Cheilinus undulatus (humphead wrasse): 121514807
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Entry
121514807 CDS
T07473
Symbol
spg11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cud03400
]
121514807 (spg11)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121514807 (spg11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
121514807
NCBI-ProteinID:
XP_041651089
LinkDB
All DBs
Position
9:2208053..2238583
Genome browser
AA seq
2393 aa
AA seq
DB search
MLEPSQQQNYSIQVCVIPENQHCGQVADILRAQSAPGSSLLGCLDRKGRLVVLDPADREA
PPAEVDGCWADFSWEEVTAHSRGVRLLVVGSRFDLKLLEVEAERASSVSLLNVCDCPADR
LLQIIREHDHDVPELQSVQILSFSAGRCCLLLNSDWLLQLQFHQTEERELQTLSCCRIQT
DGDGHAAVHHCVCRETLFILSNTGVISVCNITDGCLLATIDLPAYLSSGAPEDDLTSSSS
FSSSSFCLLQVSADLSTAVAITKTHTAIAVDLNHYFRMHPDRLLCADPPSRLPLRPEHPW
DQDSLASSDYSLSALGSKLKADRSWEARLASMYSRAQQQAAPSPSHSLFQPSGTSWSSSL
PHLEFHPALSSAHSRAPPGGVTANFSICESSMPSLLTVTEFSAQLTFVSPGNKQTTVALW
DLESGRVSYHQAEGEAVPVERCGERQHRLLLMKTGVFLVLFSVSQQDLLSRLMLFGSAST
VDAVCHLNSWGRCSIPIHALQAGLKNRQLDTVDFYLKSKENILNPAADQPAASTMSLKEC
VQELCPALDLLCSAVRESNSDAQSRQFSEQLLNITMSFVNTQIRSILSNTHYEDAGVLSC
VEVLNRYVTELRTYMKRFPWHTGGDTTSTNSADPVKEEAQRDEWEQLQTEELIRESILTN
QIPRAQAVLQRRGCPEQSLPSLRMEGLRQVFSCLQHRDLQTAKTLLTNMGFNVKKQLHSI
SLYTDDKDLREFVVKELSGQNYFPADELQSVEFIREMEKLGSLPAARCPAKTTSKRAVQM
ARREAGRGEEALKELLRQRRSEEEGDSLWRNLRLDWVRNWDQSCQSAVLLSRLSHREVTS
CDPAVLWRYLTALHDQLRVVDWIQNSSASQWPELTPELVNNNTVCSSYMREDILDMLARR
GVFIPDELSDLELLLWRLAQGGGVMSASPPIPQYRSPLGLDLHGLFITFCLDRRLQYLLY
SYLEHYRLTPRNCSLLTNQSLSGSQPWFEMLVKIQEITRDLSDPGLVFQASLTSAQVLLP
GSQPSLSSLLLEGHSLLALAAVMFAPGGIDQVVVQGERSGRSERAVDPQLLKMALAPHPK
LKAALFPSGPRGNMMTSDISVYHLLQALHPLDPSRLFSWQTTNTLNSTETSELPHFSSPH
LVNRFALVENLDFLYYLRHGRPSFAYATFLVQQLSSCSEVKILLQQVRQQVYRLALQCFD
VPSVASACVCFCELLGVCSLALRVDIRVMNTILQHWNQLNTSTATEQRLHSLGVKLAEAE
PEAAEELIGYLENAVTHILEQKGIGRSSYEAAQEWALPVQFCQLHGLRLSSVYPAHCAAD
GQFIHYLLFVQFHSFPPQQVRSLAAQFGPALQAHLGLAFQDLQVFSQRKSGAPEEQQVGP
LSTARPSESSEHPRELFQVLLQSQEEDTPCRYLLQQALVQRCPTLAVLAACQQEAGLLQC
LCVWVLTSVDDVTAEEATSHLGEAPQHHEWTLHDLSIIWRTLLGRGHVRPLLRGFQLFQR
DCPLVLVLKMFELCCDYRNFSEAKAKLLDFQRTLIAMRNGSPAPSGGLPLQWVESQASVL
LLTMLQRCSSQYDLHRLLQLLADVDKLLKSNGPDFRKLSQLSQILQGSEVSVSPHLLQSS
TPSVQQEEFQAAVDALQARGRYNQARQVALLAGLPVHRLLLSQLLQEVSSQQSKRQWRRL
DNRVGFWRKCHDQLKADSTDPESASQFFLSQAESRPSDSSEAPNELLDVQERCLLLCLAS
HWLSQLQPLPVDRLKGLEKKLWVSRIRQHILTITMEKESVFNLPPAITPEMNTYGVLMKE
FSFSNISGLNTDECLSLDGLPGPLEEQNIDPALSGEERKVLVSLIGQLLDEGSIHEACRV
CRYFSLHHPDMWVVLRCRGLASGESNPEAPEEASEALPKKGITSSASINSLSSFVVVPLP
EDEVVVQLQKLVDKCRHGNNYCKQVLSLYQLSKELQCSFSQICAEEPRSVLEKLLLSEQP
ERFRKAQAFIRAQGLSADSVAELVSSAVAQALLTSNQELQLERQVFRPSEGRDSLVQLIK
LCEDPNLVGLKLLENLNTVPLRDLNCIVELLIVAHDCFSLTCNMEGIVRVLQAARHLSHA
