Cheilinus undulatus (humphead wrasse): 121512171
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Entry
121512171 CDS
T07473
Symbol
pdgfra
Name
(RefSeq) platelet-derived growth factor receptor alpha
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04010
MAPK signaling pathway
cud04020
Calcium signaling pathway
cud04144
Endocytosis
cud04510
Focal adhesion
cud04540
Gap junction
cud04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121512171 (pdgfra)
04020 Calcium signaling pathway
121512171 (pdgfra)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121512171 (pdgfra)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121512171 (pdgfra)
04540 Gap junction
121512171 (pdgfra)
09142 Cell motility
04810 Regulation of actin cytoskeleton
121512171 (pdgfra)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cud01001
]
121512171 (pdgfra)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cud04090
]
121512171 (pdgfra)
Enzymes [BR:
cud01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
121512171 (pdgfra)
Protein kinases [BR:
cud01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
121512171 (pdgfra)
CD molecules [BR:
cud04090
]
Proteins
121512171 (pdgfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
VEGFR-1-like_Ig-like
V-set
C2-set_2
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
121512171
NCBI-ProteinID:
XP_041647239
LinkDB
All DBs
Position
7:49098556..49134452
Genome browser
AA seq
1463 aa
AA seq
DB search
MDGVKAYVVFGGILVALVSVTSGLSPPTIVSNQDEFILQPNSVFNISCTGKRNVIWADPL
PKNTFVLPGFLTATLFIYNATVDHTGYYMCAYESQEGEPEDNEAGIYVFVPDLQAPFVPE
MPENLVVPMDDPGVLISCRVSDPNTHVVLRSVPGGEEMQAYYDSKMGFFGSLMPGQYQCE
TVVNGETIRSVVYTVETEAPADMEDFDVEVKSSEETVRARQPFNITCIAPAGPGFQQQWL
HPKKQAVGAVQMKHALPDRVIYILSVTQTSSQDSGTYECSITNQINGEVRVGSVAVTVFD
DNSYVALDHSGILATEFVSLLEETEFTIFITGYPAPKVMWLKDGKPIPENYYVLTKTSHT
EGNRYQSILTFRQPLFKDDGNYTITAVSGSRTAQFSFSLKVKAPTSAMFPPSSAPVLLPQ
VEELVVPLHTPFTLTCRGEAKLAWETPLDVPEKTQEDNSGLFVTTITVDNATAMHTGYYI
CFYSRNDTDEGEDSSIYIYVPDPDVPFVPSPVPFGNHVLSDHEEMEIQCRVSDPSANVTL
VNVDTLEPVPSVYDSKRGALGVFTAGTYVCKALINGEVHYSGEYIVHGWTGGAALHVELT
AKRTALFVGETLTVTCLARGSEILEDHWKYPGKLANRAVKTVHENKRDQEILYTLTIPQA
SSKDSGIYSCSITDIISNESQTKQLAIQVYAGEFLSIRPEFKEYESAELDEVREFKALIS
AFPNAQVTWLKDGVPLNDVTAEISTSLRQLSETSYMSVLTLIRAKEEDSGNYTMRVENGD
QRSSVGLMLEVKVPAVIVDLMDIHHGSASGQSVVCISRGQPMPVVEWFICKNIKHCANDT
SSWVPLPANSTEITVDSHMDEDNNLESQVMFGHLENTLAVRCLARNEMAAVSREVKLVSN
GPHPELTVAAAVLVLLVIVIISLIVLVVIWKQKPRYEIRWRVIESVSPDGHEYIYVDPMQ
LPYDSRWEFPRDRLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQ
ALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRENFLSLNPE
KSKKELDIFGINPADESSRSYVILSFESKGDYMDMKQADNTQYVPMLEMSNASKYSYIQR
SDYDHPPSQKGSEMDDLLSDDMNEGLSTTDLLSFTYQVAKGMEFLASKNCVHRDLAARNV
LLSQGKIVKICDFGLARDIMHDNNYVSKGSTFLPVKWMAPESIFDNLYTSLSDVWSYGIL
LWEIFSLGGTPYPGMVVDSSFYNKIKSGYRMSKPEHAPHDVYEMMMKCWNSEPEKRPSFL
GLSETVAALLPSSYRRHYERVNHEFLKSDHPAVTRVCMENDDAYIGITYKNQGKLKDRES
GFDEQRLSSDSGYIIPLPDLDPISDDEYGKRNRHGSQTSEESAIETGSSSSTFAKREGET
LEDITLLDEMCLDCSDLVEDSFL
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtaaaggcgtatgtcgtctttggaggaatcttggtggcgctggtttcagtg
acgtctgggctctcaccaccaaccatcgtgtccaatcaggacgagttcattctgcagcca
aactcagtgttcaacatcagctgtaccgggaagagaaacgtaatctgggccgaccccctc
cccaaaaacacctttgttttgcctggtttcttaacagccacactttttatttacaacgcc
actgtggatcacacgggttactacatgtgtgcctacgagagccaggagggagagccagaa
gacaacgaggctgggatatacgtctttgttccagatctgcaggctccgtttgtccctgag
atgcctgagaacctggtcgtccccatggacgatcccggtgtcctcatctcctgcagagtg
tctgacccaaacactcatgttgttctgaggagcgttccaggaggagaagaaatgcaggca
tactatgacagcaaaatgggcttctttggcagcctgatgcctggacagtaccagtgtgaa
actgtggttaatggagagacaatcagaagtgtggtttataccgttgagactgaggccccc
gcagacatggaagactttgacgtggaagtaaaaagcagcgaggagacagtgagagccagg
cagcctttcaacatcacatgtatcgctccagccggaccgggcttccagcagcagtggctt
catccgaaaaaacaggctgtgggtgcagttcagatgaaacacgcgcttccagaccgagtg
atctacatcctgagtgttacacaaacctcctcccaggacagcggcacttacgaatgctca
attaccaaccagataaatggggaggtcagagtcggcagtgtggctgtaactgtatttgac
gacaactcctacgtggccctggatcacagcgggatcttagcaacagagttcgtcagcctt
ttggaggagactgagttcaccatctttattactggctacccggcccctaaagtgatgtgg
ctgaaagatgggaaacccattccagagaactactacgtcctcaccaaaaccagccacact
gaaggcaataggtatcaaagtattttgacgtttaggcaaccactgttcaaagatgatggg
aattacaccatcactgcagtcagtggctctcgcactgctcagttctcctttagcctcaaa
gtaaaagcccccacttcagcgatgttccccccgtcctcggctccggtgcttctacctcag
gtggaggagcttgtggttcccctccatactccgttcaccctgacctgtcggggagaggct
aagctggcctgggagaccccactggatgtccctgagaagacccaggaggataacagtggc
ctgtttgtcaccaccatcactgtagacaatgccaccgccatgcacacaggctactacatc
tgcttctacagcaggaacgacacggacgagggagaggatagtagcatctacatctatgtg
ccagatcctgatgttccctttgtaccatctccggtaccttttgggaaccacgtcctctcc
gaccacgaggagatggagatccagtgtcgggtgtctgatcccagcgctaatgtgaccctg
gttaacgttgacacgctggagcctgtgcccagtgtttatgacagcaagaggggtgctctg
ggagtgttcacagctggaacgtatgtctgcaaggccctcataaatggagaggtgcactac
agcggggaatacattgtccacggctggacaggtggtgcagccttgcatgttgagctgacg
gccaaacgcactgctctgttcgtgggagaaaccctcactgtcacctgtctcgctcggggg
tctgagatcctggaagaccactggaaatatcctggcaaactggccaatcgtgctgtcaaa
acggtgcatgaaaacaagagggaccaggagatcctctacacgctcacaatccctcaggct
