Cheilinus undulatus (humphead wrasse): 121515258
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Entry
121515258 CDS
T07473
Symbol
hmgb1b
Name
(RefSeq) high mobility group protein B1b
KO
K10802
high mobility group protein B1
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03410
Base excision repair
cud04140
Autophagy - animal
cud04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
121515258 (hmgb1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121515258 (hmgb1b)
09143 Cell growth and death
04217 Necroptosis
121515258 (hmgb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cud03036
]
121515258 (hmgb1b)
03400 DNA repair and recombination proteins [BR:
cud03400
]
121515258 (hmgb1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cud04147
]
121515258 (hmgb1b)
Chromosome and associated proteins [BR:
cud03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
121515258 (hmgb1b)
DNA repair and recombination proteins [BR:
cud03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
121515258 (hmgb1b)
MMR (mismatch excision repair)
Other MMR factors
121515258 (hmgb1b)
Exosome [BR:
cud04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121515258 (hmgb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
HMG_box_5
Ribosomal_60s
Ets
Motif
Other DBs
NCBI-GeneID:
121515258
NCBI-ProteinID:
XP_041651870
LinkDB
All DBs
Position
2:complement(40530847..40533471)
Genome browser
AA seq
200 aa
AA seq
DB search
MVKDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKVRYEREMKNYIPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKVKGENPGLS
IGDTAKKLGQMWNDSSSEERQPYEKKASKLKEKYDKDIVAYRTKGKVDSAPAAAAEDDDE
DEEEEEGEEEEEEDDEEDDE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagatccaaataagccgcggggcaagatgtcctcatatgcctactttgtgcag
acatgcagagaggagcataagaagaagcatccggatgcctctgtcaacttttcagagttc
tccaagaaatgctcagagagatggaagaccatgtcaccgaaagagaagggcaagtttgaa
gacatggccaaacaagataaggttcgttatgagagggaaatgaagaattacattcccccc
aagggccagaagaagaagcgattcaaggaccccaacgcccccaagagaccaccgtctgca
ttcttccttttctgtgccgactttcgccccaaagtaaaaggtgagaaccctgggctctcc
attggagacacagcaaagaagttgggacagatgtggaatgactcatcctcagaggaaagg
cagccttatgagaagaaggcatccaagttgaaggagaagtacgacaaggatattgttgct
taccgcacaaagggcaaagtggattctgcaccagctgctgcagcagaagatgacgatgag
gacgaagaagaggaggagggagaggaggaggaggaagaagacgacgaagaggatgatgag
tag
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integrated database retrieval system