Cheilinus undulatus (humphead wrasse): 121509857
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Entry
121509857 CDS
T07473
Symbol
vps13a
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121509857 (vps13a)
Membrane trafficking [BR:
cud04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
121509857 (vps13a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
DUF4770
Motif
Other DBs
NCBI-GeneID:
121509857
NCBI-ProteinID:
XP_041643524
LinkDB
All DBs
Position
5:complement(43202113..43274051)
Genome browser
AA seq
3277 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGDAVLTNLEIKENALSQLDIPFKVRAG
HIGRLELKIPWKNLYTQSVEATLDGVYLLIVPTASIKYDAEKEEKQLQEARQRELQRIEE
TKLKAAEKENPSLEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDVTNPNCPLSFGVSLK
NLSLQTSDENWNPSLLDENSRLFFKLVQLDSLFAYWNVNSTLFSNHSPDEALRCLQRSME
ISSSLSISHDFIFRPISADAKLRMNPRSDLDHSSPKVDLMVNLSEVAIELNRPQYISILE
LLGSVDMMSRNLPYRKYRPVVQVHKNAYIWWRYVITGILEVDVKPRLHMWSWDHIRCHRQ
KVKRYRELYKTKITSKKPSEELLKALEEPEKTLDIFNITLARQQAEVEASKAGLCIYRPG
VKMEEEESQGWLSWMWNWGGEPETEKKEVKTGGFDELLTPAEKAKLYTAIGYSETAANPN
LPKDFEDMKVNFHMERLTVSIKDNKDKNEIIKLTVGELMSTLTQRPGAQAIKLTAQLSLF
EVTGLASNRPAPTLLSSRKAATGDGTPLLCILFETNPLDESANQRLHVESQPLEIIYDAI
TVNSMSLFFMPPDDLQLDELTNATLMKLEQFRDRTATGLMYVIETQKVLDLKVNLMASYV
IIPQTGFYNGTQNILLLDLGHFQMSSQSKKHLPQLSVGSSNIEDIMLRAYDSFDVQLSSL
QFLYSKPDGDWKMARKQKRSPLHILEPVDLKVVFSRAMVVKDSRMAKYKMSGELPLLSLR
ISDVKLRSVLELVESIPLPESRPAHSSAPSTNTKPKSFTPQLTPRKPLNLADQRSSLIFE
SCETISITSLGSEEDLFYDAPSSPIGDKPFFPDNPMPLRYADLHKRKSLLKDDVQKNMTD
LILTFEISEFSVQLCRLSEDQEITVLHLDIEGLGTELKIRTFDMTSNTYLREICLKCPEY
MDSEEKQVQLITTLDNTEVDLLTLEYIKADKNGPEFKSQHNNTEQLIKVTFSSLDVHLHT
EALLNTMNFLSNLLPPSTKKEGGQEELPTIPEEEEAEAEKEEEKKEETAITRKKSTKSKK
FADVVNLHIRADLRCLKVFIRGQKARISEISIEGLVSEVLMRKKEMEVHANLKNIVILDC
DKDAFYKKAVSIADKEVFAFRMVNYTDATEGDAYLDMSKVDTFVTLTVGCIQVIFLNKFV
SSILAFINNFQEAKEALAEVTVQAAEKAASGVKELAERSTRIALNVHFNAPVIFLPQSSS
SSNVIVADLGLLSVKNCFAKQPCKSNTKIPPVVDKMAVKLTDLKMYRTKYINEGFQGETQ
LLKPVSLDLEIQRNLSSNWYHSIPDIEITAHLKPLSLILSQDDMTVVLRTLSENLSEKSD
AVPAAPPVPTTDHSSDSVSNKESQGSGTTGPASSNTVVTSAVVETQKSSRLKITLKLDFK
FDSMTLILYSPNENVIQLLDSHDEQLKLAEFTLGTISTSVHMFSDGSMKASVLLATCLLD
DKRPRIKMVTPRMMAMRPGAEQNMMVEVSYHQGRDGTTLDTLVQDVYLCASMEFLLTVAD
IFLKATQQGFTQVPQSKSSSGAGDKKNINSSVTSKESTAAPAVVSKTEMNVVVRNPEIVF
VADLTRADAPALVMTTECELVMKSDAEGSQMTAAIKDLKVVACPFLREKRRNNVTTVLQP
CQVFFQSTQTPTSPQAMEVSINALTLKVSPIIINTVITIQSALTPKAETPEELESPVPVD
