KEGG   Cheilinus undulatus (humphead wrasse): 121510898
Entry
121510898         CDS       T07473                                 
Name
(RefSeq) collagen alpha-1(IX) chain-like
  KO
K08131  collagen type IX alpha
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud04510  Focal adhesion
cud04512  ECM-receptor interaction
cud04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cud00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121510898
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121510898
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    121510898
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cud00535]
    121510898
Proteoglycans [BR:cud00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   121510898
SSDB
Motif
Pfam: Collagen Laminin_G_3 Laminin_G_2 Laminin_G_1
Other DBs
NCBI-GeneID: 121510898
NCBI-ProteinID: XP_041645174
LinkDB
Position
6:complement(46623572..46669216)
AA seq 879 aa
MCPQISVGEDRFPGFYIMSQFHIAELARRGTVKKVPGSSPQHVAYHIGPAFNFRINTRSA
YPLGLPEEFAFAAVLRMSGSTINKKWNIWQMQDVNGNEQLSVRLNGQSRTVEFTFTALDG
GRQTVVFSSVSSLFNDQWHTVLLDVSKRSVTLFLDCAMIGSQSLPPRQEVSLDGFTLIGK
LKDNSVMAVPFELQSMLIHCDLTRARSDVCHDLPARTSTDVTEVLRNQGTAGPPGPAGVP
GIDGIAGERGDDGVEGPSGPDGDAGKPGSSGLPGIPGNDGLTGPIGDPGPDGPPGQKGEP
GKPGPRGTTGVGQDGPPGPPGPGGLPGEVGKVGPPGAMGVRGPQGPRGPQGPRGAAGMQG
TGDLCPDSCPPGTSGHPGLPGMKGHKGVKGEAGEPGKQGHKGEEGDQGSPGEVGSQGPTG
PQGLPGATGMMGSKGEMGPRGLDGDPGPQGVAGATGDQGQRGVMGESGPKGEMGAQGKRG
ITGLPGPKGEAGLPGVDGREGIPGMPGAKGSIGKAGAPGEVGLQGLPGLPGSPGPKGSGG
SKGDSGQPGLPGTMGSAGKTGERGEQGEVGPVGPIGNPGDVGEQGPEGPAGKMGARGPKG
DPGLPGLPGPPGLPGVKGERGERGESGPKGEQGVQGDEGTAGEKGDVGEPGESGAKGEVG
NPGEPGRRGPEGSRGQPGIEGPPGSPGPRGMQGNRGAPGVRGSQGPAGKEPSDQHIKQVC
MRVMQEQLAQLAASLRRPESGVAGLPGKPGPPGPPGAPGDNGFPGQAGARGLPGLKGPPG
ALGAKGPKGEMGDKGSRGPTARGPKGQPGPPGLPGEPGKPGYGQDGRDGQRGPPGSPGQP
GVPGPPGAAGPNGYCDPSACNLPAGAAHQSLDVKGPAGN
NT seq 2640 nt   +upstreamnt  +downstreamnt
atgtgccctcagatcagtgtcggggaggatcgcttcccaggtttttacatcatgtcccag
ttccacattgcagagctagcaagaagaggaacagtcaaaaaggtccctggatcatctcct
cagcatgttgcttatcatataggccccgcattcaacttcaggatcaacacaagatcagcc
tatcctttgggacttccagaggagtttgcatttgcggccgtactgcgcatgagtggcagc
accatcaacaaaaaatggaacatctggcaaatgcaggatgtgaatggcaacgagcagctg
tctgtcagactcaacggacagtccaggactgtggagtttaccttcacggcgctggacggc
gggagacagactgttgtgttcagctctgtgtcgtctcttttcaatgaccagtggcacacg
gtgctgctggacgtcagcaagcgctccgtcacccttttcctggactgtgccatgatcggt
tctcagagtttaccgccacgacaggaagtcagtctggatggcttcacgttgattggaaag
ctcaaggacaactcagtgatggcagttccgtttgagctccagtcgatgctgattcactgt
gacctgacgcgagcccggtccgacgtttgccatgacctcccagccaggacatcgactgat
gtgaccgaggtgctgaggaatcaaggaactgctggccctcctggacctgcaggtgtccca
ggaattgatggcatcgctggggaaaggggagacgatggcgtggagggcccttctggacct
gatggagatgcaggtaaaccgggctcttcgggattacctggaattcctgggaacgatggt
ctgaccggccctattggagatcccgggcctgacggtccccccggacagaaaggagaacca
ggaaaacctggacctcgtggaacaactggtgttgggcaagatggaccccctggaccacct
gggcctggaggacttccaggtgaagttggaaaagttggaccaccaggggccatgggtgta
agaggaccacaaggacctcgtggaccacaggggcctagaggtgcagctggaatgcaaggc
actggcgacctgtgcccagactcttgtccacctgggacctctggacatcccggccttcct
gggatgaagggtcacaaaggtgtaaaaggtgaagcaggagaacctgggaaacaagggcac
aagggtgaggagggagaccagggaagtccaggggaggtcggatcccagggaccaacgggt
ccccaaggacttcctggagccacaggaatgatgggctccaaaggagagatgggtcctcga
ggtcttgatggagacccaggtccccagggtgttgccggggcgactggagatcaaggccag
aggggtgtgatgggcgagtctgggcctaaaggtgaaatgggtgctcaagggaagagagga
atcacaggcttgccgggtcctaaaggagaggccggcttgccaggagttgatggtcgtgag
ggtattcctgggatgccgggagcaaagggatccatcgggaaggcaggcgctccaggagag
gtcggacttcaggggcttcctggtctgcctggatcacctggaccaaaaggctcgggtggc
tctaagggagattctggtcagccgggcttacctgggaccatgggatctgcgggtaaaacg
ggtgagcgtggagagcagggagaggtcgggcctgttggacctatcggtaatcctggagat
gttggagagcaaggccccgaaggtccagctggaaagatgggtgcaaggggacccaaaggt
gaccccggcttgcctggtctccctggtcctcctggtctgcctggagtgaaaggagagagg
ggagaacgtggagagtcaggacccaaaggagagcagggagtgcaaggtgatgaaggaact
gcaggagaaaaaggagatgtcggtgagccaggagagtctggagctaaaggagaggtcggt
aacccaggagagcctggcagaagaggtcctgagggtagtcgagggcagcctggcattgag
ggcccgcctggctcacctggaccacggggcatgcagggaaacaggggagcacctggagtc
agagggtctcaaggtcccgcgggtaaagagcccagtgatcagcacatcaaacaagtttgc
atgcgagtcatgcaagaacagctagctcagttagcggctagtttaagaagacctgagtct
ggcgtggctggtttacctgggaaacctggacccccaggacctcctggagcaccaggagat
aatggcttccctgggcaggctggtgcaagaggcctccctggactcaaagggccgccagga
gctcttggagccaaaggacccaaaggtgaaatgggagacaaaggctccagagggcccact
gcaagaggacctaaaggtcagccgggacctcctggacttcctggcgagccaggcaaacct
ggctatggtcaggatggtcgagacgggcagaggggacctcctggctctcctgggcagcct
ggtgtacctggtcctcctggagcagctggacctaatggttactgtgacccgtcagcctgt
aacctcccggcaggagccgcccatcagagtctggatgtgaaaggacctgctgggaactaa

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