Cheilinus undulatus (humphead wrasse): 121513680
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Entry
121513680 CDS
T07473
Symbol
u2af2a
Name
(RefSeq) U2 small nuclear RNA auxiliary factor 2a isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121513680 (u2af2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cud03041
]
121513680 (u2af2a)
Spliceosome [BR:
cud03041
]
Complex A
U2 snRNP components
U2 related factors
121513680 (u2af2a)
Complex B
121513680 (u2af2a)
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Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
RRM_occluded
DUF8489
RRM_7
Transformer
F07F6_N
Motif
Other DBs
NCBI-GeneID:
121513680
NCBI-ProteinID:
XP_041649522
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Position
LG8
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AA seq
476 aa
AA seq
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MSDFDEFERQLSENKQAERDKENRHHRRSSSRSRSRERKRRSRDRDRRSRDRRGDSKERR
HRRSSPSSYPQDNAGSRSPHREKKKKVKKYWDVPPPGFEHITPMQYKAMQAAGQIPATAL
LPTMTPDGLAVTPTPVPVVGSQMTRQARRLYVGNIPFGITEESMMDFFNAQMRLGGLTQA
PGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYQPLPGMSEN
PSVYVPGTQTINGVVSTVVPDSAHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSA
TGLSKGYAFCEYVDVNLNDQAIAGLNGMQLGDKKLLVQRASVGSKNATLTSINQTPVTLQ
VPGLNSSVTQMGGLPTEVLCLMNMVAPEELLDDEEYEEIVEDVRDECSKYGQVKSIEIPR
PVDGLEVPGTGKIFVEFMSVFDSQKAMQGLTGRKFANRVVVTKYCDPDAYHRRDFW
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggactttgacgaattcgaaagacagctatccgaaaacaaacaagctgaaagggac
aaagagaaccgccaccatcgccggtcctcctcccgcagccgcagcagagagaggaaaagg
aggagcagagacagggatagacgcagcagggaccgccgtggggacagtaaggagcgcaga
catagacgcagctcaccatccagctaccctcaagacaatgctggaagccgctctccacac
cgtgagaagaagaagaaggtcaagaagtactgggatgtccctccacctggttttgaacac
attacccccatgcagtacaaagccatgcaagctgcaggccagatcccagccacagccctc
ctgccgaccatgactccagatggcctggctgttacccccacccctgtacctgtagtgggc
agccagatgacccggcaggcccgtcggctctatgtgggcaacatcccatttggtatcaca
gaggagtccatgatggacttcttcaatgcccagatgcgtttgggtggtcttactcaggcc
cctggaaatcctgtccttgcagtacagatcaaccaggataagaattttgccttccttgag
ttccgttcagtggatgaaacgactcaggccatggcctttgacggcattatatttcaaggc
cagagtctcaagatccgtcgtccccacgattaccagccgctgccagggatgagtgagaac
cccagtgtctatgtgcctggtacacagacaattaatggtgtggtctccacagtggtgcct
gactcggctcacaaactcttcatcggcggcttgcccaactacctgaatgatgatcaggtg
aaggagttactgacgtcatttggccccctgaaggccttcaacctggtgaaggacagtgct
acaggcttatctaaaggatacgccttctgtgaatatgttgatgttaaccttaatgaccag
gccatagctgggctgaacggcatgcagctgggagacaagaaactgctggtgcagagggcc
agcgtgggatctaagaacgctactctgacaagtataaaccagaccccagtgacactgcag
gtgccggggctgaacagctcagtgactcagatgggtggcctgcctacagaggttctgtgt
ctgatgaacatggtggccccagaggagctgctggatgatgaggaatacgaggagatcgtg
gaagacgtcagggacgagtgcagcaagtacggccaagtgaagagcattgagatacctcga
cctgtggacggcctggaggttcctggcaccggcaagatctttgtggagttcatgtcagtc
ttcgactcccagaaggccatgcagggactgactggaaggaagtttgccaacagggtggtg
gtgaccaaatactgcgatccggatgcttatcaccgccgggacttctggtag
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