Cheilinus undulatus (humphead wrasse): 121509328
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Entry
121509328 CDS
T07473
Symbol
tnc
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04510
Focal adhesion
cud04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121509328 (tnc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121509328 (tnc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cud00536
]
121509328 (tnc)
Glycosaminoglycan binding proteins [BR:
cud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121509328 (tnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
Pur_ac_phosph_N
EGF
FN3_Tor_3rd
NDNF
fn3_2
hEGF
NDNF_C
Motif
Other DBs
NCBI-GeneID:
121509328
NCBI-ProteinID:
XP_041642539
LinkDB
All DBs
Position
5:complement(50887125..50978191)
Genome browser
AA seq
1692 aa
AA seq
DB search
MWMKGLLLVCLTSLLLELSSAGLVKKIIRHRREALIPKKTQENLTLPNPDQPVVFNHVYN
INVPSSSLCSVDLDSPGGTELKHKSAPMGMQNTEHIENTEDGENQIVFTHRISIPKQACG
CDNQLPDIKDILNRLEMLESELSSLREQCSSGSGCCGAPVTGEVSTKPFCNGRGNWSTDT
CSCVCEPGWKGPNCTEPECPNDCQDQGRCVDGKCECFDGFGGDDCGIELCLLDCGDYGHC
VDGSCLCEDGFLGEDCTQTNCLNNCLGRGRCVDDECVCDEPWTGFDCSELICPNDCYDRG
RCVNGTCYCDEGFTGEDCGEITCPGNCNNRGMCVNGLCVCQTGYSGEDCSKLTCPNNCNE
RGHCFNGKCICDPGFEGDDCSILSCPDNCSNRGQCINGECVCDVGYQGEDCSELSCPNNC
QGRGRCVNGQCVCDRGYAGEDCSIKTCPKDCMGRGECVDGKCICFVGFTGKDCGELTCPN
DCLDRGHCVNGQCVCHKGFTGEDCSEKTCPKNCLDRGYCVDGKCVCYEGFTGPDCSLLTC
PDDCHNQGRCENGVCVCDEGFIGEDCSGVSPPKDLTVVEVNPETVDLSWENEMRVTEYLI
TYVPTAPGGLELDMQVSGDQKKATIRELEPGVEYLISVYAVLNNKRSIPVSARVATHLPE
PEGLKFKSVRETSVEVQWDPLDISFDGWNLIFRNTKEEDGEILNSLGRPETTFEQSGLGP
GQEYEVKLQVVKNNKLGKPASKNVITRIDAPSQVNVRDVTDTTALVTWFQPVAEVDGVSV
AYGPSSNPADRNIVELSSTDTQYHLGGLNPDTQYEVSLTARRGERTSTPVYESFLTDLDA
PTDLQTVELTDESITLEWKNSQAHVENYRIKYGPLSGGEHGELLFPPGPRDITQAKITGL
RPGTEYGMGVTAVKDERESLPTTTNAVTALDAPKDLTVAEVTETTMMLEWKRPLAKLDSY
RLVYVSADGHRDEEVVPGSSESHTLRSLTPGMLYTISITAERGRRTSAPTSISAPTEEEK
PVVTNVTVSDVSWDSFLLTWSAEDGAFEAFLIEVTDAETGAEWQNHTVPASARSLAVSGL
FPTTWYRANLYGQYRGALLDPVFADTITEAEPLVQALLVSDITPDSFRLSWTAEEDAFDT
FVIMVSETEGPGQPRELVLGGEERSTAVTDLSEDTEYRVEIFGLILGKRSKSVMEQVRTD
LGPPKGIRFSDVTDTSATVHWVVPRARVDSYRVTYVPAHGGTAKTLTVDGSESQTVLPNL
TPGVTYEVTVVAVKGQRESEPGSDSVTTALDKPRGLTAVNITDTEALLLWQPAIATVDGY
VITYSADSVAPVMERVSGNVVEFEMSSLTPATFYTVKVYAVRDLAKSAATTTVFTTDVDA
PQDLAASNIQTESGLLTWKPPRADITGYILSFESAEGTVREVVLSPTAVSYNMAQLSAST
EYSVKLQAIAGPKRSRVITTVFTTTGVLYRHPKDCSQALLNGDTTSDVYTIYVGGDESQP
IQVYCDMTTDGGGWIVFLRRQSGKLEFFRNWKNYTAGFGDMNDEFWLGLSNLHKITAGGQ
YELRVDLRDKGETAYAQYDKFSVSEPRTRYKVHVGGYSGTAGDSMTYHHGRPFSTYDHDN
DIAVTNCALSYKGAFWYKNCHRVNLMGRYGDNSHSKGVNWFHWKGHEHSIEFAEMKIRPS
NFRNLEGRRKRS
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgaaaggcttgctcctagtctgcctgacctccctgctcctcgagctctccagt