LWEKRSWKELKLWFLDEEGDEDTASLAPLIPQGESLQLSIKLICLTLEAGVGHRTVPMLL
AKSSFHGDVKNWSTLINLHSELNLEVHYFNEVMGVWEPLLEPLEDETRDGFRPWRLELKM
KKKPLKSTEMLDELDYNIPDYKTVIVISSEDQLNITLSKCGLSMLSNLGTAFAEAAKQTA
DSFQKDEAPFVVKNRLGLPVSVRHSEMFSPIGQQSTNSTVQLEDGGTLGMDYTTTTDSDQ
FSAMISLSGKDYYIEPTPMGHTSASVIPLIKVGRGMYSVMHNESGVTRFLVCQIYSVEGS
KYIKIRSPFQIINHFTIPFKVFEGSTCLGTALPTEEFCVPLDSYRSELSLRPVTEDDVDS
KDEQFECSEGFSYEDVSNQQPEARLQQSCRRTGDQGGVMVVNIVPVKDAVTFKHTGEAGE
NFDVPFVLHLWPSILLRNLLPYPISYKLKDSGVSAPEATLDPGHSAQLHTAVINQTSLDL
RLLSYLAQDWSAQYRLHSDQEEITFIVFQSLRENDEDDGEGEDRKRAELDIAVHVKYDLG
QTVIAIHSPYWMVNKTGRLLQYKADDIHRKHPLDYDMPLLFSFKPRYFLKNNKVRLMISD
SELSDEFSLDTVGSHGDVKCKGRYKDYLVGVKIDASTFSLTRIVSFVPFYMLVNRTKHSI
FICEEGQENWTEAQPEQSAIPFWPENDTKLLKIKVDGCLLPPQRIDFTRPENCLLLHLDN
SVGGIIVDVNLSEHSATIRFSEYHDGAAPFLIINHTKDQTLHFHQSAKEETVWVPDSLLD
LSFSGEEESSQKEAEHEELEAGKAVHYTWTEPTGSRELCWRWGGYSGKLKSEEDMRQDMN
NEGKLFLISFYEGLQRVVLFTEEQRIYKLLCESEKAQLAEQEIILSLQNVGISLINNSTS
QEVSFIGITSSDVVWELKPKKKNRWKTLSTKEAEMLENKFKEYTESGRVDSDPIELENNY
QVVFTPNGVDMRMLEPCEAPLRRHFLPGVKVEYSVSPRQSAYRVQIHRIQIQNQLPGAIF
PYVFYPVKLPKSITMDSEPKPLTDISIVTRTAGHSDISRIKYFKVLIQEMDLKLDLGFLY
AILDLFTAEDARNTNSEQEVELFEKDIEYIKTELNHVSAADNSPISLYEYFHISPIKLHL
SFSLSTGGEDGLKEKRDKEIIPVQSLNLLLKSIGATLTDVQDVVFKLAFFELTFQFCTTQ
QLQWEVIRHYSKQAIKQMYVLVLGLDVLGNPFGLIRGLSEGVEAFFYEPYQGAIQGPEEF
VEGMALGVKALVGGAVGGIAGAASRITGAMAKGVAAITMDEEYQQKRREAMNKQPSGLRE
GLTRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMAS
STFQGIKRAAETSQDVESLRPPRFIHEDGVIRPYKEREGLGSQMLQKIENGRFAKYRYFA
HAKVNDSDFLMITKRGIFFVTKGTFGQLTCEWQYLFEEFTKDPMIVENRRLRIEAKERVK
SVFHAKEFGKIINFKTPEIAKWVLAKLEDARESLPKY
NT seq
9834 nt
NT seq
+upstream
nt +downstream
nt
atggtcttcgaaagcttggtggttgatgtcctgaaccgatttttaggggactacgttgtc
aaccttgacagctcgcagctaaagcttggcatatggggaggtgatgctgttctcacaaat
cttgaaataaaggaaaatgccttgagtcaacttgacatcccttttaaagtcagagctggt
catataggacggctagagcttaagattccatggaaaaacctttacacccagtcagtggag
gcaacactggatggtgtctatctgctcatcgtccccacagcaagtataaagtatgatgca
gaaaaagaagaaaagcagctacaggaggctcgtcagagggagctacagcgaatagaggag
acaaagctgaaagccgctgagaaagagaaccctagtctggagaaacaagacacgtttgtg
gagaagctcgtcactcaggtcatcaaaaacctgcaggttaagatctccaacatccacgta
cgctatgaagacgatgtcactaatccaaattgtcctttgtcttttggagtgtcacttaaa
aacctcagccttcagacctctgatgagaactggaatccaagtcttctggatgaaaactca
cgacttttctttaagttggttcagctcgacagcttgtttgcctactggaatgtcaactcg
actctcttctccaatcacagcccagatgaggctttgcgatgtcttcagagaagcatggaa
