Cheilinus undulatus (humphead wrasse): 121509422
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Entry
121509422 CDS
T07473
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121509422 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cud03021
]
121509422 (smarca2)
03036 Chromosome and associated proteins [BR:
cud03036
]
121509422 (smarca2)
Transcription machinery [BR:
cud03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
121509422 (smarca2)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
121509422 (smarca2)
Chromatin remodeling factors
BAF complex
121509422 (smarca2)
PBAF complex
121509422 (smarca2)
GBAF(ncBAF) complex
121509422 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
121509422
NCBI-ProteinID:
XP_041642728
LinkDB
All DBs
Position
LG5
Genome browser
AA seq
1588 aa
AA seq
DB search
MSTPSDPAGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAHHSM
QGQGQSDYSQDAMYPMHKTMEGMNDKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMSVHEHSSSPMSGGGGGGGPTPPHMPSSQSGPIMSMDPQGGMPNMSQQGR
GHSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQHQHQQQQQQQ
QQQTPGASPYNRPPGMPMAPIGGPQSSPCPTPAMQGHSQSTGPKPWPDGQGGENQANIQK
HLTSVASGRPSPAPPQASAVPPAPMPGSSVTPQPPGQQVSPMLQIQQKQNRFTPIQKPQG
LDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDV
VACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSIL
QHAKDFKEYHRSVSGKIQKLTRAIAAWHTNTEREQKKETERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTALVYEHKAAQAAKEKKRRKKKKKKVDGDGEGTSAI
GPDGEPMDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEE
SGSEYEEEEEEDVPKAESEEKKLIDPNGDEGTVMAAKHIIESAKQDVDDEYSVPTGQTSS
QSYYGVAHAVIERVEKQSSLLVNGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQ
TIALITYLMEYKRVNGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQL
RSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLL
LTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRL
HKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGK
GGAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGHDLYRASGKFELLDRIL
PKLQATNHRVLLFCQMTSLMTIMEDYFSFRNFQYLRLDGTTKSEDRAALLKKFNEEGSQI
FIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNS
VEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETL
NQMIARNEDEFELFMRMDMDRRREHARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEE
EEKMFGRGSRCRRDVDYSDALTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSR
DDGSSKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKE
LPEYYELIRKPVDFKKIKERVRNHKYRNVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVL
QSVFKSARQKIAKDEESEDDSDEEDDDEDESESEAKSVWVKIKLSKEGRSSDKGKRRQSR
GKAKPVVSDDDSDDDQDDNDQSDKSDDE
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccctcagaccctgcaggaggtatgtcccatcctggcccttctcctggggca
ggcctgtccccagggcccatcttgggccccagccctggaccggacccctcaccaggctct
gtccatagtatgatgggaccaagtcctggacctggaacccccaatgcacatcacagcatg
cagggccaggggcaaagtgattattctcaggacgcgatgtatcctatgcacaagacgatg
gaaggtatgaatgacaaaaccatggcagatgcaatgcactttggtcacatgaaaggtgtg
gggatgagatctctacatagtggaatggggcctccacagagccccatggaccagcacagc
caaggatacatgtccccccatccttcccctatgagtgttcatgagcacagttccagtccc
atgtcaggaggtggaggtggtgggggacccacaccaccccacatgccctcctcccagtca
ggccctattatgtccatggatccgcagggtggcatgcccaacatgagccagcaaggccga
gggcattctgctttcagtccagtccagcttcagcagctcagggctcagatcctggcctac
aagatcctagggcggggccagcctctgcctgaaaaccttcaactggctgttcaaggcaag
aggagtctgcccacaatgcaacagcagcaacatcagcatcagcaacagcagcagcagcag
cagcaacagacacctggtgccagcccttataacaggcctccaggtatgccaatggcaccc
ataggtggtcctcagtcaagtccctgccctacaccagccatgcaaggacacagtcagagc
acaggacccaagccatggcctgatggtcagggtggtgaaaatcaagccaacattcagaag
cacctcacctctgttgccagtggacgcccatcccctgctcctcctcaggcctctgctgtc
ccacctgcacccatgccaggcagttcagtgaccccccagcctcctgggcagcaggtgtcc
cccatgcttcagatacagcagaaacagaaccgctttacaccaatccagaagccccagggc
ttggaccctgtggggatcctgcaggagagggagtacagactgcaggctcggattgcccat