gctggtctggtaaaaaagatcatccgccaccgtagagaggctctgatacccaagaagacg
caggagaacctcaccctgcccaacccggaccagccagtagtattcaaccacgtctataac
atcaacgtgccctcctcatccctctgctccgtggacctcgactcccccggaggcactgag
ctcaaacacaagagcgctccgatgggcatgcagaacaccgagcacatcgaaaacacggag
gatggagagaatcagattgttttcacacaccggatcagtattcccaagcaggcttgtgga
tgtgacaaccagcttccagacatcaaggatatcttgaacaggctggagatgctggagtct
gagctgtctagtctgagagagcagtgcagcagtggctctggctgctgcggggctccagtt
acaggtgaagtctccactaaaccattctgtaacggccgtgggaactggagcactgacacc
tgcagctgtgtttgtgagcctggatggaagggccccaactgcactgaacccgaatgcccc
aacgactgccaggaccagggccgctgtgtcgacggtaagtgtgagtgcttcgatggcttc
ggtggggacgactgcggcatcgagctctgcctgctggactgtggcgactatggccactgt
gttgatgggtcgtgtctctgtgaggacggcttccttggtgaagactgcacccagaccaac
tgcctcaacaactgcctaggccgcggccgctgcgtggatgacgagtgcgtctgtgacgag
ccttggacaggtttcgactgctccgagctcatctgtccaaacgattgctatgaccgaggg
cgctgtgtcaacggaacctgctactgtgacgaaggcttcactggtgaagactgtggagag
attacctgtcctggcaactgtaacaaccgcggcatgtgtgtgaatggcctgtgtgtgtgt
caaaccggctacagtggagaggactgctcaaaactcacttgtcccaacaactgcaatgag
aggggtcattgcttcaatggaaagtgcatctgcgatccaggatttgagggtgatgattgc
tccatactctcttgccctgacaactgcagcaacaggggccagtgcataaatggagaatgt
gtatgcgatgtaggataccaaggtgaagactgcagcgagctctcctgccccaacaactgc
caaggtcgcggccgctgtgtaaacggacagtgcgtatgtgaccgaggctatgccggggag
gactgtagcatcaagacctgtccaaaagactgcatgggacgtggagagtgtgtggatggc
aaatgcatttgcttcgttggtttcactgggaaagactgtggagagctgacctgtcccaat
gactgcttggaccgtggtcactgtgtgaatgggcagtgtgtttgccataagggtttcact
ggtgaggactgcagtgagaagacgtgtcccaagaactgtctagacagaggttactgtgtc
gatggtaaatgtgtttgctatgagggtttcaccgggccggactgctccctactgacctgc
ccagatgactgccacaaccagggccgctgtgaaaatggggtgtgtgtgtgcgatgaagga
ttcattggagaggactgctctggagtctcacctccaaaggatctaacagtggtggaagta
aatccagagactgtcgacctgtcctgggagaatgagatgcgcgtgacagagtatctgatc
acctacgtgcccacggcccctggaggtctggagctggacatgcaggtgtctggggaccag
aagaaggccactattcgagagcttgagcctggtgtggagtacctgatcagtgtctatgct
gtgctaaacaacaagaggagcattcctgtcagtgccagggtggctacacatctgcctgag
cccgagggactcaagtttaagtccgtgcgagagacatcagttgaagtgcaatgggaccca
ttggacatttcctttgatggctggaacctcatcttcagaaacacgaaagaggaggatggt
gagattcttaactccttgggccgtccagagaccacctttgagcagtcgggcctgggccct
ggccaggagtacgaggtcaaactgcaggtggtgaagaataacaagcttggaaagcctgcc
tccaaaaacgtcatcacaaggatcgatgcccccagccaggtgaacgtgcgtgatgtgact
gacaccacggcgctggtgacatggttccagcctgtggctgaggtggacggggtcagcgtt
gcatatggtcccagctctaaccctgctgatcgtaacatagtggaactgtcatctactgac
acccagtaccacctgggtggccttaaccccgacacccagtatgaggtgtctctgaccgct
cgtagaggagaacggaccagcactcccgtctatgagtcattcctcacagaccttgatgcc
cccacggacctgcagacagtggagctgacagatgagagcatcaccctggagtggaagaac
