaattc
agcgttgagaccgtccagtggtatccttacgacacaggcatgtttgtctccagttccttt
gacaagaccatgaaagtttgggacacagaaacactgaagcctgctgaagtctttgatttt
gaggacaacgtctacagccaccacctctcccccatcgccagaaagcacagtctcattgca
gttggcaccaaaaaccctaaaatccagctgtgtgacctgaaatctggctcacggattcat
gttcttcaaggtcacagagcagaggtgctgtctgtgcggtggtcacctagatatgagcac
attttagcgtctgccagtgcagacagcaaagtgaaagtgtgggacgtgcgtcgggcctct
ggcagtctcttcacactggaccagcacaatggagacaagtcaaaagcctcctctgaggca
gtgaacacagctcacaatggccgagcgaatggcctgtgcttcagcggagacggcctttac
ctcctcacaacaggcactgatgacaggatgcgactgtggaatagcgccaccggggagaac
acactggtgaactacggaaaggtctgcaatgagagtcgtaaaaggcttcagttcacagtg
tcccgtggttgcagcccagagtttgtctttgtgccatgcggcagctcaattgccgtgtac
accctccacacaggagagctggtcaccatgctcagaggccactacaacaatgtcgactgc
tgcgagtaccacccagattaccaggagctgtacagcggaggtaaagactgtaacatcctg
gcgtgggtgcctgtccttcgtgtctcagatgtggaagaagagccagagagtacaaataag
agtgctgctggcagctcctcagtgaaccctgcctttcaggatgcatggagcagtgatgaa
gattaa
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