Cheilinus undulatus (humphead wrasse): 121510276
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Entry
121510276 CDS
T07473
Symbol
cnot6l
Name
(RefSeq) CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121510276 (cnot6l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121510276 (cnot6l)
Enzymes [BR:
cud01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
121510276 (cnot6l)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121510276 (cnot6l)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121510276 (cnot6l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_14
LRR_4
LRR_1
LRR_R13L1-DRL21
LRR_LRWD1
type_II_gspD_N0
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
121510276
NCBI-ProteinID:
XP_041644181
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All DBs
Position
5:complement(53787220..53801339)
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AA seq
551 aa
AA seq
DB search
MPKEKYDPPDPRRCYTIMSADEAANGKKSHWNELEISGRVRSLSNSLWTLTHLTALHIND
NNLSRLPPDIAKLPHLVYLNLSNNKLRSLPAEIGNIVSLRELLLNNNLLRVLPYELGRLF
QLQTLGLKGNPLSQDILNLYQQPDGTRKLLNYMLDNLPVHPEQLPQRPWISLKDRDTAST
TAVFSVMCYNVLCDKYATRQLYGYCPSWALSWEYRKKGIMEEITHCDADIISLQEVETEQ
YYTLFLETLKDHGYDGYFCPKSRAKLVSEQERKHVDGCAVFFKTQKFSLVQKHTVEFNQV
AMANSEGSEVMLNRVMTKDNIGVAVLLEVNKDAFSGGVKPPQDRQLILVANAHMHWDPEF
SDVKLIQTMMFLSELKSIAEQASGSVATGSPSSDLSSIPIVLCADLNSLPDSGVVEYLSN
GGIAENHKDFKELRYNECLTNFNCNGKNGNSDGSITHSFQLKSAYDSNLMPYTNYTYDFK
GVIDYIFFSKTHLSVLGLMGPLDSQWLVDNNITGCPHPHIPSDHFSLLAQLELKPPIPPP
SFNGLHLPVHR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaagaaaaatatgaccctccagatcctcgtcgatgttacaccatcatgtccgcc
gacgaggcggccaacggaaagaaatctcactggaatgagctcgaaatctcaggtcgtgtt
cggagtttgagcaactcattatggacgctcactcatctgacggcgcttcacatcaacgac
aacaacctgagccgcctccctcccgacatcgccaaactgcctcacctcgtctacctgaac
ctgtccaacaacaagctacgcagcctgcccgccgagatcggcaacatcgtctctctcagg
gaattgcttttaaacaacaatcttttacgagtcctgccttatgaactcgggagacttttc
caactgcagaccctcgggctgaaaggaaaccctctgtcccaggacatcctcaacctttac
cagcaacctgatggaacccggaaacttttgaactacatgctcgacaatctgccagttcac
cccgagcagcttcctcagagaccgtggatcagcctgaaggacagagacacggcgagcacc
acagccgtgttcagcgtcatgtgctataacgtgctgtgtgataaatacgccacgcggcag
ctctacggatactgtccgtcctgggcgctcagctgggagtacaggaagaaaggcatcatg
gaggagatcacgcactgcgacgctgacatcatcagtcttcaggaggtggagacagagcag
tactatactctgtttctagaaaccctgaaggatcatgggtatgacgggtatttctgtccg
aagtctcgagccaaactcgtctctgagcaagaaaggaaacacgtggacggctgcgctgtt
ttcttcaagacacagaagttctctttggtccagaaacacacggttgagtttaaccaggtt
gccatggcgaactctgagggctctgaggtgatgctgaaccgggtgatgaccaaagacaac
atcggggtcgctgtgctgcttgaagtcaacaaggacgccttctctggaggtgtaaagccc
cctcaggaccgtcagctgattctcgtggcgaacgctcacatgcactgggatcctgagttc
tccgacgtgaagttgatccagacgatgatgttcctgtcggagctgaagagcatcgctgag
caggcatcaggctccgtggcaaccggctcgccatcctccgacctgtcgtccatcccaatt
gtcctctgtgctgacctcaactcgctgcccgactctggtgtggtggaatacctcagcaac
ggtggaatagccgaaaatcacaaggacttcaaggagctccgctacaatgaatgtctgacc
aactttaactgcaacggaaagaacggcaactcagatggcagcatcacccacagcttccaa
ctaaagagcgcctacgacagcaacctgatgccttacaccaactacacgtacgactttaag
ggtgtgattgactacatcttcttctctaaaactcatctgagcgtgctcggtctaatggga
ccgctggacagccaatggcttgttgacaacaacatcaccggctgcccccacccccacatc
ccctctgaccacttctctctgctcgcccagctggagctcaagcctcccatcccgccccct
tcctttaacgggctacacctgccagtccataggtag
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