Cheilinus undulatus (humphead wrasse): 121514541
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Entry
121514541 CDS
T07473
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121514541 (lrrc4ca)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
V-set
LRR_14
Ig_2
LRR_9
LRRNT
DUF4293
Ig_6
Sp38
DUF7617
DUF6821
Syndecan
Motif
Other DBs
NCBI-GeneID:
121514541
NCBI-ProteinID:
XP_041650624
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All DBs
Position
9:complement(31826723..31921759)
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AA seq
648 aa
AA seq
DB search
MLNKMTSSQQQQMMRGPRWNRAFSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRKIELGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLVKLDELEMSGNQLSIIRPGSF
KGLIHLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTLLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTHHRGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGSAAELRCRASSLTSVSWITPNGSIMTHGAYKVRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASATLNVSSTENSSFSYFTTVTVETIETPHNEAYTTVQQKVTPT
PSAGTWDSVSPTSTTTTTTTVRTPFITHTTEKTTTISVTEVGGEGSLNGLDEVMKTTKII
IGCFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPGMEGHLTLP
PLEHEHLNHYNTYKTAYNHATINSIHSSVHEPLLIRASSKDNVQETQI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacaagatgacctcctctcagcagcagcagatgatgcgaggtcctaggtggaac
cgggccttttccgaccctttgtttgtgctgcttctggccctccagctgcttgtggtggca
gggctggtacgtgctcagacgtgcccctccgtctgctcctgcagtaaccagttcagcaaa
gtcatctgcaccaggcgaggcctgcgggaagtccctgatggcatctcgaccaacacgcgc
tacctgaatctgcaagaaaatctcattcaggtcataaaggtggacagcttcaagcacctg
agacatttggagattttgcagctgagcaaaaaccacatacgcaaaattgagctgggagca
ttcaatggactggccagcctcaataccctggagctttttgataatcgcctcaccactatc
ccaaatggggcgtttgagtacctgtccaaactaaaggagctctggctgagaaataacccc
atagagagcattccctcctatgctttcaacagagtgccctcattgcggcgcttggacctt
ggggagctcaaacggctctcctacatctctgagggagcatttgaagggctgagcaatctg
cgctacttaaacctgggaatgtgcaatctgaaagaaattcctaaccttattcccctggtg
aagctggatgaacttgagatgtcgggtaaccagctatccatcatccgacccggctctttc
aaagggcttatccacttgcagaagctatggatgatgcacgcccagatccagactatagaa
agaaactcttttgatgacctgcagtcattagtggagctaaatctagcccataacaacctc
accctcttgccccatgatctcttcactcctttacatcgcctggagagggtacatttgcac
cacaacccgtggaattgtaactgtgacattctctggttaagctggtggctaaaggagatg
gtaccagcaaataccagctgctgcgcccgctgtagctcaccaacccaccataggggacga
tacatcggtgagctggaccagaactactttcactgttatgctcctgttattgtggagcct
cccgcagatctaaatgtgacagagggaagcgctgcagagttgagatgcagagcaagctcc
ctcacctctgtaagctggattacacccaatggttccatcatgacacacggtgcgtacaag
gtcagaatctctgtgctgaatgatggcactctgaacttcaccaatgtcaccatgcaggac
actggtacatatacatgtatggtcagtaactctgcaggtaacacaacagcatctgccacg
ctcaatgtgtcgtccacagagaacagcagcttcagctacttcaccactgtcacagtggag
actatagagacgccgcataatgaagcctacaccactgtgcaacagaaggtgacccccacc
ccatctgctggtacatgggacagtgtttcacccacttctacgaccaccacgacgaccacg
gtccggaccccgtttatcactcacaccacagagaagactacaaccatctctgtgacagag
gttggcggggagggttcactgaacggcctggatgaggtgatgaagacgactaagatcatc
atcggctgctttgtcgccatcacactcatggcagctgtcatgctgatcatcttctacaag
atgcgcaaacagcaccaccagcagaaccaccacgcacccacacgcactattgagatcatc
aatgtggatgaggactgtgtaacaggtggcccaggcatggagggccacctgacactgcct
cctcttgagcacgagcacctcaaccactataacacttataagactgcatacaaccatgcc
actatcaactccatacacagctcagtgcacgaacctttgttaatccgggccagttcaaaa
gacaacgtacaagagacccaaatctaa
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