Cheilinus undulatus (humphead wrasse): 121514630
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Entry
121514630 CDS
T07473
Symbol
ighmbp2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cud03009
]
121514630 (ighmbp2)
03012 Translation factors [BR:
cud03012
]
121514630 (ighmbp2)
Enzymes [BR:
cud01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
121514630 (ighmbp2)
5.6.2.5 RNA 5'-3' helicase
121514630 (ighmbp2)
Ribosome biogenesis [BR:
cud03009
]
Eukaryotic type
Other ribosome biogenesis factors
121514630 (ighmbp2)
Translation factors [BR:
cud03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
121514630 (ighmbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_19
AAA_30
zf-AN1
DEAD
Viral_helicase1
nSTAND3
AAA_16
AAA_22
ResIII
UvrD-helicase
SLFN-g3_helicase
IstB_IS21
Flavi_DEAD
DnaB_C
Helicase_RecD
AAA_25
PhoH
AAA
SRP54
ABC_tran
AAA_31
HEM4
Zot
ATPase
AAA_18
NPHP3_N
SpoIIAA-like
Motif
Other DBs
NCBI-GeneID:
121514630
NCBI-ProteinID:
XP_041650769
LinkDB
All DBs
Position
9:22189072..22198829
Genome browser
AA seq
984 aa
AA seq
DB search
MAVEQFVSKTLELLQEEREAEIEETRIWQENISLKDLQNKGVCLLKLQIGSQSTGLYGRT
VVTLQPRKHLGFLSLPSNSFGPGDIVGLYDTGGCSAAAQIGTGIVTRVSQAFISVAFDDS
KDGLSFDDDALYNLLKLANDVTYKRMKQALNALNGYSNGPAGNLISVLFGDTKPSSQSQP
NEVDFFNPNLDDSQRDAVSFALSQRELAVIHGPPGTGKTTTVVEIILQAVKQGQKVLCCA
PSNVAVDNLVERLAQCKAKVLRLGHPARLLESIQKHSLDAVLAQSDNANIIADIRKDMDK
AFMGMKKMHEKGERGNLRREIGELRKELKTREAAAITQILKSADVVLSTNTGACADGPLK
FLPAEHFDWVVIDECAQALESSCWIALLRARKCILAGDYKQLPPTIKSQTAASKGLSLSL
MERLIQMYGDSVVRMLTVQYRMNSAIMEWASKEMYQGRLTAHSSVKGHLLKDLPRVSCVE
ETSTPLLLIDTAGCGLNEMEVADEQSKGNQGEVDIVDLHIKALTEAGLKAKDIAVIAPYN
LQVDLLRQRLSARHPELEIKSVDGFQGREKEAVVLSLVRSNRKGEVGFLAEDRRINVAVT
RARRHIAVVCDTQTVQNHLFLKSLITHMTEFGEVRTAFEYIQDIVPQNYTRDHKDTKPNT
SSSSSNTKQKVKQPPPSKGKQGQMSSDKNTATKKQTASFETAQREEEQKKNRHAEIREQV
ENFLKDLNQNELQFPSSFNSHDRLLVHQIAEELGLVHESKGEGKDRCITVSRPVQSSPAE
EQNQEAENTQEEETVQNPQTELLSQLPLDLKSLHLERMKREQQKREENSQQKKQQGNIPA
AQSQSSKKQKSAKGKSRTKAGACDIATAAAPDDDFDALINAVKKADSVCSFVKCKASVLT
LGQLCLFCNRQFCLSHHIPEVHGCGDKAKSHARMRISKEGVLYAGSGKKDKSMDPNKKAY
LQRKLDSKLKDMASQRRPKTKEDS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atggctgttgaacagtttgtctcaaagacacttgagcttttacaagaggaaagggaggct
gaaatagaggagaccaggatatggcaggagaacatctctctcaaagatcttcaaaataaa
ggggtttgcctgctgaagctgcagattggaagtcaatctacgggcctttatggtcgcaca
gttgtcacccttcagcccaggaagcatcttggtttcttatctctgccaagcaacagtttt
gggccaggggacatagttggcttatatgacacaggcggatgctctgcagcagcacaaatc
ggcacgggaatagtgacaagggtcagccaggcctttataagtgtggcatttgatgattca
aaggatggcctcagctttgatgatgatgctctttacaacctcttaaagttggcaaatgat
gtcacgtacaaacgaatgaaacaggccctgaatgcattaaacggatacagtaatggacca
