Cheilinus undulatus (humphead wrasse): 121515934
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Entry
121515934 CDS
T07473
Symbol
upf3b
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
cud
Cheilinus undulatus (humphead wrasse)
Pathway
cud03013
Nucleocytoplasmic transport
cud03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cud00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121515934 (upf3b)
03015 mRNA surveillance pathway
121515934 (upf3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cud03019
]
121515934 (upf3b)
Messenger RNA biogenesis [BR:
cud03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
121515934 (upf3b)
mRNA cycle factors
P-body specific factors
121515934 (upf3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
121515934
NCBI-ProteinID:
XP_041652829
LinkDB
All DBs
Position
10:complement(6416532..6421510)
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AA seq
464 aa
AA seq
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MKEDKENTRPKEKRVEIKCEDGEKMEKPKEKKEAMTKIVIRRLPPSLTKEELEEQLQPLP
DVDYLEFFSNDTSLYPHLFSRAYINFKNQEDIVLFRDRFDGYVFIDNRGQEYPAIVEFAP
FQKTAKKKSKKKDAKCGTITEDPDYRKFLEYYNGDDEKLASTPETLLEELEARSKELVGT
KKTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEERRKRKEAEKMKRLE
KPLEKDKDQVKEEPKIKLLKKPDRGDDDNTEKPKEKTKKPEKPNKEDKFAGSSDHKRRQH
TENKEDRGGRKADEDGRKEFRERAADRDRDREREREKERRQKEKERLRRQDEDRRRRRER
QDGENTCKKREDEVRKEKERVLEKKKAENNADSVHVERPERPAKDNKKEESGKRERLRNK
DRPAIQLYQPGARSRNRTAGGGDSNSADRKPDTESEKVADKGED
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagacaaggaaaacacccgaccgaaggaaaaaagggtagaaataaagtgtgaa
gatggagaaaagatggagaagccaaaggagaagaaagaggctatgacaaagattgtgatc
agacggctgccaccaagtctcaccaaggaggagctggaggagcagttacagcctctccca
gatgtcgattacctggagtttttctccaacgacaccagcctttacccccacctcttctca
agggcttacattaatttcaaaaatcaagaggatatagttctcttcagagacagatttgat
ggatatgtgttcattgacaacagaggtcaggagtatcctgccattgtagagtttgcacct
tttcaaaagaccgccaagaaaaagagcaagaaaaaggatgctaaatgtggaacaataact
gaagatcctgattacaggaagttcctggaatattacaacggagatgacgagaagttggca
tcaacacctgagaccttgttggaagaactggaggcgagatccaaggagcttgttggtacc
aaaaaaacaacccctctgctggacttcctgaagaataaacagagaatcagggaggaaaag
aaagaagagaggaggaggagggaacttgagcgcaagcgtctgcgtgatgaagagcgtcgt
aagtggagggaggaagagagaagaaagcgcaaagaggcagagaagatgaagagacttgag
aaaccgctggagaaagacaaggaccaagttaaagaagaaccaaaaataaagctcctgaag
aaaccagacagaggagatgatgataataccgagaagccgaaggaaaagaccaagaaacca
gagaagccaaacaaagaggacaaatttgcagggagtagtgatcacaagaggcgtcaacac
actgaaaacaaggaggatcgaggaggaagaaaagctgatgaagatggccggaaggagttc
agagagcgtgcagcagatcgagacagagaccgcgaacgggagcgggaaaaggaacggcgg
cagaaagagaaagagcgtctcaggcgccaagatgaggatcgccgaaggagaagagagcgg
caggacggagagaacacgtgcaagaagagggaggatgaagtcaggaaagaaaaagagcgt
gtgttggagaagaagaaagctgaaaataatgctgactctgtgcacgttgagaggccggag
aggcctgcaaaagacaacaagaaggaggagagcgggaaaagagagaggctacgaaacaag
gaccgacccgccattcagctgtaccagccaggggccagaagccgcaatcgaactgctgga
ggaggagactcaaactcagccgacagaaaaccagatactgagtcagagaaagtggccgac
aaaggagaagattga
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