Cheilinus undulatus (humphead wrasse): 121515156
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Entry
121515156 CDS
T07473
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cud03000
]
121515156 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cud03310
]
121515156 (roraa)
Transcription factors [BR:
cud03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
121515156 (roraa)
Nuclear receptors [BR:
cud03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
121515156 (roraa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
121515156
NCBI-ProteinID:
XP_041651716
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Position
9:complement(28954503..29233986)
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AA seq
519 aa
AA seq
DB search
MDSPPDPASDPGNSASEPATPVRETPVNLETLRKADHPAPVRRQTCSSTNRGISVTKKTH
TSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAAYSCPRQKNCLIDRTSRNR
CQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLTP
SYGLSANGLTELHDDLSGYMDGHTPDGSKPDSAVSSFYLDIQPSPDQSGLDINGIKPEPI
CDFAPGSGFFPYCSFTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQAFL
QEEVESYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVV
FVRMCRAFDSQNNTVYFDGKYAGPDVFKSLGCDDLISSVFEFGKNLCSMHLSEDEIALFS
AFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQKNHREDGILTKLICKVSTLRALCSRH
TEKLTAFKAIYPDIVRAHFPPLYKELFGSDFEQSMPVDG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggactcccctccagatccagcgagcgacccgggcaacagcgcctcggagccggctacc
ccggtcagggaaaccccggtaaacctggagactctccggaaagcggaccatccagccccg
gttcgaaggcagacctgttcgagcaccaacagaggtatctcagttacaaagaagacacat
acctctcaaatcgaaataattccctgcaagatctgtggagacaaatcatcaggcatccat
tacggggtgataacatgtgaaggctgtaagggctttttcaggaggagtcagcagagcaat
gcagcctactcctgcccccgtcagaagaactgcctgatcgaccgcaccagccgcaaccgc
tgccagcactgccggctgcagaagtgcctggcagtgggcatgtccagagatgcggtgaag
tttggccgtatgtcaaagaagcagcgagacagcctgtacgctgaggtccagaagcatcgg
ctgcagcagcagcagcgcgaccaccaacaacagcccggagaggcagagccgctcacaccc
agctacggcctctcagccaacggtctcacagagctccatgatgacctcagcggctacatg
gacggtcacacccctgatggcagcaaaccagactcggcggtcagcagcttctatctagac
atccagccatctcctgaccagtcaggcctggacatcaacggcatcaagccggagcccatc
tgcgactttgcccccggctctggcttcttcccttactgctccttcaccaatggagaaacg
tcccccaccgtgtccatggctgaactagagcacctggctcagaacatctctaaatcacac
atggagacatgtcagtacctaagggaggagctgcagcagatgacctggcaggccttcctg
caggaggaggtggaaagctaccagaacaagccccgggaagtcatgtggcagctgtgtgct
atcaaaataacagaggccattcagtatgtggtggagttcgccaagcgcatcgacggcttc
atggagctgtgtcagaatgatcagatagtgctgctgaaagcaggctctttggaagttgtg
tttgtcagaatgtgccgtgcctttgactcgcaaaacaacacagtctattttgatggaaag
tatgccggacctgatgtgttcaagtcattaggctgtgacgacttgatcagctccgtcttc
gagtttgggaaaaacttgtgttctatgcacctgtctgaggatgagatcgccctgttctcc
gcctttgtgttgatgtctgctgaccggtcttggcttcaggagaaagtgaaggtggagaaa
ctccagcagaaaatccagctggcgctccagcatgtcctgcagaagaaccacagagaggat
ggtatacttacaaagttgatatgcaaagtgtcgacactgcgagcgctgtgcagtaggcat
acagagaagctaacagctttcaaagcaatatacccagacattgtgcgtgcccacttcccc
cccttatacaaggagctgttcggatcagactttgagcagtccatgcccgttgacgggtag
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