gctggcaatctgataagtgttctgtttggagacacaaaaccttcctctcagtcacagcca
aatgaagtagatttttttaaccccaacctggatgactcccagagagatgctgtgtccttt
gctctgtctcagagagagctggctgtgattcatggaccaccaggcactggcaaaaccacc
acagtggtggagatcatcctccaggctgtcaaacaaggtcaaaaggtcctgtgctgtgcc
ccttctaatgtggctgtggataacttggttgagaggttagctcaatgcaaagcaaaggtc
ctgagactgggtcaccctgccaggctgctggagtccattcagaaacactcgctcgacgct
gtccttgctcagagtgataacgcaaacatcatcgctgacattcgtaaagacatggataaa
gcttttatgggaatgaagaagatgcatgaaaaaggagaacgagggaacctcaggagagaa
ataggggagctaagaaaagaactgaaaaccagggaagcagcagccatcacgcagatccta
aaaagtgctgatgttgttttatcaaccaatacaggcgcttgtgctgacggccctctaaag
ttcctgccggcggaacattttgattgggtggtgatagacgagtgcgctcaggccttggag
agcagctgctggattgctcttctcagagcacgcaagtgcattctggctggagattacaag
cagctaccacctacaatcaaatcacaaacggctgcgtcaaaaggtctgtcactgagcctc
atggagagactgatccagatgtatggagactctgttgtccgtatgctaacagttcagtac
cgcatgaacagcgccatcatggagtgggcctccaaagagatgtaccaggggagactgaca
gctcacagctctgtgaagggacacttattaaaagatctacccagagtctcatgtgtggaa
gaaacaagcacaccactgcttcttatcgacacggcaggctgtggtctgaatgagatggag
gtcgctgatgagcaatctaagggcaaccaaggtgaggtggatatcgttgatctgcacatt
aaggccctgactgaagctggtttaaaagctaaagacatcgctgttattgcgccatacaat
ctacaagtggatctgctgcgtcagagattatctgcaagacatccggagctggagataaag
tcagtggatggatttcagggcagagagaaagaagctgtggtgttgtctcttgttcgatcc
aacagaaaaggtgaagttggatttcttgcagaggaccgaaggattaatgttgctgtaaca
cgcgcaagacgtcacattgctgtggtttgtgacacccaaacagtccaaaatcatctcttc
ctaaagtccctaattacccacatgactgagtttggtgaggtcagaacggcattcgagtac
atccaggacatagtgccacagaactacacccgtgaccataaagacacaaagcccaacaca
tcttccagcagctccaacaccaaacagaaagttaaacaaccaccccccagcaaagggaaa
caaggacagatgtcaagtgataaaaatactgctacaaagaagcagacagcatcttttgaa
acggcacagagagaggaagagcagaagaaaaacagacacgctgagatcagagagcaggtg
gagaactttctaaaggatttgaatcaaaatgaactccagtttccatcatcgtttaactct
cacgaccgcctgctggtccatcagattgctgaggagctgggacttgtacatgaaagtaag
ggtgaggggaaagaccggtgcatcactgtctccaggccagtacagtcatcacctgctgag
gagcaaaatcaggaagcagaaaacacccaagaagaagaaacagttcaaaatccccaaaca
gagctgctgtctcaacttccattagacctgaaaagtttacatttagagcggatgaagagg
gagcagcagaaaagagaagaaaatagtcaacaaaaaaagcagcagggcaatatcccagca
gctcaaagccagtcatcaaagaagcaaaagtcagcaaaaggaaagagccgaacaaaggcg
ggcgcatgcgacattgctaccgctgctgctccagacgatgactttgacgcgctgatcaat
gctgtcaagaaggccgacagtgtgtgcagttttgtgaagtgtaaggcgtcggtgctaaca
cttggacagctttgccttttctgcaacaggcagttttgtctgagtcatcatataccagag
gtccatggctgtggagataaagcaaagtctcatgctcggatgagaataagtaaagaaggt
gttctttatgcagggagtggcaagaaagacaaatcaatggaccccaataagaaagcctat
ctgcaaaggaaactggattccaagctgaaagatatggcatcacagaggagaccgaaaacc
aaagaggatagttag
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