KEGG   Cheilinus undulatus (humphead wrasse): 121515258
Entry
121515258         CDS       T07473                                 
Symbol
hmgb1b
Name
(RefSeq) high mobility group protein B1b
  KO
K10802  high mobility group protein B1
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03410  Base excision repair
cud04140  Autophagy - animal
cud04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    121515258 (hmgb1b)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    121515258 (hmgb1b)
  09143 Cell growth and death
   04217 Necroptosis
    121515258 (hmgb1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cud03036]
    121515258 (hmgb1b)
   03400 DNA repair and recombination proteins [BR:cud03400]
    121515258 (hmgb1b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cud04147]
    121515258 (hmgb1b)
Chromosome and associated proteins [BR:cud03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    121515258 (hmgb1b)
DNA repair and recombination proteins [BR:cud03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     121515258 (hmgb1b)
   MMR (mismatch excision repair)
    Other MMR factors
     121515258 (hmgb1b)
Exosome [BR:cud04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   121515258 (hmgb1b)
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5 Ribosomal_60s Ets
Other DBs
NCBI-GeneID: 121515258
NCBI-ProteinID: XP_041651870
LinkDB
Position
2:complement(40530847..40533471)
AA seq 200 aa
MVKDPNKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKVRYEREMKNYIPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKVKGENPGLS
IGDTAKKLGQMWNDSSSEERQPYEKKASKLKEKYDKDIVAYRTKGKVDSAPAAAAEDDDE
DEEEEEGEEEEEEDDEEDDE
NT seq 603 nt   +upstreamnt  +downstreamnt
atggtgaaagatccaaataagccgcggggcaagatgtcctcatatgcctactttgtgcag
acatgcagagaggagcataagaagaagcatccggatgcctctgtcaacttttcagagttc
tccaagaaatgctcagagagatggaagaccatgtcaccgaaagagaagggcaagtttgaa
gacatggccaaacaagataaggttcgttatgagagggaaatgaagaattacattcccccc
aagggccagaagaagaagcgattcaaggaccccaacgcccccaagagaccaccgtctgca
ttcttccttttctgtgccgactttcgccccaaagtaaaaggtgagaaccctgggctctcc
attggagacacagcaaagaagttgggacagatgtggaatgactcatcctcagaggaaagg
cagccttatgagaagaaggcatccaagttgaaggagaagtacgacaaggatattgttgct
taccgcacaaagggcaaagtggattctgcaccagctgctgcagcagaagatgacgatgag
gacgaagaagaggaggagggagaggaggaggaggaagaagacgacgaagaggatgatgag
tag

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