KEGG   Cheilinus undulatus (humphead wrasse): 121516002
Entry
121516002         CDS       T07473                                 
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3 isoform X1
  KO
K12880  THO complex subunit 3
Organism
cud  Cheilinus undulatus (humphead wrasse)
Pathway
cud03013  Nucleocytoplasmic transport
cud03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cud00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121516002 (thoc3)
  09122 Translation
   03013 Nucleocytoplasmic transport
    121516002 (thoc3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cud03019]
    121516002 (thoc3)
   03041 Spliceosome [BR:cud03041]
    121516002 (thoc3)
Messenger RNA biogenesis [BR:cud03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     121516002 (thoc3)
Spliceosome [BR:cud03041]
 Complex C
  Other components
   EJC/TREX
    121516002 (thoc3)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    121516002 (thoc3)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 EIF3I WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_Vps41 DSE1_N WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_NOL10_N RMC1_N WD40_RFWD3 Beta-prop_TEP1_C eIF2A Beta-prop_HPS5 WD40_MABP1-WDR62_1st Tricorn_2nd NBCH_WD40 WDR90_beta-prop_4th TRM82_WD Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_ACSF4 B-prop_COPA_B_2nd Beta-prop_EIPR1 PD40 ASA1 Peptidase_S9_N PAC11 Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_NWD2_C WD_LRWD1 Beta-prop_SCAP Beta-prop_DCAF4 PROPPIN
Other DBs
NCBI-GeneID: 121516002
NCBI-ProteinID: XP_041652957
LinkDB
AA seq 332 aa
MASQYYQEMQESFKNNNKSREFPAHTAKVHSVAWSCDGRRLASGSFDKTASVFVLEKDRL
VKENNYRGHSDSVDQLCWHPTNPDLFVTASGDKTIRIWDVRTTKCIATVVTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SIVVPKENSSSYPELKPIQSINAHPSNCICIKFDPTGKYFATGSADALVSLWDVDELVCV
RCFSRLDWPVRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCDSPTFTVAWHPKR
PLLAYACDDKEGKYDNNREAGTVKLFGLPNDS
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcgtcgcagtattatcaagagatgcaggagagcttcaagaataacaacaaaagtcgt
gaattcccggctcacacagccaaagttcactcggtggcgtggagctgtgatggcaggagg
ctcgcttcgggctcttttgataaaacagccagcgtttttgttctggaaaaggaccgtttg
gtgaaagagaacaactacagaggtcacagtgacagtgttgatcagctctgctggcatcca
acaaacccagatctgttcgtcacagcttctggagacaagaccattcggatatgggacgtc
cgcaccaccaaatgcatcgccaccgtcgtcacaaaaggtgaaaacatcaacatctgctgg
agcccggacggtcaaaccatcgctgtaggaaacaaagatgatgtggtgaccttcatagat
gcaaagacgcaccgctccaaagcagaggagcagttcaagttcgaagtgaacgagatctct
tggaacaacgacaacgacatgttcttcctcacaaacggcaacggttgcatcaacattctg
agcatcgtggttccgaaggaaaactcatccagttacccagagctgaagcccatccagtcc
atcaatgctcacccgtctaactgcatctgcatcaagttcgaccccacggggaaatacttc
gcaacaggaagtgcagacgctctggtgtctctgtgggacgtggatgaactggtgtgcgtt
cgctgcttctccaggttggactggccagtgaggactctgagtttcagccatgatggaaag
atgttagcttcagcctctgaggatcacttcatcgacatcgctgaggtggagacgggagag
aagctgtgggaggtccagtgtgattctccgaccttcaccgtcgcctggcaccccaagagg
ccgctgctcgcctacgcctgcgacgacaaggagggcaaatatgacaacaaccgtgaggcg
ggcaccgtcaaactgttcggcctccctaatgactcctga

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