atcagcagctctctgtccatcagccatgatttcatttttcgtcccatctcagctgatgct
aaattacggatgaatcctcgctcagacttggaccactcttctcctaaagttgacctcatg
gtcaatctaagcgaagtggctatagagctcaacagacctcagtacattagcatcttggag
ctgctgggctctgtggatatgatgtcacgtaacctgccatacaggaagtacagacccgtg
gtccaagttcacaaaaatgcctatatatggtggaggtatgtgatcacaggcatccttgaa
gtggatgtgaagcctcgtctccacatgtggtcatgggatcatattcgttgccacaggcag
aaggtaaaacgctacagagagctctacaagaccaaaatcaccagcaagaaacccagcgag
gagcttctcaaggcactagaggagccggagaagaccttggacatttttaacatcacgctg
gccagacagcaggctgaggtggaggcaagcaaagccggcttgtgtatttaccgtcctggg
gtgaagatggaggaagaggagtcccagggctggttaagctggatgtggaactggggagga
gagccggaaacagagaaaaaagaagtcaagactggaggttttgatgagctgttgacccct
gctgagaaagctaaactctacactgccattggttacagtgagactgctgctaatccaaac
ctgccaaaagattttgaggacatgaaggtgaattttcacatggagaggctgaccgtatct
attaaagacaacaaggacaagaacgagatcatcaagctgaccgtgggagagctcatgtcc
acgctcacacagaggcccggagcacaagctatcaaactaacagcccagctcagtttgttt
gaagtcacaggtctggccagtaaccggcctgcacctacgctgctgtcatcccgcaaagcc
gccacaggagacggtaccccactgctctgcattctgtttgagaccaacccgctggacgag
agcgccaaccagcgacttcatgtggaatcacagccgttagaaatcatctatgatgcaata
acagtgaacagtatgtcactgttcttcatgcctcctgacgacctgcagctggatgagctc
accaacgctacgctcatgaaacttgaacagtttagagaccgcacagccacaggtctaatg
tacgtgattgaaacacagaaggttctggacttgaaggtgaacctgatggcctcttatgtc
atcatcccgcagacgggcttttacaacggcacgcagaacatcctgctgctggacctcggt
catttccagatgtccagtcaaagcaagaagcatctgcctcagctgtcagtgggttccagc
aatattgaagacatcatgttgagagcgtatgacagctttgatgtgcagctcagcagcctc
cagtttctctacagcaaaccagatggtgactggaaaatggctcggaagcagaagcgttca
cctctccacatcttagagcctgtggatcttaaagttgttttcagcagagccatggttgtc
aaagactcccgcatggcaaagtataagatgtcaggagagctccccctgctgtctcttcgc
atttctgacgtcaaacttcgaagtgttttggagctagtggagagcatcccactgcctgag
agcagacctgcacacagctctgctccatccaccaatacaaagccaaagtcattcacccct
cagctcactcccaggaagcctctgaacctggctgaccagcgctcttctctcatttttgag
tcatgtgagaccatcagcatcacttccttgggatctgaagaagatttgttctatgacgct
cccagttctcccatcggtgataaaccattcttcccagataatcccatgccgctgcgctac
gcagacttacacaaaagaaaaagtttgttgaaggacgacgttcagaaaaacatgaccgac
ctgatcttgacctttgaaatcagtgagttttctgttcagttgtgtcgtctgtctgaagat
caggagatcacagtgctccacctggacatagagggcctgggcacagaactgaaaatacgc
acctttgatatgacgtccaacacatacctacgagagatctgcctcaagtgccctgaatac
atggactctgaagagaagcaggttcagctgatcacaactctggacaacacagaagttgac
cttcttaccctggagtatattaaggctgataagaacggcccagagttcaaatctcagcac
