Cheilinus undulatus (humphead wrasse): 121511010
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Entry
121511010 CDS
T07473
Symbol
vps8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
121511010 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cud04131
]
121511010 (vps8)
Membrane trafficking [BR:
cud04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
121511010 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
Clathrin
WD40_CDC20-Fz
TPR_Vps41
TPR_VPS8_2
PHD_4
zf-RING_UBOX
zf-RING_Vps41
zf-RING_2
zf_RING_Vps8_fungal
zf-RING_11
zf-RING_5
Beta-prop_EML_2
WDR55
zf-C3HC4
Beta-prop_HPS5
EIF3I
zf-rbx1
Prok-RING_4
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
121511010
NCBI-ProteinID:
XP_041645412
LinkDB
All DBs
Position
6:3399258..3460130
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AA seq
1403 aa
AA seq
DB search
MSESPDTHSLVSASSQLNLMEVDAIDDKEFDIPQVDTPPTLESILNELEDEEEPFMLEDT
CVLNTDNIDAYSCDTSSLASSDSGDPAHLKRKRRAVDLNATVHGSVIRQSLLKGISAQIV
SAADKVDAGLPTAITVSGVIAVGTSHGLALVFDNNQALRLCLGTKTTGAEFGAVSALSIN
HDCSRLLCGFAKGQIMMWDLANGKLLRTIHDAHPPGTAILHVKFTDDPTLAVCNDSGGSV
FELVFRRVMGMRSCDSRCLFSGSKGEVCCIEPLRTPPDFRDHPITHYSLLAMASLTKILV
IGLKPSLKVWMTFPYSKSDPSSVPQLAWQFVSAQKTVNPILAFCKGDTVHFLQVKKEETG
TIHVIKQRQLHLTCDIISLSWINNRTLVLVDSQEKLQVVDRPSQEVLETLDIEQVQLVYN
SRHFKSLATGGNVSQALALVGEKACYQSVSSYGGQIFYLGTKSAHIMALRNWRERIDCLL
KQEHFIEALSLAWSFHEGTAKAVVGLFGDPVKRKAVVADKMIEVFFHFAEFALKKCPEQG
KIQVMEEHFQDVVPVLVDYCLLLKRADLLFNQLYAQLAENMVAKGVFLESLESYIVADRL
GHLTTPIMKDLLAHYQSTGKMDSLERCIVHLDVTNLDIQQVVQVCWENQLLDAMIYVFNS
GMNDFIAPMEKLFAVIGPPLRYGRSLTDEEVVMGNKLLVYISCCLAGRAYPRGDIPEDLV
IQVKNQVFEFLIRLHSADSSEEEKVFPFIRSLLHFDTREFLNVLAMTFEDFKNDKQALEY
QQRIVDILLQVMVDNPDFTPSQVGGLFTFLARQLAKPDNTLFVNRNLFDQVLDFLCCPED
DSRHTERQQVLLELLQVGGVVQYNEQRLLVLAEKAKFYQICEFLYEKNNLYDKIIDCYLR
DPLRKGEIFSYIRNLLCGPDYSPEEKQTVKDKVLQHTQELIAIDASSSAELVLFHFSEDV
QQIVSGLQDDHFLMKFLSCLLEPREGQFSEIIPPVDPELHELLLDLFCRISPQQILTFLH
TSQHYRLEEAIQITERHHENEALAFLLERKGDYQGAFTVLLETLKEKLSLLTTKTDRGGE
DENAAEEEGAGKSALIKVKDSLNNIIDLCHHSSENLYQQQREVLWFPLLETMMFSQKEVK
GLGYVHTFEVLRELTMKVLNCMSSFISLPAIIQRILQDPVYGTGKLAEIQGLILSMMDTF
NYEQTLLETTTSLLNQDLHWSLAHLHASVTKGLHPRQDYCYICLQQYKRRHDSAEKIIIF
SCGHLYHFQCLQQKNFDGGLVAELQNRWSCYKCTSSQGGRSGPAIEPKRLRSTSLAQTCI
TSAYQGAEAAAHRKKVFVDTVLNLQQEQSWDRLRCLYRGPSRLSILSELSYCRSNEKTGL
LTPGQLGTENFQLKLSPPPLLEE
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctccagacacccacagcctggtctctgcctcttctcagctcaacctaatg
gaggtggacgcgattgatgataaggagtttgacattccccaagtggacacacctcctaca
ctggaaagcatcctcaatgagctagaggatgaggaggagccgtttatgttggaggacacc
tgtgtccttaacaccgacaacatcgatgcgtactcctgtgacacctcctctctcgccagc
tcggatagtggagacccagcacacctgaaacgaaagaggagggcggtggatctgaatgcc
acagtccatgggtctgtcatacgccaaagcctgctgaagggcatctctgcacagatcgtc
tctgctgcggacaaggtggatgctggactaccaactgctataacagtgtcaggtgtgatt
gctgtgggaacgtcccatggtctggcgttggtctttgacaacaaccaggctctgcggctg
tgtctgggtaccaagacgactggagcagagtttggagcggtttctgctctcagcatcaac
catgactgctcacgacttctctgtgggtttgccaaaggacagattatgatgtgggatcta
gccaatggaaaactactgagaactatccatgatgcccaccccccaggaacggctattctt
catgtgaagttcacagatgatccaactcttgcagtttgcaatgacagtggaggatcagtt
tttgagctggttttcaggagggtgatgggaatgcgttcctgtgactctcgatgtctcttc
agtggttctaaaggagaggtctgctgtattgaaccattgcgtactcccccagacttcaga
gaccatcccattacacactactctctgttggcgatggcatctctcaccaagattttggtt
atcggcctcaagccttcacttaaagtctggatgactttcccatacagcaagtctgatcca
