KEGG   Cheilinus undulatus (humphead wrasse): 121510116
Entry
121510116         CDS       T07473                                 
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03030  DNA replication
cud03410  Base excision repair
cud03420  Nucleotide excision repair
cud03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    121510116 (rfc5)
   03410 Base excision repair
    121510116 (rfc5)
   03420 Nucleotide excision repair
    121510116 (rfc5)
   03430 Mismatch repair
    121510116 (rfc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cud03032]
    121510116 (rfc5)
   03036 Chromosome and associated proteins [BR:cud03036]
    121510116 (rfc5)
   03400 DNA repair and recombination proteins [BR:cud03400]
    121510116 (rfc5)
DNA replication proteins [BR:cud03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    121510116 (rfc5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    121510116 (rfc5)
Chromosome and associated proteins [BR:cud03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    121510116 (rfc5)
DNA repair and recombination proteins [BR:cud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     121510116 (rfc5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    121510116 (rfc5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_lid_RFC1 AAA_11 AAA_22 AAA_assoc_2 RuvB_N ResIII AAA_14 DEAD AAA_24 AAA_16 DUF815 PhoH AAA_7 nSTAND_NTPase5 AAA_5 AAA_19 AAA_30 ATPase_2 TIP49 nSTAND3 DNAX_ATPase_lid AAA_2 Glyco_hydro_57 Thioredoxin_6
Other DBs
NCBI-GeneID: 121510116
NCBI-ProteinID: XP_041643963
LinkDB
Position
LG5
AA seq 335 aa
MASTSNAPSQARNLPWVEKYRPEKLDDLISHKDILSTIQRFISEDKLPHLLFYGPPGTGK
TSTILACARQLYKEREFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSPDQMIPRL
EHVIQKENVDITPDGMKAIVTLSSGDMRRSLNILQSTSMAYGKVTEDTVYTCTGHPLRSD
IANILDWSLNKDFTTAYKQILQLKTLKGLALHDILTEVHLLLHRVDFPPAIRTGLLIKLA
DVEHRLASGTDEKIQLSSMVAAFQAVRDLVVSEAS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atggcgtcaacaagtaatgcgccttcacaagcaagaaatctaccatgggttgaaaaatac
agaccggagaaacttgatgatctgatctcacataaagatatcctgagcaccatccaaagg
tttatcagtgaggacaagctcccccatctcttgttttatggcccacctggaacagggaaa
acctccaccatccttgcctgtgccagacagctgtacaaggaaagagagttcaactctatg
gtgctagagctaaatgcatcagacgacagaggaattgatgtcgttcgaggccctattctg
agttttgccagcaccaggaccatcttcaaaaaaggtttcaagttggtgatattggacgag
gctgatgccatgacccaggatgcccagaatgcattgcggcgagtgattgagaagttcaca
gaaaacacccggttctgtctcatctgtaactacctgtctaagatcatccctgccctgcag
tctcgctgcacaaggtttcgcttcggcccgctgtcccctgatcagatgatccctcggctg
gagcatgtgatccagaaggagaatgttgacataactccagatggaatgaaggccattgtg
accttatcatcaggtgatatgagaagatcccttaacatactacagagcacgagcatggca
tatggaaaggtgacagaggacaccgtgtacacctgcactggtcaccccctccgctctgat
atcgccaacatccttgactggtcgctcaacaaagactttaccacagcgtataagcaaatc
ctccaactgaagacattaaaaggtctggccctgcatgatatcctcactgaggttcatctg
ctcttacacagagtggactttcctccagctatcaggaccggccttctcatcaagctggct
gatgttgagcacagacttgcctcaggaaccgacgagaagatccagctgagctccatggtc
gcagctttccaggcagtgagagacctggtggtcagcgaggcctcatag

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