Cheilinus undulatus (humphead wrasse): 121510298
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Entry
121510298 CDS
T07473
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121510298 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121510298 (usp39)
Spliceosome [BR:
cud03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
121510298 (usp39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
121510298
NCBI-ProteinID:
XP_041644212
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Position
5:44588247..44595550
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AA seq
499 aa
AA seq
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MVSVKREREAAVDDDDDDRVAPKISRGRVIEDRRSRHCPYLDTINRSVLDFDFEKLCSIS
LSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLE
DITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQAFSNVP
PLRNYFLEEENYKGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCS
KKNFQITKQGDAVDFMTWFLNALHGALGGTKKKPSIITKAFQGSMRIFSKKLPHPDLPPE
EKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGSTEK
EYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEA
QVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVTDILPQMITLSEAY
IQIWKRQGSDDDTNNHSGK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgtaaaacgagaaagagaggctgcagtggacgacgacgacgatgatagagtt
gcaccaaaaataagcagaggacgtgtaatagaagacaggagaagtcgccactgtccttac
cttgacactataaacaggagtgtgctggactttgactttgagaaactctgctccatctcc
ctctctcacattaatgtctacgcctgccttatatgtggaaagtactttcaaggtaggggt
cttaagtctcacgcctacacccacagtgtgcagtttactcatcatgtgttcctgaatctg
cacacactcaagttttactgtctgcccgacaactacgagatcattgactcttcactggag
gacatcacgtacgtgctgaagccaacttttaccaagcagcacatcgcaggtctggataag
caggggaagctgtaccgggcgtacgatggaacgacctacctgccgggcatcgtaggactc
aacaacatcaaagccaatgactacgccaacgtggtgttacaggctttttccaacgttcca
cctttgagaaactacttcctggaggaggaaaactacaagggaatccgcagacctccaggg
gacatcatgttcctcttggtgcagaggtttggtgagctgatgcggaaactttggaacccg
agaaactttaaggctcacgtttctccacatgagatgctgcaggctgtggtgctgtgcagc
aagaagaacttccagattaccaaacagggagatgctgtagacttcatgacatggttcttg
aacgctctgcatggtgctttaggaggaacaaagaaaaagccttcaatcattacaaaagcc
tttcaaggctccatgagaatcttctccaagaaacttccgcatcctgatttaccaccagaa
gagaaggaggcattgctggtgacagaggagtaccaggagcagatgtccgagtccaccttt
cttttcctgactctcgacctgccaacagctccgctttacaaagacgagaaggagcagctg
attatcccacaggtccctctcttcaacatcctgggcaagttcaacggcagcacagagaag
gaatacaaaacctacaaagagaatttcctgaaaaggtttcagctgaccaaacttcctccg
tacctcatcttttgcatcaaaaggttcaccaagaataacttctttgtggaaaagaacccc
acaattgttaacttccccatcacgaatgtagacctccgtgagtacctgacagaagaagct
caagttactgagaagaacaccacttatgacctcgtcgccaatgtagtgcatgatgggaaa
cccacagagggagcgtacagaatacacgttcttcatcatgggactgggaagtggtatgag
atgcaggacttgcaggtgactgacatcctcccccagatgatcaccctgtctgaagcgtac
atccagatctggaagagacaaggcagtgatgatgacacaaacaaccactcggggaagtaa
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