aacaacacagaacagctcatcaaggtgaccttctcatccctggatgtccacctccacaca
gaggctcttctcaacaccatgaacttcctcagcaacctcctccctccctccacaaagaag
gaaggtggtcaagaggagctccccaccatcccagaggaggaagaggccgaggcagagaag
gaggaagagaagaaagaggagacagctataaccaggaaaaaaagtacaaagagtaaaaag
tttgcagatgtggtgaatctgcatatcagagctgatcttcgctgtctgaaggttttcatt
cgaggacagaaggcgaggatctctgagatcagtatcgaaggtctggtttctgaggttctg
atgaggaagaaggagatggaggttcatgccaacctgaaaaacattgtgatcctcgactgt
gacaaagacgctttctacaagaaggcggtgtctatagccgataaggaagtgtttgccttc
cgcatggtaaactacacagatgcaacagagggagacgcctacctggacatgtctaaagtt
gatacctttgtcacgctgactgtgggatgcatccaggtcatcttcctcaacaagtttgtt
tcctccatactggcgttcatcaataacttccaggaggctaaagaggccctggctgaggtg
acagtccaggctgcagaaaaagcagcgtcaggtgtaaaggagctggcagagcggagcact
cggattgctctaaacgttcactttaatgcacctgtcatcttccttcctcagtcctcgtcc
tcctccaatgtcattgtagctgacctcggtcttctgtctgtcaagaactgtttcgccaag
cagccctgtaaaagcaatacgaagatcccgcctgttgtggataaaatggcagtgaaactg
acagacctcaagatgtacaggaccaaatatataaatgaagggtttcagggagagactcag
ctgttgaagccagtcagcctggacctggaaatccagagaaatctgtcatccaactggtac
cacagcatacctgacatcgagatcactgcccatcttaaaccactgagtctgatcctcagt
caggatgacatgacagtagtcctgaggactctgagtgaaaacctctcagagaaatctgat
gctgttcctgctgcccctcctgttccaaccacagaccactcttctgactctgtgtccaac
aaagagtctcagggctcaggaaccacaggaccagccagcagtaacacagtcgtgacgtct
gctgttgtggagacgcagaaaagcagcaggctgaagatcacgctcaaactggacttcaag
tttgactcaatgacactcatcttgtacagccccaatgagaatgtgatacagctgttggat
tcccacgatgagcagctgaagttggcagagttcactctgggcacaatctccacctccgtc
cacatgttttccgatggctccatgaaggcctcagtgctactggctacttgtctgcttgat
gataagagacccaggatcaagatggtcactccaaggatgatggcgatgcgtcccggtgca
gaacaaaacatgatggtggaggtgagctaccatcagggccgagatggcaccactttggac
acattggtgcaggatgtttacctctgtgccagcatggagttcctgctcacggtggcagac
atctttctcaaggccacccagcagggattcactcaggtgccacagtcgaagagcagcagc
ggggcgggggataaaaagaacataaactcctctgtcacatctaaagagtcaactgctgct
ccagccgttgtgtcaaagacagagatgaatgttgtggtgagaaacccagagattgttttt
gtagctgacctgacacgtgcagacgccccggccctggtgatgaccacagagtgtgagcta
gtgatgaaaagtgacgcagagggatcacagatgacagctgctatcaaagacctcaaggta
gttgcttgtccctttctgagagagaagcgaagaaacaacgtgacgacggtgctgcagcct
tgtcaggttttcttccagagtacgcagacaccaacatcccctcaagctatggaagtctca
atcaatgcgctcactctgaaggtgtctcctatcatcatcaacactgtgatcacaatccag
tcagcgctgacacccaaagcagagacacctgaggagctggaaagtcctgttcctgtggac
ttgtgggagaaacgcagctggaaggagctcaaactctggttcctagacgaagagggcgat