cgaatccaggaactggagagtttgccaggatctctgcctcctgacttgaggactaaagcc
acagtggagctcaaggcactgcgtctgctaaatttccagcgtcagttgagacaggatgtg
gtggcgtgtatgaggagagacacaaccctggagacagccctcaactcaaaggcttacagg
cgcagcaagcggcagacattgagggaagcccgtatgaccgagaagctggagaaacagcag
aagcttgagcaggagaagaagcgcagacagaaacatcaggaatatctcaacagcatcctt
cagcatgcaaaagacttcaaagagtaccaccgctcagtgtcaggtaaaatacagaaactc
accagagctattgccgcctggcacaccaacactgagcgagaacagaagaaggagactgag
aggatcgagaaggaaaggatgaggagactgatggcagaagatgaggaaggctaccgtaaa
ctgattgaccaaaagaaagacaagcgtctggcctacttgctgcagcagacagatgaatat
gtggccaaccttacagccctggtttatgaacacaaagctgcccaggcagccaaggagaag
aagcggaggaagaagaaaaagaagaaggtggatggagatggagaaggcaccagtgcgatt
ggacctgatggagagcccatggatgagagcagccaaatgagtgagcttccagtcaaagtg
atccagacagagactgggaaagtcctgcagggaacggatgctcctaaatccagccagctt
gaggcttggcttgagatgaaccctgggtatgaggttgccccacggtcagacagtgaagag
agtggctcagagtacgaggaagaggaggaagaggacgttccaaaggcagagtcagaggaa
aagaagttaatcgatcccaacggagacgaagggactgtgatggctgccaagcacatcatc
gagtcagccaagcaggatgtggatgatgagtacagcgttcctactggacagacaagctcc
cagtcttactatggtgtagcccatgctgtcatcgaacgggtggagaagcagtcatcactg
ctggtcaatggcacgctcaaacactaccagatccaggggttggagtggatggtgtccttg
tacaacaacaacctaaatggaatcctggctgatgaaatgggccttggcaaaacaatccaa
actatcgcccttatcacctatctgatggagtacaagagggtcaacggccccttcctcatc
attgttcctctctcgactttgtctaactgggtctatgaacttgacaagtgggcaccctct
gtggtgaaaatagcttacaagggtacccctgctttgcgccgggggctggtacctcaactt
cgcagtgggaagttcaatgtcttgctgaccacctatgaatacatcatcaaagacaagcac
atactggccaagattcgctggaaatacatgatcgtggatgaaggccaccgcatgaagaac
caccactgtaagctgacccaggtgttgaacacccactacgtagctcctcgccgcctcctc
ctcactggtactccactgcagaacaaactgcctgagttgtgggctctgctcaacttcctg
ctgcccaccatcttcaagagctgcagcacctttgagcagtggttcaacgctccatttgcc
atgacaggagagagggtcgacctaaatgaggaggagacaatcctgattatcagacgtttg
cacaaggtgcttcggcccttcctcctgcgcagactgaagaaagaggtggagtctcagctg
ccagagaaggtggagtatgtcattaaatgtgacatgtctgccatccagaaggttctgtac
cgccacatgcagaagggcattcttctcactgatggctcagagaaagacaagaaggggaaa
ggtggagcaaagaccctgatgaacaccatcatgcagctgaagaaaatctgcaaccaccca
tacatgttccagcacattgaagaatcttttgctgagcacttgggctatccgaatggcatc
atcagtggacatgatctgtatcgagcctctggaaagtttgagctcctggaccgcatcctg
ccaaaacttcaggctacaaatcacagagtcctccttttctgccaaatgacctctcttatg
acaatcatggaggactacttcagcttccgcaacttccagtacttgcgtcttgatggaaca
actaagtctgaagacagagcagctttgctgaagaaatttaatgaggaaggatctcagatt
ttcatcttcctgctcagtaccagagccggtgggctcggtctcaacctgcaggcagctgac
actgtcatcatctttgacagtgactggaatcctcaccaggaccttcaggctcaggatcgg
gctcatcgcattggccagcagaacgaggtgcgtgtgctccgtctctgcactgtcaacagc
gtggaggagaaaatcttggcagctgccaagtacaaactgaacgtggatcagaaggtcatc
caggcaggcatgttcgaccagaagtcctccagccatgagcgtcgtgccttcctgcaggcc
attttagagcatgaggagcagaatgaggaagaagatgaagtcccagatgatgagaccctg
aaccagatgattgcccgcaacgaagatgaatttgagcttttcatgcgtatggatatggac
cgccgtcgagagcacgcaaggaacccaaagcgaaagcctcgtctcatggaggaggatgag
ttgccctcttggatcattaaagatgatgcagaggtggaaaggctcacatatgaagaggag
gaggagaagatgtttgggagaggatcacgctgccgtcgggatgtggactacagtgatgcg
ttaactgaaaaacagtggctacgggccattgaagatggaaatctagaggagatggaggag
gagatccgtctgaaaaagcgcaaacgcaaaaggcgtcaggacaaggactcatcgagcaga
gacgatgggagctcaaaggccaagaagagacgaggacgtccaccagctgagaagctgtcc
cctaaccccccaaaactcaccaagcaaatgaacacaatcattgacacggtcatcaactac
agagatgggtcaggaagacaactaagtgaagtctttgtgcagttaccatccaggaaggag
ctcccagaatattatgaactcatcagaaaacctgtggacttcaaaaagatcaaggagcgt
gtgaggaaccacaaatacaggaatgttggagacctggaaaaggacgtgatgcttctttgc
cacaacgcgcagaccttcaacctggagggatcccagatatatgaggactccatcgtcctt
caatctgtattcaagagtgccaggcagaagatcgccaaggacgaagagagtgaagacgac
agcgatgaggaggatgatgacgaggatgagtctgagtcagaagccaagtcagtgtgggtt
aagatcaagctgagtaaggagggacgcagcagtgacaaagggaagaggaggcagagccga
gggaaagccaagccggtggtcagcgatgatgacagcgacgatgaccaggatgacaatgat
cagtcagacaagagcgatgacgagtga
DBGET
integrated database retrieval system