agccaggctcacgtagaaaactaccgcattaaatacggccctctgtctggaggcgaacat
ggagagctgctgttcccaccaggaccaagggacatcacccaggccaagatcacaggtctg
aggccgggaacagagtatggcatgggtgtgacagcagtgaaggatgagcgagagagtctt
ccgacaaccaccaacgcagtgacagcgctggatgctcccaaggacctgactgttgcagag
gtgacagagaccaccatgatgttggagtggaagcgccccctagccaaactggactcctac
agattggtttatgtgtcagctgacggccacagggatgaggaagtggtccctggcagttct
gagtctcacactttgaggagccttacacccggcatgttgtacaccattagcatcactgct
gagaggggccgcaggaccagtgcacccacctcaatctcagcccccacagaggaggagaag
cctgtggtgaccaatgtcacagtcagcgatgtatcgtgggatagcttcctcctgacttgg
tctgctgaggacggggctttcgaagcctttttgatcgaggttactgatgcagagacgggt
gctgagtggcaaaaccacacagtgcccgccagcgctcgcagccttgccgtctctggcctc
ttccccaccacctggtacagggccaatctgtacgggcagtacaggggggccctcttagac
cctgtgtttgcagacaccatcacagaggctgaaccattggtgcaggctctcctagtctcc
gacatcaccccggacagctttaggctgtcttggacggctgaagaggacgcctttgacact
tttgtcataatggtcagcgagaccgagggcccaggccaaccgagagagctggtgctgggt
ggggaggagcgaagcacagctgtcacagatctcagcgaggacacggagtacagagtggag
atctttgggctcattttggggaaacgctccaagtctgtaatggagcaggtcagaacagac
ctcggcccgcctaaaggcatccgcttctctgatgtcacggacacatctgccaccgtgcac
tgggtggtgccacgagcccgggtggacagctacagggtcacctatgtgcctgctcatgga
ggtactgcaaagacactaacagtagatggctctgagtctcagactgtgctgcccaacctg
acccctggggtcacctatgaggtcaccgtggttgctgttaaaggtcagagggagagtgag
cctggatcggacagcgtcaccacagctctggataagccccgcggtctgactgcagtaaac
atcaccgacacggaagctctgctgctgtggcagcctgccatcgctacagtggacggatat
gtcatcacgtacagcgccgactcagtggctccagtgatggagcgtgtctcaggaaacgtg
gtggagtttgaaatgagctctctgacccctgcaaccttctacacagttaaagtctatgct
gtgagggacttggccaagagtgcagccactacaactgtgttcaccactgatgtggacgcc
ccacaggacctggcagccagtaacatccagactgagagcggtctgctgacttggaagcct
cctcgcgctgacatcacgggctacatactcagctttgagtctgcagaaggcacagtccgg
gaggtggtcctgagtcctactgcagtctcctataacatggcccagctcagcgcatccaca
gagtactctgtcaagctgcaggctattgctggtccaaagagaagccgagtcatcacgact
gttttcactaccactggtgtactctacagacatcctaaagactgttctcaggccctgctg
aatggtgacaccacgtctgatgtgtataccatctatgtgggtggagatgagagccagccc
attcaggtgtactgtgacatgaccacggatggaggtggatggatcgttttcctcagacgt
cagagtgggaaattggagtttttccgcaactggaagaattacactgctggctttggtgac
atgaatgatgagttctggctgggtctgtccaaccttcataagataacagctggaggccag
tatgagctgcgggtcgacctcagagataagggagaaacagcttacgctcagtatgacaaa
ttctctgtgtctgaaccacgaacacgctacaaggtccatgtaggaggatacagcggaaca
gcaggcgactcaatgacctaccatcatggccgtccattctccacctacgaccacgacaac
gacatcgctgtcaccaactgtgccctgtcctacaagggagctttctggtataaaaactgc
caccgtgtcaatctcatgggacgatatggagataacagtcacagcaagggtgtgaactgg
ttccactggaaaggccacgagcattcaatcgagtttgctgagatgaagatcaggccatcc
aacttcagaaacctggaaggcagaaggaaacgatcataa
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