Cheilinus undulatus (humphead wrasse): 121515213
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Entry
121515213 CDS
T07473
Symbol
col4a4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud04382
Cornified envelope formation
cud04510
Focal adhesion
cud04512
ECM-receptor interaction
cud04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121515213 (col4a4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
121515213 (col4a4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121515213 (col4a4)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
121515213 (col4a4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cud04147
]
121515213 (col4a4)
00536 Glycosaminoglycan binding proteins [BR:
cud00536
]
121515213 (col4a4)
Exosome [BR:
cud04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
121515213 (col4a4)
Glycosaminoglycan binding proteins [BR:
cud00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121515213 (col4a4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
121515213
NCBI-ProteinID:
XP_041651800
LinkDB
All DBs
Position
2:51980675..52075489
Genome browser
AA seq
1667 aa
AA seq
DB search
MLLTSCSAPCSYTLLWSLLMILTAPLAAQGGDQTEPCAGLDCSSCQCLPAKGSRGSPGLL
GQQGPQGPMGFPGPQGPPGEKGHRGDEGPRGSAGPKGDLGSVGVPGFPGADGLPGHPGAA
GGPGFPGLDGCNGTRGERGQPGLPGEPGPQGVPGFTGLKGFPGDVAVYYIEYPGVPGDVG
PAGLPGLQGDAGLRGQQGPSGLTGLDGTNGVPGLPGFRGPPGEKGRSLPGQKGDEGDQGP
QGPPGPFEYVERPEDYYIKGQKGAQGPKGVCGRPGLPGLDSLPGIKGEKGIVGFPGPRGL
YGIPGAIGTRGIKGIKGSPGLPGLIGQEGQKGRMGNPGPKGLPTEVNILNKGEDGDPGVV
GPRGPPGDMGFMGMHGPQGAPGRSMSGPEGPPGPGGAPGSKGDRGNPGEVFIDVSKPGEP
GKPGRPGPQGLKGEPGIPGTYCVPGVPGEPGRTGNPGPPGAQGFAGFKGKQGDCSCGPDM
IIRGPPGPAGERGLPGSTGSPGSIGFRGEKGLPGDMGEGGKQGLGGFPGVKGFKGQRGDF
TEVDMPGEKGNRGPLGPPGRQGSPGRRGLDGLPGAPGNPGSPGQSFSSFPGDRGYPGYPG
PKGLPGPSGSVGSSVVGAIGQRGAPGNMGPPGPPGFPGLKGVKGDTLPCVPKIPGPPGER
GEKGNRGFPGPAGPPGFPGLTGPDGTKGDTGQSGLIGPPGRQGPPGFVGDTGDEGPEGFS
YSGDPGSPGLSGSLGLRGLAGDSSVGPSGPIGFPGPRGSPGPKGVPGPPGADGVQGAIGL
SGGPGAKGQRGQDGPPGFPGFPGRPADGCDSGKPGFTGPPGPQGNIGPPGFLGEKGDTGD
DGLPGVGPKGAVGKPGSPGFPGYPGPQGPPGPNGDPGLPGLAGQKGLFGPQGPEGLPGSP
GQPGVPGAKGRKGDRGPDGQDGTPGCEGQKGEKGCKGVSGPPGDTNYVPIPGPPGPPGPP
GIKGFPGPRGNKGAQGTTGRPGYPGINGPPGITGLSGPPGPYGIPGPPGQPGPPGSPGLI
GFPGETGDSGDSGCPGKPGEPGSQGCTGPKGDDGDSIGVPGPPGDKGPPGDFGRSGAPGP
RGDTGGPGFIGSPGQRGCKGDQGGQGARGQQGVVGPPGSRGRPGLPGLPGKAGVDGPPGP
LGSQGLPGPPGPLGLHGLDGLKGVKGDMGTRGLSVQGSPGAKGLPGDKGPTGPPGPPGTS
SPGPQGPKGLPGPKGPPGLLGFAGTPGADCKVPVPGPRGDPGFSGQDGEPGPLGDMGAPG
QNSPVPGDDGDNGDNGCTGPQGPPGSIGPTGLPGSPGVPGLKGQRGSPGLMGLLGNRGSK
GYPGSNGPPGPKGFPGPVGPKGEKGRVSSCPPYPPAPPGPPGPTGPPGPPGDPGIEGEIG
LPGPKGKKGDFGSEGPVGEVGPPGLGGNQGGPGLPGESGLTGDKGDRGPVGDQGPRGPYK
KLNSGFLLVMHSQSTTIPVCPYNMRVLWVGYSLLYLEGQEKAHTQDLGQAGSCMKVFSTM
PFSSCNMGTCSYASRNDKSYWLSTTAAVSSIPVVGASIEDHISRCVVCEAPSSAVALHSQ
