Cheilinus undulatus (humphead wrasse): 121510116
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Entry
121510116 CDS
T07473
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03030
DNA replication
cud03410
Base excision repair
cud03420
Nucleotide excision repair
cud03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121510116 (rfc5)
03410 Base excision repair
121510116 (rfc5)
03420 Nucleotide excision repair
121510116 (rfc5)
03430 Mismatch repair
121510116 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cud03032
]
121510116 (rfc5)
03036 Chromosome and associated proteins [BR:
cud03036
]
121510116 (rfc5)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121510116 (rfc5)
DNA replication proteins [BR:
cud03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121510116 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
121510116 (rfc5)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121510116 (rfc5)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121510116 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
121510116 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_lid_RFC1
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
ResIII
AAA_14
DEAD
AAA_24
AAA_16
DUF815
PhoH
AAA_7
nSTAND_NTPase5
AAA_5
AAA_19
AAA_30
ATPase_2
TIP49
nSTAND3
DNAX_ATPase_lid
AAA_2
Glyco_hydro_57
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
121510116
NCBI-ProteinID:
XP_041643963
LinkDB
All DBs
Position
LG5
Genome browser
AA seq
335 aa
AA seq
DB search
MASTSNAPSQARNLPWVEKYRPEKLDDLISHKDILSTIQRFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKEREFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQKENVDITPDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRSD
IANILDWSLNKDFTTAYKQILQLKTLKGLALHDILTEVHLLLHRVDFPPAIRTGLLIKLA
DVEHRLASGTDEKIQLSSMVAAFQAVRDLVVSEAS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaagtaatgcgccttcacaagcaagaaatctaccatgggttgaaaaatac
agaccggagaaacttgatgatctgatctcacataaagatatcctgagcaccatccaaagg
tttatcagtgaggacaagctcccccatctcttgttttatggcccacctggaacagggaaa
acctccaccatccttgcctgtgccagacagctgtacaaggaaagagagttcaactctatg
gtgctagagctaaatgcatcagacgacagaggaattgatgtcgttcgaggccctattctg
agttttgccagcaccaggaccatcttcaaaaaaggtttcaagttggtgatattggacgag
gctgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagttcaca
gaaaacacccggttctgtctcatctgtaactacctgtctaagatcatccctgccctgcag
tctcgctgcacaaggtttcgcttcggcccgctgtcccctgatcagatgatccctcggctg
gagcatgtgatccagaaggagaatgttgacataactccagatggaatgaaggccattgtg
accttatcatcaggtgatatgagaagatcccttaacatactacagagcacgagcatggca
tatggaaaggtgacagaggacaccgtgtacacctgcactggtcaccccctccgctctgat
atcgccaacatccttgactggtcgctcaacaaagactttaccacagcgtataagcaaatc
ctccaactgaagacattaaaaggtctggccctgcatgatatcctcactgaggttcatctg
ctcttacacagagtggactttcctccagctatcaggaccggccttctcatcaagctggct
gatgttgagcacagacttgcctcaggaaccgacgagaagatccagctgagctccatggtc
gcagctttccaggcagtgagagacctggtggtcagcgaggcctcatag
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