gaggacacagcgtcactggctccactgataccacagggagagtcattacagctgagcatc
aagttgatatgtctgactctggaggctggagtaggacatcggaccgtcccaatgcttcta
gccaagtcctccttccatggagatgtcaaaaactggtcaacactcattaatttgcacagc
gagctcaacctggaggttcactatttcaacgaggtgatgggagtgtgggaaccactgctg
gagcctttagaggatgagacgagagacggttttagaccatggagactggaactgaagatg
aagaagaagccactgaagtccactgagatgttagatgagttggactacaacatccccgac
tataagaccgtcattgtcatcagcagtgaagaccagctcaatatcactctttctaaatgt
ggactcagcatgctgagtaaccttggcacggcatttgctgaggctgccaaacagacggca
gactccttccagaaagatgaagctccatttgtagtgaaaaatcgcctgggcctgccagtt
tctgtccgccacagtgagatgtttagtcccattggccagcaaagtacaaacagcaccgtg
cagcttgaagatggaggaaccctcgggatggattatacaaccacaacagactcagaccag
ttctcagcgatgatctctttgagtggaaaagactactacatagagccaaccccgatgggc
cacacctcagccagcgtgatccccctgatcaaggtgggcagaggaatgtacagtgtgatg
cacaatgagtcaggagtcactcgcttcctggtctgtcagatttactcagtggagggcagc
aagtacatcaagatccgctctcctttccagatcatcaatcatttcacaatcccattcaaa
gtgtttgaaggatcaacatgtctgggtacagcccttcctactgaggagttctgtgttcct
ctggactcatacaggtctgagttgagcctgcggccggtaacagaggatgatgttgacagt
aaagacgagcagtttgagtgctcagaaggtttcagttacgaagatgtcagcaaccagcag
ccagaggcacgcctacagcagagctgccgtcgcactggagaccagggcggtgtgatggtt
gtcaacattgtgccggtaaaagatgctgtgactttcaaacacactggagaagccggggag
aactttgatgtgccgtttgtgcttcacctttggccttccatcctgctccgcaacctgcta
ccctaccccatctcatacaaactcaaggacagtggggtctctgcccctgaagctactctg
gacccaggtcactctgcccagcttcatactgcagtcatcaatcagacaagtctagatctt
cgtctgctgagctacctggctcaggactggtctgctcagtacaggctccacagtgaccag
gaagagatcaccttcatagttttccagtctctacgagagaatgatgaagatgatggtgaa
ggggaggacaggaagagggcagagttggacatagcggtgcatgttaaatatgacttggga
caaacggtgattgctatccactcaccatactggatggtgaacaagacgggcaggctgctg
caatacaaggcagatgatattcaccggaaacatccgctggactacgacatgcctctgctc
ttctccttcaaaccccgatatttcctgaaaaacaacaaggtccgtctgatgatctcagac
agcgagctctctgacgaattctctctggacactgtgggcagccatggagatgtgaaatgt
aaaggtcgctacaaagattacctggtgggtgtgaagattgatgcaagcaccttcagtttg
acccgcatcgtgagctttgtgccgttctacatgctggtcaacagaacaaagcacagcatc
ttcatctgtgaggaagggcaggagaactggactgaggctcaaccagaacagtcagccatt
cccttctggcctgagaacgacaccaagctgctgaagattaaagtagatggatgtttgttg
cctcctcaaaggatcgactttacacgaccagaaaactgcctcctgcttcatctggacaac
tcagtgggtgggatcattgttgacgtgaacctgtcagagcactcagccactatccgattc
tctgagtaccatgacggtgcagcacctttcctcatcattaaccacaccaaagaccagact
ctccacttccaccagagcgccaaggaagaaaccgtgtgggttcctgactctctgctcgac