TSSQPNCPPNWRSLWTGYSFVMHTGAGDEGGGQSLTSSGSCLTDFRAQPFVECQGPRGTC
HYFANIYSFWLTRVDSSSATSNSSSTTLTQGWQQRENIGRCNVCMRE
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atgctgcttacttcctgctccgccccctgcagctacaccttgctctggtccctcctgatg
atcctcacagctcctctagctgctcaagggggcgaccagacggaaccttgtgcaggtctg
gactgctccagctgtcagtgtttaccggccaaaggatcaaggggttctccaggtcttcta
gggcagcagggtccacaagggcctatgggctttccaggacctcaggggcctccaggagag
aaaggccacaggggggatgagggaccaagaggatctgcaggaccgaagggagacttgggg
agtgtcggcgttcctgggtttcctggtgcagacggactcccgggtcatcctggtgctgct
ggaggtcctggttttccaggtctggatggatgtaatggaaccagaggagagagaggacag
cctggacttcctggagagccagggccccagggagtaccgggtttcacaggattgaaggga
tttccaggagatgtagcagtatactacatagagtaccctggagtacctggagacgttggc
cctgctggattacctggtctgcagggcgatgcaggcctccgtggtcagcaaggaccttca
ggcctgacaggactggacggaacaaacggtgtacctggtctgcctggtttcaggggtcca
ccgggagaaaaaggacgatcgctgccaggacagaaaggagatgagggcgaccagggccct
caggggcctcccgggcccttcgagtatgttgagcgtcctgaggactattacatcaaagga
cagaagggagctcaaggccctaaaggagtctgtggaagacctggactgccgggcttggac
tctctcccaggaatcaaaggggagaaggggatcgtgggatttcctggaccccggggactg
tatggtatacctggagcaatcggaaccagaggaatcaaggggattaaaggcagtccaggt
ctgccaggtctgatcggccaagagggacaaaagggcaggatgggaaatccaggtcctaaa
ggcctccctacggaagtcaacatcctgaacaaaggtgaggatggagaccctggagttgta
ggaccgaggggccctccaggagacatggggtttatgggcatgcacgggccccaaggagca
cctggcaggtccatgtctggaccagaaggtcctccaggtccaggtggtgccccaggatcc
aaaggggacagaggaaatcctggtgaggtgtttatagatgtatccaaacctggagaacct
ggaaaaccaggacgccccgggccccaaggattgaaaggagaaccgggtatcccaggtact
tactgtgttccgggggtccctggagagcctgggcggactggaaacccagggcctcctgga
gctcaaggctttgcaggtttcaagggtaagcaaggcgattgctcctgcggccctgacatg
atcatcaggggtcccccaggtcctgcaggtgaaagagggttaccgggttccacaggttcc
cctgggtcgattgggtttagaggggagaaaggtttacctggagacatgggagagggcggc
aaacagggtctaggtggatttccaggtgtaaaagggttcaaaggacagaggggcgatttc
acagaagtggacatgccaggtgagaaaggaaacaggggtcccctaggccctccaggaaga
caaggatcccctggaagaagaggacttgatgggctccccggggcccctggaaaccctggc
tctccaggtcaaagtttctccagcttccctggagacagaggctacccaggatacccaggg
cccaaggggttaccaggaccctcaggctctgtggggtcaagtgttgttggggcaatagga
cagcgaggggcccctggaaacatgggaccccctggacctcctggttttccaggactaaaa
ggagtgaaaggtgacactctgccctgtgtgccaaaaattccaggacctccaggagaaagg
ggagagaagggaaatagaggtttcccaggaccagcagggcctccaggtttcccaggcctc
actggacctgatggaaccaaaggagacaccggacagtctggacttattggaccacctgga
cgacaaggacctccaggttttgtcggagatactggagatgaaggacctgaaggtttcagt
tatagtggagatccaggctctcctggactctctggctcccttggactccgtggccttgca
ggagactccagtgtggggccatcaggacctatcggctttccaggcccacggggatcccct
gggcctaaaggtgtaccaggtcctccaggggctgatggagtacaaggagccattggactg
tctggaggccctggagcaaaaggccaaagaggacaggatgggcccccaggtttccctggt
ttcccaggacgtcctgctgatggctgtgattcaggaaaacctgggttcactggtcctcct
