Cheilinus undulatus (humphead wrasse): 121512145
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Entry
121512145 CDS
T07473
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cud03000
]
121512145 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cud03310
]
121512145 (rorca)
Transcription factors [BR:
cud03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121512145 (rorca)
Nuclear receptors [BR:
cud03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121512145 (rorca)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Bystin
Motif
Other DBs
NCBI-GeneID:
121512145
NCBI-ProteinID:
XP_041647170
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Position
7:complement(31323308..31337797)
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AA seq
474 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQECAGVGAQEENGDLAD
LGRNYRRGSSTALSDLDDITTLPEGLLFDLPLTPEDAGGEYCSLDMLGGSAGSGSSSQSS
PEQTNLDFVDGNHSIKHEYQLLHDSGLFSHAILNPLPEGCSLHEIERITQSVVKSHIETS
QYSTEELKRMAWTLYSPEETRSFQTKSAEVMWQKCAIHITNAIQYVVEFAKRISGFMDLC
QNDQIILLKAGCMDVLLIRMCRAYNPINNTLLFDGKFAIAQLFKALGCDDLVNAVFDLAK
SLSRIQMSEEEMALFSAAVLLSPDRPWLTDVQKIQKLQERVYTALQRCLQKEGAPDEKLA
KMVSKLPTMKSICNLHIDKLEFFRLVHPETAYTFPPLYREVFCSEITFPDSTEG
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaggtgattccctgcaaaatctgtggggacaaatcttcagggatt
cattatggtgtcattacatgtgaaggctgcaagggtttttttcgccgcagccagcagaac
aatgcgatgtactcctgctcaagacagagaaactgtctaattgaccggaccaaccgaaac
cgctgccagcactgtaggctgcagaagtgtcttgctctgggcatgagccgagatgccgtc
aagtttggccgaatgtccaaaaagcagcgtgacagcctgtacgcagaagtccagaaacac
cagcagtcccaggagtgtgcgggtgtaggtgctcaggaggagaacggcgacttggcagac
cttggccgaaactacagaaggggctccagcactgcactcagtgatctggatgacatcact
acgctgccagaagggctcctctttgacctgccacttaccccagaggatgcaggaggagag
tactgcagtctggacatgctgggcggtagtgcaggcagtggttcatcctcacagagctca
cctgaacagaccaatttggactttgtagatggaaaccacagcatcaagcacgagtaccag
ttgttgcacgactccggactcttctcacatgctatcctcaacccactccctgagggctgc
tccttgcatgaaatagagcgtataacccagagtgtggtgaagtcccatattgagacaagc
cagtacagcacagaggagctgaagagaatggcatggaccttgtatagcccagaagagacc
cgctctttccagaccaagtcggctgaggtaatgtggcagaaatgtgccattcacatcact
aacgcaatccagtatgtggttgagtttgccaagcgcatctctggcttcatggatctctgt
cagaatgaccagatcatcctcctcaaagcaggctgcatggatgtcctcctgatccgtatg
tgtcgggcctacaaccccatcaataacactttgctctttgatgggaagtttgccatcgct
cagctctttaaagctcttggctgtgacgaccttgtgaatgcagtttttgacctggctaaa
agtctgagccgtatccagatgtcagaggaagagatggctctcttcagtgctgctgtgctt
ctctcaccagaccgaccctggctcaccgatgttcaaaagatccagaaactacaggagaga
gtctacacggccctgcagcgctgcctacaaaaagagggtgcaccagatgagaagctagct
aagatggtgtcaaagcttcccaccatgaagtcgatctgcaacctccacattgacaaactg
gagtttttccgcctggttcaccctgagacagcatacacctttcctcctctgtatagggaa
gtcttttgcagtgaaatcacctttccagactccacagagggctag
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