HLAPGEHYGLLVRLLTGIGRYNEMTYIFDLLHQNHRFEMLLRKKMDTDRGQSSSLKTALL
DYIKRCLPADSEKHNMVALCFSMRREIGENHEMAARTQLKIIESQPWAVTPDLKSSLVKV
LGLLKDAAESFSKDSCVRQATRCVRTAKLVALQLHFLNNGLDLRVINLRPAEMMNAIIAL
PRCYQVFVVSEAYSYSPDWAELLYQKVILKGDFVYLEELKRHRPLTSGLFEDIFKKLDGA
PSNASANVKRLLTHCDDVYTRYRLAYQQKLFDVTKTLLQDAKTSSYLNDRLAS
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atgttggagccttcgcagcagcagaattactccatccaggtgtgtgtgatcccggagaac
cagcactgtggacaggtagcggacatcctcagagctcagtccgctcctggaagctctctg
ctcggatgtttggaccgcaaaggccgacttgtggtgttggacccggcagacagagaggct
cctccggcggaagtggacggctgttgggcggatttttcctgggaggaggtgactgctcac
agtcgtggtgtcagactgctggttgtcgggtctcgttttgatctgaagctgctggaggtc
gaagcagagcgagcatcttctgtttccctgctgaatgtctgtgattgtcctgcagaccgc
ttgctgcagatcatcagagagcacgaccacgatgttcctgagctgcagtcggtgcagatt
ttgtcattctctgcgggtcgctgttgtctcctgctgaactctgattggctgctgcagctg
cagtttcatcagacggaggagcgggagctgcagacattatcctgctgcagaatccagaca
gacggagacggacacgcagctgtgcatcactgcgtctgcagagaaacgctgttcatcctc
agcaacactggagtcatatctgtgtgtaacatcaccgatggttgcctcctcgccaccatc
gacctccctgcttacctgagctctggtgctccagaggatgacctcacttcctcttcctcc
ttctcctcttcctccttctgcctccttcaggtgtcagctgatctcagcacagctgtggcc
atcaccaagactcacaccgccatcgccgttgatctaaaccactactttaggatgcatccg
gaccgcctgctgtgtgctgaccctccgtcccgccttcctcttcgacctgagcacccctgg
gaccaggacagcctggcgagctccgactacagcctctctgccctggggtcgaagctaaaa
gctgaccgctcctgggaggctcgtctggcctctatgtacagcagagcccagcagcaagca
gctccttccccctcccactccctcttccagccaagtgggacctcctggtcctcctccctc
ccccacctggagttccacccggctctatcctcggcccatagcagagcgcctcccggtggt
gtgacggctaatttctccatctgcgagtcgtccatgccatctctgctgactgtaaccgag
ttttcagcccagctcaccttcgtctcacctggaaacaaacagaccacagtggcattgtgg
gatttggagtctgggagagtcagctaccaccaggcggagggtgaggcggtccctgtggag
cgctgtggagagagacagcacagactgctgctgatgaagactggtgttttcctggtctta
ttttccgtctcccagcaggatttactcagcaggttgatgttatttggcagtgcttcaacc
gttgatgcagtgtgccacctgaacagctgggggcgctgctccatccccatccatgcctta
caggctggactgaagaaccgtcagctggacacggtggatttctacctgaagagtaaagaa
aacatcctgaaccctgcagccgatcagccggcagcctccacaatgagcctgaaagagtgc
gtacaggagctctgtcctgcgttggacctcttgtgttcggctgtcagagagtcaaacagc
gacgctcagagccgacagttctctgaacagctgctcaacatcaccatgagctttgtcaac
acacagatccgctccatcctctccaacacacactatgaggacgcaggcgtgctgagctgt
gtggaggttttaaatcgatacgtcacagaactgaggacctacatgaagagattcccctgg
catacagggggcgacaccaccagcacaaactctgctgaccctgttaaagaggaggctcag
agagacgagtgggagcagctgcagacagaggagctgatccgcgagtccatcctgaccaat
cagatcccgagagctcaggccgtcctgcagaggcggggctgtccagagcagagtctgcca
tctcttaggatggagggtctacgtcaggtcttctcctgcctgcagcaccgagacctgcag
acggccaaaaccctgctcactaatatgggttttaatgtgaagaagcagcttcacagcatc