tccagtgttcctcagctggcctggcagtttgtttctgctcagaagaccgtcaaccccata
ctggctttctgcaaaggagacactgtccactttctccaggttaagaaggaagagacgggc
accatccatgtcatcaaacagagacagctccacctcacctgtgacatcatcagcttgagt
tggatcaacaatcgcacactggtcctggtggacagccaagagaagctgcaggttgttgac
cggcccagtcaggaagttttggagactctggatatagagcaggtgcagctggtctacaac
agccggcattttaagtccctggccactggagggaacgtctcccaggctttggctttagtt
ggagaaaaggcctgctaccagtctgtctcaagctacggagggcagatattctatttgggc
accaagtcagctcacattatggctctgaggaactggagagagcgcatcgactgtctgtta
aagcaggagcatttcatagaggctctctctctggcctggtcctttcacgagggaacggct
aaggctgtcgttggcctctttggagatccagtgaaaaggaaggcagtggtcgctgataag
atgatcgaggtctttttccactttgctgaatttgctttaaaaaaatgtccagaacaagga
aagatccaagtaatggaggaacatttccaggatgtggtcccagtcctggtggattactgc
cttctgctcaagagagctgacctgctgtttaaccagctgtatgctcagctggcagagaac
atggtagccaaaggcgtctttctggagtctctggagtcgtacatcgttgcagaccgcctt
ggtcacctcaccacccccataatgaaggacctgctggcccattaccaaagcactggcaaa
atggacagcctggagagatgcatcgtccacctggatgttaccaacctggatatccagcag
gtggttcaagtttgctgggagaaccagctccttgatgcaatgatctacgtgttcaacagt
ggcatgaatgactttatcgcaccgatggagaaactgtttgcagtgattggcccaccactg
aggtacggaaggagcctcactgatgaggaagtggtgatggggaacaaacttctggtgtac
ataagctgctgtcttgcagggagagcatacccacgaggagacatccctgaagatcttgtg
attcaagtcaagaaccaggtttttgagttccttatccgtctccattcagccgactcatcc
gaggaggagaaggttttcccatttatccgttcactcctccactttgatacgcgagagttc
cttaatgtcctcgccatgacatttgaagactttaagaatgacaagcaggccctagaatac
cagcagaggatagtggacattctacttcaggtgatggtggacaacccagacttcactccc
tcccaggtgggagggctttttacctttttggctcgccagctggccaagcctgacaacacc
ctttttgtgaacaggaacctctttgatcaggttctagacttcctgtgttgcccagaagat
gattcccgacatactgagaggcagcaggttctgttggagttgctgcaggttgggggtgtt
gtccagtataatgagcagagactgctggttttagcagagaaggccaagttctaccaaatc
tgtgaatttctctatgagaagaacaacctgtatgacaaaatcattgactgctacctgaga
gaccccctgagaaagggggagatctttagctacatcaggaatctgctgtgtggaccagac
tacagccctgaggagaaacaaaccgtcaaggacaaagtgttgcagcacacacaggagtta
atagccattgatgccagcagctcggctgaacttgtgttgttccatttctctgaagatgtg
cagcaaattgtctctgggcttcaggatgaccattttctcatgaagttcctcagctgtctc
ctggagccgagggaaggccagttttcagagatcatcccgccagtggatcctgagcttcac
gagcttctgctagacttgttctgccgcatttcccctcagcagatcctgaccttccttcac
acttcccagcactacagactggaggaggccatacaaataacagaaaggcaccacgagaat
gaggctttagcttttctgctggagaggaagggagattatcaaggagctttcacagtgttg
ttggagaccctgaaggagaagctgagtctgctcactactaagactgaccgaggaggagaa
gatgaaaatgcggctgaagaggagggagccggtaaatctgcgctgataaaagtaaaggat
tctctgaacaacatcattgacctgtgtcaccacagctctgagaacctctaccaacaacag
agagaggttctgtggttcccacttctggagacgatgatgttttctcagaaagaagtgaag
gggctgggctatgtacacacatttgaagtgctgagggagctgacgatgaaggttcttaac
tgtatgagcagtttcatttcccttcctgccatcatccaacgaatactccaggaccctgta
tatgggacaggaaaactggctgaaatccagggtctcattctgagtatgatggacactttc
aactacgaacagactctacttgaaacaaccaccagtctgttgaaccaagacctccattgg
tccctggctcacctgcatgcttcagtcacaaaaggactccaccctcgacaggattactgc
tacatctgccttcagcaatataagagaagacatgactcagcagagaagatcattatattc
agctgtggtcacctgtaccacttccagtgccttcagcagaaaaactttgatgggggttta
gtggctgagctgcaaaatagatggagctgctacaaatgtacctccagccaaggaggaagg
agtgggcctgcaattgaacctaaacgacttcgcagtacatcgctggcacagacttgtatt
acatcggcctatcagggtgcagaagcagcggctcacaggaaaaaggtgtttgttgacaca
gtgttgaaccttcagcaggaacagtcctgggatcggttacgctgcttatacagaggacca
tcaaggttgtccatcctttcagaactctcctactgccgaagcaatgagaagacggggctc
ctgaccccaggccaactgggaactgaaaatttccaactgaagctctctcctccacctctg
ttggaagagtaa
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