Cheilinus undulatus (humphead wrasse): 121511670
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Entry
121511670 CDS
T07473
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cud03009
]
121511670 (ddx10)
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121511670 (ddx10)
Ribosome biogenesis [BR:
cud03009
]
Eukaryotic type
90S particles
Helicases
121511670 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
HycH
PAS_11
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
121511670
NCBI-ProteinID:
XP_041646336
LinkDB
All DBs
Position
7:complement(45728423..45734952)
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AA seq
836 aa
AA seq
DB search
MGKKGSNSTGNKFESTLTKGIADPVKNFEKWKKKYNKTKARVKRERVQKKPEWQVEREYI
AGLVRKYEDINAKEAVKFSDFPISKKTLLGLQEAQFRQPTEIQRQTIGFALRGKDILGAA
KTGSGKTLAFLIPVLECLYRQQWSSMDGLGALIISPTRELAYQTFEVLRKVGKNHDFSAG
LIIGGKDLKNESERIHRTNIVICTPGRLLQHMDETATFHASDLHMLVLDEADRILDMGFA
DTLNAILENLPKTRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLEQNYV
VCELHQKVNMLFSFIRSHLKKKIMVFFACCKEVQYLFRAFCRLRPGIPVLALHGKQQQMK
RVEVYNDFLKKQNAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGG
EALLLLLPSEESGMVRQLQEKKVPINKIQVNSEKLQSVEQKLESFLAQEKEQKERAQRCF
VSYLRSVYLMKNKEVFDVFKLKLQEYAGSLGLAVAPRVRFLNKAQAQRAEKKGQKEEESS
EEEEEVKDFKAQLRGNIPRKDAQRSESENSSDDDEDGNDQELHQSKTLSLGADDSSEDDD
LRDFDLLTVKRKDVFNLEGDQESPESSQSLKKKVVKETKFKEAKKALKRNFQVNTKFSFN
EEGEAVQLWPPVQRKVAGEDEEEEEFSGINVEKAKERLKREDQEYDKQEYSRKVKAKHRE
QRLKAKAARREASKQRGKKSDDEEEDEVVAYLANHSDDEFDPSTLPDPDKIQSAEEEEEE
EDQTRSAKRHYRSESSDDEEEEVMVKKRKENDEHTALDTGLSLAEDEELVLHLLGR
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaagggctccaactccactgggaacaaatttgaatcaactctgacgaaaggc
atcgccgacccggtcaaaaactttgagaaatggaagaaaaaatacaacaagaccaaagct
cgggtgaagcgagagagagtccagaagaagccagaatggcaggtcgaaagggaatacatc
gccgggctcgttcgtaagtacgaggatataaacgccaaggaggctgttaaattttcagac
tttcccatttccaagaaaaccttgctgggtttacaggaggctcagttcagacagcccact
gagattcagagacagactatcggcttcgctttacgaggcaaagatatcctcggtgcagca
aagactggctctgggaagacgttggctttcctcataccggtgctggagtgtctttaccgc
cagcagtggagctccatggatggtctcggtgctctcatcatttcccccaccagagagctt
gcctatcagaccttcgaggtcctccgcaaggtgggcaagaatcacgacttctccgcgggg
ctcatcatcggcggaaaggacctaaagaacgagtcagagaggattcaccgcaccaacatc
gtgatctgcaccccgggccgactgcttcagcacatggacgagacagccacctttcacgcc
tctgacctccacatgctggttctggatgaggcggaccgcatcctggatatgggcttcgca
gatacgctcaatgccatcttggagaacctccccaagacgcgtcagacgctgctgttctcc
gccactcagaccaagtcggtcaaagacctggcccggcttagcctcaaagacccagagtat
gtgtgggtccatgagaaggccaagttcagcacaccggctacgcttgagcagaactatgtg
gtgtgtgagctccaccagaaggtcaacatgctcttctctttcattagaagccacctgaaa
aagaagattatggtcttctttgcttgctgcaaggaagtgcagtacttatttcgagccttc
tgccgcctcagacccggcatacccgttctggccttacatggcaagcaacagcagatgaag
agagtggaggtctacaatgacttcctgaaaaaacagaatgcagtcctgtttgccactgac
attgccgccagaggccttgacttcccagctgtcaactgggtgctgcagttcgactgtcca
gaggatgcagacacctacatccacagggtgggacggactgcaagatacaaggagggtgga
gaggctctattgctgctgcttccctcagaagagtctggcatggtgagacagctgcaggag
aagaaggtgcccatcaataaaattcaggttaattcagaaaaactgcagagtgtcgagcag
aagctggagtccttcctggcccaggagaaggagcagaaagagagagctcaaaggtgtttt
gtttcctatctgcgctctgtttacctgatgaagaacaaggaggtgtttgatgtcttcaaa
ctcaaacttcaggagtacgccggctctcttggcctagctgtggctccaagggtgcgcttc
ttaaataaagctcaggcacagagagctgagaaaaaaggacaaaaagaggaggagtcatct
gaagaagaggaagaggttaaggactttaaggctcagctgagaggaaacattcctcgtaag
gatgctcaaaggtcagagtccgaaaattcaagcgatgatgacgaagatgggaatgatcaa
gagctgcatcagtctaaaacactttctctgggagcagatgacagcagtgaggatgatgat
ctaagagactttgacctccttacggttaaaaggaaggatgtcttcaatctggaaggggac
caggagagtccagaatcttcccagtccttaaaaaagaaagtggtaaaggagacaaagttt
aaagaagccaaaaaggccctgaagagaaactttcaagtaaacaccaaattttcctttaat
gaagaaggagaagctgtacagctgtggcctccggtccaaaggaaagtggcaggtgaggat
gaagaggaggaagagttttctggtataaatgtagaaaaggccaaagaaaggctgaaacgt
gaggaccaggagtacgacaagcaggagtacagccgcaaagtgaaagccaaacacagggag
cagaggctgaaggctaaggcagccagacgagaggccagcaagcagcgtggaaagaaatct
gacgatgaagaggaggatgaggtagtggcctacctggccaatcacagcgatgatgagttt
gatcccagcaccttgccagacccggataaaatacagtcagctgaggaggaagaggaggag
gaggatcagacgaggtcagctaagcgacattatagaagcgagagcagtgatgatgaagag
gaggaggtcatggtgaagaagaggaaggagaatgatgaacacacagccttggacactgga
ctctctttggctgaagatgaagagttagtcttacatctgcttggaagataa
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