ctctccttctcaggggaggaggaaagttctcaaaaggaagcggagcacgaggagctggag
gccgggaaagctgttcactacacctggactgaacccaccgggtccagggagctgtgctgg
aggtgggggggctacagcgggaagctgaagagtgaggaggacatgcgtcaggacatgaac
aacgagggaaagctgttcttgatctccttttatgagggtctacagcgtgttgtgttgttc
actgaggagcagcgaatctacaagcttctctgtgagagcgagaaggctcagctggctgag
caggaaatcatcctgtcactccagaacgtcggcatctctctgatcaacaacagcaccagc
caggaggtctcctttattgggatcacaagctctgatgtggtgtgggaattaaagcctaag
aagaagaaccgctggaagactctgagcaccaaagaagctgagatgctggagaacaaattt
aaggagtacacagaatctggacgagtggacagcgacccaattgaattggaaaataactac
caggttgtttttactcctaacggcgtggacatgcggatgctggagccatgtgaggctcct
ctcaggaggcacttcctgcctggggttaaagtggagtacagcgtctcacctcgacaaagc
gcctaccgagtacaaatccaccgtattcaaatccagaatcagctgcctggagcgatcttc
ccctacgttttctaccctgtaaaactgccaaaatctatcacaatggactcagagcccaaa
cctctaactgatatcagcattgtaaccaggacagcaggacactctgatatctctcgcatc
aagtatttcaaggtgttgatccaggagatggatttgaagcttgatcttgggttcctttac
gccatcctggaccttttcacagctgaggatgccaggaacaccaactcagagcaggaggtg
gaactgtttgagaaggacatcgagtacataaagacagagctaaaccacgtctctgctgct
gacaactctccaatcagcctctatgagtacttccacatatcacccatcaagctgcacctg
agcttctctctgagtacaggaggagaagacggcctgaaggagaagagggacaaagaaatc
attcctgtccagtcgctcaacctgctgctgaagagcatcggtgccacgctcactgacgta
caggatgttgtgttcaaactggccttctttgagctgaccttccagttttgtaccacccag
cagcttcagtgggaggtcatcagacattattccaagcaggctattaaacagatgtatgtg
ttggttttgggcttggacgttcttggaaatccttttggactcatcagagggctgtcagaa
ggcgttgaagcctttttctatgagccttatcagggagccatccaggggcctgaggagttt
gtggagggaatggctctgggtgtgaaggctctggtgggaggagctgtaggtggtattgca
ggtgcagcctccaggatcactggtgctatggccaaaggtgtcgctgccataacgatggat
gaggaataccagcagaagagacgagaggcgatgaacaaacaacccagtggcctgagagag
gggctgaccaggggtggaaagggattagtgtctggatttgtcagtggcatcacagggata
gttaccaaacctattaaaggagcccagaaggagggagcagcaggattctttaaaggtgtg
ggcaaaggtttagtcggcgctgtggccagaccaacaggaggcatcatagacatggccagc
agcactttccaagggatcaagagggcagcagaaacttcccaagacgttgaatctctgcgc
cctcctcgtttcatccatgaggacggtgtcatacgcccatacaaggagagggaaggcctc
ggcagccagatgctccagaaaattgagaacggacgttttgccaaatacagatactttgct
catgccaaggtcaatgactctgacttcctcatgatcaccaagaggggaatattttttgtg
actaaaggcacgtttggccagctgacctgtgagtggcagtatctgtttgaagagttcacc
aaggatccaatgatcgtagagaaccgccgtctacgtatcgaggccaaggaaagagtgaaa
tccgtcttccatgccaaggaatttggaaagataataaactttaaaactccagagattgcc
aaatgggtccttgccaaactggaagatgcaagagagagtttaccgaaatactga
DBGET
integrated database retrieval system