ggcccccagggaaacattggaccaccagggtttttgggggagaaaggtgacactggagat
gatggtcttccaggtgttggtcccaaaggcgctgtggggaaaccaggctctccaggtttt
cctggatatccagggccccaggggccgccaggacccaatggggatccaggcctgccaggt
ctggcgggtcagaaaggtctgtttgggcctcagggcccagagggactgccagggtcccca
ggacagcctggggtccctggagccaaggggaggaagggggatagagggcctgatggtcaa
gatgggactccaggatgcgaaggccagaaaggagagaaaggttgtaaaggagtctcaggg
cctccaggagacaccaactatgtccccattccaggaccaccaggaccaccagggccacca
ggcatcaaaggcttccctggacctcgaggaaataaaggtgcacaaggaaccactgggagg
cctgggtatcctggtatcaatggaccacctggtatcaccggtctttcaggcccccctgga
ccctacggcattccaggacctccaggacaacctggacctccaggaagtccaggtctcatc
ggctttccaggagagaccggagattcaggtgactcaggatgcccagggaaacctggagag
ccaggtagccaaggatgtactggacccaaaggtgatgatggagactctatcggagttcct
ggtccacctggagacaaggggcctcctggagactttggccgttcaggagctcctggacct
cgaggagatactggaggtccaggtttcattgggagtccaggacagagaggatgcaaaggt
gatcaaggcggtcagggtgcccgtggacaacaaggtgtggtcggtccaccaggttccaga
ggtcgcccaggtcttccaggtcttcctggtaaagcaggcgttgatggtcctccaggtcca
ttgggcagccagggactcccaggtcctccaggtccgctgggtcttcatggactggacgga
ctgaaaggtgttaagggggacatggggacaagagggctgagtgttcaaggttctccaggt
gccaaaggtcttccaggggataaaggacctacaggtcctccaggtcctccaggcacatct
agccccggcccacagggacccaaaggcctcccaggacccaaaggacctccaggtctgtta
ggatttgcaggcactccaggagcggattgtaaagttccagtccccgggccccggggagat
cctggattctctggacaagatggtgaaccaggtccacttggggacatgggggctccaggt
cagaactctccggttcctggagatgatggggacaatggggacaatggatgcacagggcct
cagggtcctccaggatctataggtcctactggattgccaggcagccctggagttcctgga
cttaaaggtcaacggggatctccaggtctgatgggactgcttggtaatcggggttccaaa
ggttatcctggttccaatggacccccaggaccaaagggatttccaggaccggttggtcca
aaaggtgaaaaaggacgagtctccagctgtcccccttaccccccagctccgccaggaccc
ccaggacccactggtccccctggtccacctggagatcctggcattgagggagaaattgga
ttgccgggacccaaaggtaaaaaaggggactttgggtctgagggaccagtaggcgaagtg
ggcccccctggtttaggaggaaatcaaggagggccgggcctgccaggggagagtggactt
acaggagacaaaggtgaccgtggtccagtcggtgatcagggtccacgtggtccatataag
aagctaaactctggcttcctgttggtgatgcacagccaatcaacgactatcccagtctgc
ccttacaacatgagggtgctttgggtgggctacagtctgctgtacctggagggtcaggag
aaggctcacactcaggacctgggtcaggcaggctcctgtatgaaggtgttctccaccatg
ccattctcttcctgtaacatgggaacctgctcctacgccagccgtaatgataagtcctat
tggctgtctaccacggcggctgtgtccagtataccggtggtcggagcctccatagaggat
catatcagccgctgtgtagtttgtgaagccccctcctcagctgttgcattgcacagccag
acctcaagccaaccgaactgccccccaaactggaggagcctttggactggatactctttt
gtcatgcatacaggggcaggcgacgagggcggcggccagtctctgacatcatcaggtagc
tgtctgacagacttcagggcccagccctttgtggagtgtcaggggcctcgcggaacctgc
cactacttcgccaacatctacagcttctggctgacccgagtggactcatccagcgccacc
tccaacagctcctccaccacgctgacccagggctggcagcagagggagaacatcgggagg
tgcaacgtctgcatgagggagtga
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integrated database retrieval system