agcctgtacaccgacgacaaagacctcagagagtttgtggtgaaggagctgtcagggcag
aattatttcccagcagatgagctgcagagtgtggagttcatcagagagatggagaagctg
ggatcgctgcctgcagcccgctgtcctgcaaaaaccacatccaaaagagcggttcagatg
gcgcgtagagaggcgggtagaggagaggaggctctgaaggagctgctgaggcagaggagg
tctgaggaggagggggacagtctctggaggaaccttcgtctggactgggtcagaaactgg
gaccagagctgtcagtcggccgtcctcctctccagactcagccacagagaggtgacttcc
tgtgatccggccgtgttgtggcgttacctgactgccctccacgaccagctccgtgtggtc
gactggatccagaacagcagcgcctcccagtggccggagttaaccccagagctggtgaat
aataacacggtctgcagctcgtacatgagggaggacatcctcgacatgctggccaggaga
ggtgtgttcatcccagatgagctgtctgacctggagctgctgctgtggcggctcgctcag
ggtgggggtgtgatgtctgcctcccctcccatcccccagtaccgctcccccctcggcctc
gacctacacggcctcttcatcaccttctgtttggaccgcaggctgcagtacctgctctac
tcctacctggagcactacagattaacacccagaaactgttccttattgaccaatcagagc
ctctctggcagtcagccatggttcgagatgttggtgaagatccaggagatcaccagagat
ctgtcagatccaggtctggtgtttcaggcgtctctaaccagtgctcaggttctgttaccg
ggtagtcagccgtctctgagcagtctgcttttagagggtcacagtctccttgctctggcc
gccgtcatgtttgctcctggaggaatcgaccaggtggtggtccagggtgaaaggtcaggt
agatctgagcgggctgtggaccctcagctcctgaagatggcactggctcctcaccccaaa
ctcaaggcagcccttttcccctccgggccccgtggaaacatgatgacctctgacatctcg
gtctaccacctgctgcaggctctccatcctctggacccatccagactgttcagctggcag
actacaaacaccctcaactctacagagacgtctgagctgcctcacttctccagccctcac
ctggtcaacaggtttgctctggtggagaatctggacttcctttattacctccgccatggc
cgaccctcttttgcatacgccaccttcctggtgcagcagttgagcagctgcagtgaagtc
aagatactgctgcagcaggtccgtcagcaggtctaccgcctggccctgcagtgcttcgat
gtaccgtctgtggcgtcggcgtgcgtttgtttctgtgagctgctgggagtctgcagcctg
gcgctgagggtcgacatccgagttatgaacaccatcctgcagcactggaaccaactcaac
acgtccacggccaccgaacaacgcctacactctctgggtgtcaagttggcagaggcggag
cctgaagcagcagaggagctgattggctacctggagaatgctgtgacgcatattctggag
cagaaaggcatcggcaggtcgtcctatgaggcggctcaggagtgggcgttacccgttcag
ttctgtcagctccatggtctgaggctcagctcggtttaccccgcccactgcgccgctgat
ggacagttcatccactacctgttattcgttcagtttcacagcttccctcctcagcaggtg
aggtcactggcggctcagttcggccccgccctgcaggctcacctgggtctggccttccag
gacctccaggtgttcagtcagaggaagagcggggcccctgaggagcagcaggtgggccct
ctgagcacagcgaggccctctgagagctcggagcaccccagagagctgttccaggtcctc
ctgcagagccaggaggaggacacgccctgcaggtacctgctgcagcaggcgctggtccaa
cgctgcccgacgctcgctgtactggctgcatgccaacaggaggcggggctgctgcagtgc
ctgtgtgtgtgggtgttgacctcagttgatgatgtcacagctgaggaagccacctcccac
ttgggtgaagccccccagcatcatgagtggactcttcatgacctgtcaatcatctggagg
acgctgctggggcggggccacgtcaggcccctcctacgaggcttccagctcttccagagg
gactgtcctctggtgttggtgctgaagatgtttgagttgtgctgtgactacagaaacttc
tcagaggctaaagccaagctgctggacttccagaggacactcatcgctatgagaaatggc
agcccagccccctctggtggactccctttgcagtgggtggagagccaggcctccgtgctg
cttctcaccatgctgcagcgctgctcctcgcagtacgacctccaccgcctgctgcagctc
