Cheilinus undulatus (humphead wrasse): 121513377
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Entry
121513377 CDS
T07473
Symbol
cnot3a
Name
(RefSeq) CCR4-NOT transcription complex subunit 3a isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121513377 (cnot3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121513377 (cnot3a)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121513377 (cnot3a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121513377 (cnot3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
121513377
NCBI-ProteinID:
XP_041649037
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All DBs
Position
8:31138531..31151932
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AA seq
917 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVAEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQRE
KEETGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKEKQDRIDELKRLIERHRFHI
RMLETILRMLDNDSIPVDAIQKIKDDVEYYIDSSQDPDFEENEFLYDDLDLEDIPAALVA
TSPSGQGNVEDEMYLHSSSTPTSTTSSSPIPPSPATCTAENSEDDKKRGRSTDSEVSQSP
VKNGTPSLLSSFSSSTTSGSSSSSSLVSMASVVGGISAVPTSSSLIGSFSSAVQQHQHPP
AQQQQQPQPPNQPQQQQQQQQQQQPPQTKPTVPSNNTPSPPSNPLLPASTAPSLPTPSTP
ISSAPNSQPQPTSGPTPASSLGLGLGLGLGKVGMTGTSSASQMSGLGLGGHPTPLNTIAG
LISGSTPAPYAQAAAPGGLGLNSTTQSSISADSSTSIPTSGSSGVTTNGAGTGLGLLGSS
PAHSSLSGSILGLVPGPNVAPGASQVPPSSVSSTSGVVAMMGGNGGSVGVVGGVGVNAAP
ARPPSGLKQNGSTSYSAVVAESSTESALSTPSQSQSSQPSSLSSSTSQPMDNGPSLISSI
TLPPSSPSPSFSDTTPGGGSLLNGPHSYTQASEGLKAPEPLSSLKAMAERAALGSGLDGE
IPNLHLTDRGRNDIFSGSSAAPGTPAAPQPSVSEVSIPPSLGVCPLGPTPLPKDQLYQQA
MQESAWTHMPHPSDSERIRQYLMRNPCPTLPFHHQIPPHHSDSIEFYQRLSTETLFFIFY
YLEGTKAQYLSAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRK
KEGFTFEYRYLEDRDLQ
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagaaaacttcaaggtgagatcgacagatgtttgaaaaaagtagctgaa
ggtgtagaacagtttgaagacatttggcaaaagctccataatgcagccaatgcaaaccag
aaggaaaaatatgaggctgacctcaaaaaagagattaaaaaactacagcgattgagagat
cagataaaaacatgggtggcctcaaacgaaatcaaagacaaacggcagctagtcgagaac
cgcaaactaatagagacgcaaatggagcggttcaaggtggtagaacgggaaacaaaaaca
aaagcctactctaaagaagggttagggcttgctcagaaagttgatccagctcagagggaa
aaggaggaaacgggacagtggctaacgaatacgatagacactctaaatatgcaggtggat
cagtttgaaagtgaagtggaatctctctcagttcaaacaaggaagaaaaagggtgataaa
gagaaacaagatcgtattgatgagctcaagcggttaattgagaggcatcgattccacatt
cgaatgttggaaaccattttacgaatgctggacaatgactcaataccggtggatgcaatc
cagaagatcaaagatgatgttgaatactacatcgattcctctcaagacccagactttgag
gagaatgagttcctgtatgacgatttggacttggaagacatccctgcagcgttagttgca
acgtctccgtcaggtcagggtaatgtggaagatgagatgtatctccactccagcagcact
cccacttccaccacctcctcttcacccatccctccatccccggccacttgcactgctgag
aactcagaggacgataagaaaaggggacggtcgacagacagtgaagttagtcagtcacct
gtgaagaacggcacaccatccctgctatcttccttctcctcctccaccacctctgggtcc
tcctcgtcgtcctcccttgtgtctatggcgagcgtagttggaggcatttctgcggtgccc
acaagcagcagcctcatagggagtttcagcagcgcagtgcagcaacatcagcatccacct
gcgcaacagcagcaacaacctcagccaccaaaccaaccacagcagcagcagcaacagcaa
cagcagcagcagccacctcagacaaaacctactgtcccctcaaacaacacccccagccca
cccagcaaccctctcctccctgcctcaactgccccctctctccccacacccagcacgccc
atttcatcagctcccaactctcagcctcagcccacatctgggcccacacctgcatccagt
ttgggacttggtcttgggctgggattgggcaaagttggcatgacggggaccagcagcgcc
agccaaatgtctggtttaggtttaggaggccaccccactcctctaaacacaatagcaggg
ctcatttcaggctctacacctgccccatatgctcaggcagcagcaccaggaggcttgggt
ctgaacagcaccacccagtccagcatttcagcggacagcagcacttccatccccacctct
ggctccagtggagtcaccaccaatggggcggggacggggctcggtctgctgggctccagt
ccggcccacagctctttgagcgggagtattttagggctggttcctgggccaaatgtagcc
ccaggtgcctctcaggtgcccccaagttctgtcagcagtacttccggggtagtcgccatg
atgggaggcaacggagggagtgttggtgtggtcggaggagtaggggttaacgctgctcct
gctagaccacccagtggactcaagcaaaatggaagcacaagttacagtgctgtagtggca
gagagctccacagaatcagctctaagcacaccgagccagtcacaaagcagccagccgtca
tctctcagttcttcaaccagtcagccgatggacaatggccccagtttgatcagctctatc
actctgcctcccagctctccgtccccctcattttctgacaccacacctggaggagggagt
cttctcaatgggcctcactcctacacacaggcctcagaaggcctaaaggctcctgagcca
ctcagctctctgaaggcgatggctgagagggcagcgctgggttcaggcctggatggagag
attcccaacctgcacctaacagacagaggtcggaacgatatcttctccggctcctctgca
gcgcctggtacacccgcagcccctcagccgtccgtgtcggaagtcagcatccccccctcg
ctcggggtctgtccgcttggccccacccctctcccaaaggaccagctgtaccagcaggcc
atgcaggagtctgcgtggacacatatgccacacccctccgactctgagaggatcaggcaa
tacctgatgaggaatccctgtcccaccttgccgttccatcatcagataccaccacaccat
tcagactctatagagttctaccagagactgtccacagagactctcttcttcatcttctac
tacctggagggcaccaaggctcagtatctgtctgccaaggctctgaagaaacagtcgtgg
aggtttcacaccaagtacatgatgtggttccagaggcacgaggagcccaagactatcact
gatgagtttgaacagggcacttacatttactttgactatgagaaatggggccagaggaag
aaggagggatttacctttgagtacaggtacctggaagaccgagacctgcagtga
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