tcaagtaaagacagcggcatctactcgtgctccattacagatatcatcagtaacgagagt
caaacgaagcagctagctatccaggtttatgctggggagtttctgtccatccggccagag
tttaaagagtatgaatctgcagagctggatgaggtccgtgagttcaaagctctgatcagc
gcctttccaaacgctcaggttacctggctgaaagacggtgtcccgctgaacgatgtgacg
gcggagatctccaccagcctgcggcagctcagtgagaccagctacatgagcgttctcacc
ctgatccgggccaaggaggaggacagcgggaactacaccatgcgcgtggagaatggagac
cagaggagcagtgtaggattgatgctggaggtcaaagtgcctgcagtcatcgtggacctg
atggacatccaccacggctcggcctcggggcagtctgtggtgtgcatctcccgggggcag
cccatgcctgtagtggagtggttcatctgcaagaacatcaaacattgtgccaatgacacc
tcctcctgggtgcccctccccgccaactccactgagatcaccgtggactctcatatggat
gaggacaacaacctggagagccaggtcatgtttggtcacctggagaacacactggccgtg
cgctgcctcgccaggaacgagatggcggccgtgagcagggaggtcaaactggtgtccaat
ggcccccaccccgagctgactgtagccgcggctgtgctggtgctgctcgtcattgtcatc
atctcactcattgtgttggttgttatttggaagcagaaaccccggtacgagatccgctgg
agggtcattgagtctgtcagcccagacggtcatgagtacatctacgtggatcccatgcag
cttccctatgactcccgatgggagttcccccgtgacagactggtcctgggtcgtattttg
ggatccggagcctttgggaaggtggtggaaggcaccgcctacggactgagccgctcccag
ccagtcatgaaggtggcagtgaaaatgctgaaacccacagctcgctccagtgagaaacag
gccctgatgtctgagctaaagatcatgactcatctcggaccacatctcaacatcgtcaac
ctgctgggagcatgcaccaagtcaggccccatctacataatcacagagtactgcttctac
ggagacctggtcaactacctgcacaagaaccgggagaacttcctcagcctgaacccagag
aagagtaaaaaggagctggatatctttggaatcaacccagcagacgagagcagcaggagt
tatgtgatcctgtcctttgagagtaaaggagactacatggacatgaagcaggctgacaac
actcagtacgtccccatgctggagatgagcaacgcctcgaagtactcttacatccagagg
tccgactatgaccacccgccatctcagaaagggagcgagatggatgacctgctgtcagat
gacatgaacgagggcctgtccaccaccgacctgctcagttttacctaccaggtggccaaa
ggcatggagttcctggcctccaagaattgtgtgcatcgagacctcgctgcaagaaacgtg
ctactctctcaaggaaagatagtgaagatctgtgactttggactggcccgggatatcatg
catgacaacaactacgtctccaaaggaagtactttcctaccagtgaagtggatggcacca
gagagtatttttgacaacctttacacatccctcagtgatgtttggtcctatggcatcctg
ctctgggagatattctccttaggtgggactccctaccctgggatggttgtggattcaagc
ttctacaacaagatcaagagtggatacaggatgtccaaaccagagcatgcaccacatgac
gtgtatgagatgatgatgaagtgctggaacagcgagccagagaagaggccatccttcctg
ggtctgagtgaaactgtagctgctctgctgccctccagctacaggaggcattatgagcgg
gtgaaccatgagttcctaaagagcgaccaccctgccgtgacccgggtctgcatggagaat
gacgacgcctacattggcatcacttacaagaaccaaggcaagctgaaggaccgggagagc
ggcttcgacgagcagcggctgagctctgacagtggctacatcatccccctcccagacctg
gacccgatatctgacgatgaatacggaaagaggaacagacacggctctcagacatccgag
gagagcgccattgagactggctccagcagctccacttttgccaagcgtgagggtgagact
ctggaggacatcacgctgctggatgagatgtgtctggactgtagtgacctggtagaggac
agcttcctgtga
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