cttgctgatgtcgacaagctccttaaatctaacggtccagacttcaggaagctgagtcag
ctgagtcagatccttcaggggtcagaggtcagcgtgtctccacatctcctgcagagcagc
actccctccgtccagcaggaggagttccaggctgcagtggatgctctgcaggccaggggg
cgctacaaccaggcccgacaggtcgccctgctggctggtctgccggtccaccgcctgctg
ctcagccagctcctccaggaggtcagctcccagcagtctaagcgtcagtggagacgtttg
gacaatcgagtcggtttctggaggaaatgccacgaccagctgaaggccgacagcactgat
cctgaatcagcctctcagttcttcctgtctcaggctgaatctcgtccttcggactcgtcg
gaggctccaaacgagctgctggatgtccaggagcgctgcctgctgctctgccttgcctct
cactggctctcccagctccagcccctccctgtagacagactgaagggtctggagaagaag
ctgtgggtgagccggatcagacaacacattctcaccatcaccatggagaaggagagcgtc
ttcaacctgccgcctgccatcacacctgaaatgaacacgtacggcgtgctcatgaaggag
ttctccttctctaacatctctggtctgaacacggacgagtgtctgagtttggacggactc
cctggacccctggaggagcaaaacatcgaccctgctctgagtggagaggagaggaaggtc
ctggtttctctgattggtcagttattagatgaagggagtatccatgaagcctgccgggtg
tgccgctacttctctctacatcacccagacatgtgggtggtgctgcgctgccgaggtcta
gcctctggagaatccaaccctgaggctccagaggaggcatcagaggctctgccaaagaag
ggcatcaccagctccgcctccatcaacagtttgtcgtctttcgtggtcgtccctctccct
gaagacgaggtcgtggtccagctccagaaacttgtggataaatgtcgacatggaaataac
tactgcaaacaagtcctgagtctctaccagctctcaaaggagctgcagtgctccttcagt
cagatctgtgcagaagaacctcgctcagtgctggagaagctgcttctgtcggagcagcca
gagcgttttcggaaagctcaggccttcatcagagctcagggtctgtctgcagactctgtg
gccgagctggtttcctccgccgtggctcaggcgctgctcacctccaaccaggagctgcag
ctggagaggcaggtgttcaggccgtcagaggggagggactccctggtccagctcatcaaa
ctctgtgaagacccgaacctggtgggactcaagctgctggagaacctgaacactgttcct
ctgagggacctcaactgcattgtggagctgctgatcgttgctcacgactgtttcagtctc
acctgtaacatggaaggtatcgtcagagtcctgcaagccgcccgtcaccttagccatgcc
cacctcgcacctggagagcactacggtctgctggtgcgtctgctgacaggtatcggcagg
tataatgagatgacgtacatcttcgacctactgcaccagaaccatcgctttgagatgctg
ctgaggaagaagatggacacagacagaggacagagctccagtctgaagacggctctgctg
gattacatcaagcgctgcctccctgcagacagcgagaagcacaacatggtggcgctgtgc
ttcagcatgaggagggagattggagaaaaccacgagatggctgcgaggacgcagctcaag
atcatcgagtctcagccgtgggcggtgacccctgatctgaagagttcactggtcaaagtg
ttaggtctgctgaaggacgctgcagagagcttctcaaaggactcgtgtgtgcgtcaggcc
actcgatgcgttcgcacagctaagcttgtcgctctccagcttcacttcctgaataacgga
ttggacctgcgtgtcatcaacctgcgacctgcagagatgatgaatgccatcatagctctg
cctcgatgctaccaggtattcgtggtgtcggaggcgtacagctacagtccagactgggcg
gagcttctgtaccagaaggtgatcctaaagggcgactttgtttacctggaggagctcaaa
cgtcaccgacctctgacgtccggcctgtttgaggacattttcaaaaagctggacggcgct
ccgagtaacgccagtgccaacgtgaagcgtctgctgactcactgtgacgacgtgtacacc
cgatacagactggcctatcagcagaaactgttcgatgtcaccaaaacgctgctgcaggac
gccaagacgtccagctacctgaacgacaggctggccagctga
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integrated database retrieval system