Cheilinus undulatus (humphead wrasse): 121510898
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Entry
121510898 CDS
T07473
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04510
Focal adhesion
cud04512
ECM-receptor interaction
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121510898
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121510898
09142 Cell motility
04820 Cytoskeleton in muscle cells
121510898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cud00535
]
121510898
Proteoglycans [BR:
cud00535
]
Extracellular matrix (ECM) proteoglycans
Others
121510898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
121510898
NCBI-ProteinID:
XP_041645174
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Position
6:complement(46623572..46669216)
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AA seq
879 aa
AA seq
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MCPQISVGEDRFPGFYIMSQFHIAELARRGTVKKVPGSSPQHVAYHIGPAFNFRINTRSA
YPLGLPEEFAFAAVLRMSGSTINKKWNIWQMQDVNGNEQLSVRLNGQSRTVEFTFTALDG
GRQTVVFSSVSSLFNDQWHTVLLDVSKRSVTLFLDCAMIGSQSLPPRQEVSLDGFTLIGK
LKDNSVMAVPFELQSMLIHCDLTRARSDVCHDLPARTSTDVTEVLRNQGTAGPPGPAGVP
GIDGIAGERGDDGVEGPSGPDGDAGKPGSSGLPGIPGNDGLTGPIGDPGPDGPPGQKGEP
GKPGPRGTTGVGQDGPPGPPGPGGLPGEVGKVGPPGAMGVRGPQGPRGPQGPRGAAGMQG
TGDLCPDSCPPGTSGHPGLPGMKGHKGVKGEAGEPGKQGHKGEEGDQGSPGEVGSQGPTG
PQGLPGATGMMGSKGEMGPRGLDGDPGPQGVAGATGDQGQRGVMGESGPKGEMGAQGKRG
ITGLPGPKGEAGLPGVDGREGIPGMPGAKGSIGKAGAPGEVGLQGLPGLPGSPGPKGSGG
SKGDSGQPGLPGTMGSAGKTGERGEQGEVGPVGPIGNPGDVGEQGPEGPAGKMGARGPKG
DPGLPGLPGPPGLPGVKGERGERGESGPKGEQGVQGDEGTAGEKGDVGEPGESGAKGEVG
NPGEPGRRGPEGSRGQPGIEGPPGSPGPRGMQGNRGAPGVRGSQGPAGKEPSDQHIKQVC
MRVMQEQLAQLAASLRRPESGVAGLPGKPGPPGPPGAPGDNGFPGQAGARGLPGLKGPPG
ALGAKGPKGEMGDKGSRGPTARGPKGQPGPPGLPGEPGKPGYGQDGRDGQRGPPGSPGQP
GVPGPPGAAGPNGYCDPSACNLPAGAAHQSLDVKGPAGN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtgccctcagatcagtgtcggggaggatcgcttcccaggtttttacatcatgtcccag
ttccacattgcagagctagcaagaagaggaacagtcaaaaaggtccctggatcatctcct
cagcatgttgcttatcatataggccccgcattcaacttcaggatcaacacaagatcagcc
tatcctttgggacttccagaggagtttgcatttgcggccgtactgcgcatgagtggcagc
accatcaacaaaaaatggaacatctggcaaatgcaggatgtgaatggcaacgagcagctg
tctgtcagactcaacggacagtccaggactgtggagtttaccttcacggcgctggacggc
gggagacagactgttgtgttcagctctgtgtcgtctcttttcaatgaccagtggcacacg
gtgctgctggacgtcagcaagcgctccgtcacccttttcctggactgtgccatgatcggt
tctcagagtttaccgccacgacaggaagtcagtctggatggcttcacgttgattggaaag
ctcaaggacaactcagtgatggcagttccgtttgagctccagtcgatgctgattcactgt
gacctgacgcgagcccggtccgacgtttgccatgacctcccagccaggacatcgactgat
gtgaccgaggtgctgaggaatcaaggaactgctggccctcctggacctgcaggtgtccca
ggaattgatggcatcgctggggaaaggggagacgatggcgtggagggcccttctggacct
gatggagatgcaggtaaaccgggctcttcgggattacctggaattcctgggaacgatggt
ctgaccggccctattggagatcccgggcctgacggtccccccggacagaaaggagaacca
ggaaaacctggacctcgtggaacaactggtgttgggcaagatggaccccctggaccacct
gggcctggaggacttccaggtgaagttggaaaagttggaccaccaggggccatgggtgta
agaggaccacaaggacctcgtggaccacaggggcctagaggtgcagctggaatgcaaggc
actggcgacctgtgcccagactcttgtccacctgggacctctggacatcccggccttcct
gggatgaagggtcacaaaggtgtaaaaggtgaagcaggagaacctgggaaacaagggcac
aagggtgaggagggagaccagggaagtccaggggaggtcggatcccagggaccaacgggt
ccccaaggacttcctggagccacaggaatgatgggctccaaaggagagatgggtcctcga
ggtcttgatggagacccaggtccccagggtgttgccggggcgactggagatcaaggccag
aggggtgtgatgggcgagtctgggcctaaaggtgaaatgggtgctcaagggaagagagga
atcacaggcttgccgggtcctaaaggagaggccggcttgccaggagttgatggtcgtgag
ggtattcctgggatgccgggagcaaagggatccatcgggaaggcaggcgctccaggagag
gtcggacttcaggggcttcctggtctgcctggatcacctggaccaaaaggctcgggtggc
tctaagggagattctggtcagccgggcttacctgggaccatgggatctgcgggtaaaacg
ggtgagcgtggagagcagggagaggtcgggcctgttggacctatcggtaatcctggagat
gttggagagcaaggccccgaaggtccagctggaaagatgggtgcaaggggacccaaaggt
gaccccggcttgcctggtctccctggtcctcctggtctgcctggagtgaaaggagagagg
ggagaacgtggagagtcaggacccaaaggagagcagggagtgcaaggtgatgaaggaact
gcaggagaaaaaggagatgtcggtgagccaggagagtctggagctaaaggagaggtcggt
aacccaggagagcctggcagaagaggtcctgagggtagtcgagggcagcctggcattgag
ggcccgcctggctcacctggaccacggggcatgcagggaaacaggggagcacctggagtc
agagggtctcaaggtcccgcgggtaaagagcccagtgatcagcacatcaaacaagtttgc
atgcgagtcatgcaagaacagctagctcagttagcggctagtttaagaagacctgagtct
ggcgtggctggtttacctgggaaacctggacccccaggacctcctggagcaccaggagat
aatggcttccctgggcaggctggtgcaagaggcctccctggactcaaagggccgccagga
gctcttggagccaaaggacccaaaggtgaaatgggagacaaaggctccagagggcccact
gcaagaggacctaaaggtcagccgggacctcctggacttcctggcgagccaggcaaacct
ggctatggtcaggatggtcgagacgggcagaggggacctcctggctctcctgggcagcct
ggtgtacctggtcctcctggagcagctggacctaatggttactgtgacccgtcagcctgt
aacctcccggcaggagccgcccatcagagtctggatgtgaaaggacctgctgggaactaa
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